Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox21Q811W0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox21Q811W0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sox21Q811W0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.02□□□□□ -0.32
Sox21Q811W0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Sox21Q811W0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sox21Q811W0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sox21Q811W0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Gm27525-201ENSMUST00000184465 107 ntBASIC13.02□□□□□ -0.33
Sox21Q811W0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.02□□□□□ -0.33
Sox21Q811W0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.02□□□□□ -0.33
Sox21Q811W0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox21Q811W0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sox21Q811W0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox21Q811W0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Gm43514-201ENSMUST00000198852 424 ntBASIC13.01□□□□□ -0.33
Sox21Q811W0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.01□□□□□ -0.33
Sox21Q811W0 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.01□□□□□ -0.33
Sox21Q811W0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox21Q811W0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox21Q811W0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox21Q811W0 Ptprs-211ENSMUST00000223859 5588 ntBASIC13□□□□□ -0.33
Sox21Q811W0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox21Q811W0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox21Q811W0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox21Q811W0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox21Q811W0 Gm7862-201ENSMUST00000121461 292 ntBASIC13□□□□□ -0.33
Sox21Q811W0 Gm18733-201ENSMUST00000173950 856 ntBASIC13□□□□□ -0.33
Sox21Q811W0 Mir5131-201ENSMUST00000175426 93 ntBASIC13□□□□□ -0.33
Sox21Q811W0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13□□□□□ -0.33
Sox21Q811W0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13□□□□□ -0.33
Sox21Q811W0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13□□□□□ -0.33
Sox21Q811W0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13□□□□□ -0.33
Sox21Q811W0 Gm2651-201ENSMUST00000203560 838 ntBASIC13□□□□□ -0.33
Sox21Q811W0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox21Q811W0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms