Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Gm18733-201ENSMUST00000173950 856 ntBASIC15.02■□□□□ -0
Ndc1Q8VCB1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ndc1Q8VCB1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ndc1Q8VCB1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Gm7506-201ENSMUST00000207758 815 ntBASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ndc1Q8VCB1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Gm6443-201ENSMUST00000203599 874 ntBASIC15□□□□□ -0.01
Ndc1Q8VCB1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ndc1Q8VCB1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Gm7862-201ENSMUST00000121461 292 ntBASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms