Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
CTNND1O60716 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.95■■□□□ 1.1
CTNND1O60716 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.95■■□□□ 1.1
CTNND1O60716 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CTNND1O60716 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTNND1O60716 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.95■■□□□ 1.1
CTNND1O60716 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.95■■□□□ 1.1
CTNND1O60716 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 FEM1AP3-201ENST00000403722 1741 ntBASIC21.94■■□□□ 1.1
CTNND1O60716 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.94■■□□□ 1.1
CTNND1O60716 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 AL845331.1-201ENST00000424978 1190 ntBASIC21.94■■□□□ 1.1
CTNND1O60716 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.94■■□□□ 1.1
CTNND1O60716 FAAHP1-202ENST00000446499 1238 ntBASIC21.94■■□□□ 1.1
CTNND1O60716 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.94■■□□□ 1.1
CTNND1O60716 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.94■■□□□ 1.1
CTNND1O60716 TPSP2-201ENST00000561760 610 ntBASIC21.94■■□□□ 1.1
CTNND1O60716 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.94■■□□□ 1.1
CTNND1O60716 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CTNND1O60716 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTNND1O60716 KRT8P32-201ENST00000512863 1461 ntBASIC21.94■■□□□ 1.1
CTNND1O60716 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.94■■□□□ 1.1
CTNND1O60716 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.94■■□□□ 1.1
CTNND1O60716 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.93■■□□□ 1.1
CTNND1O60716 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.93■■□□□ 1.1
CTNND1O60716 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 FDX1P1-201ENST00000449115 551 ntBASIC21.93■■□□□ 1.1
CTNND1O60716 LINC01521-201ENST00000504184 1943 ntBASIC21.93■■□□□ 1.1
CTNND1O60716 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.93■■□□□ 1.1
CTNND1O60716 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CTNND1O60716 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CTNND1O60716 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.93■■□□□ 1.1
CTNND1O60716 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTNND1O60716 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTNND1O60716 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTNND1O60716 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CTNND1O60716 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.92■■□□□ 1.1
CTNND1O60716 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 KRT17P6-201ENST00000453795 1220 ntBASIC21.92■■□□□ 1.1
CTNND1O60716 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTNND1O60716 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTNND1O60716 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.92■■□□□ 1.1
CTNND1O60716 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTNND1O60716 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.91■■□□□ 1.1
CTNND1O60716 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.91■■□□□ 1.1
CTNND1O60716 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 TSPY19P-201ENST00000418461 509 ntBASIC21.91■■□□□ 1.1
CTNND1O60716 PVRIG2P-201ENST00000435460 978 ntBASIC21.91■■□□□ 1.1
CTNND1O60716 TSPY18P-201ENST00000441642 509 ntBASIC21.91■■□□□ 1.1
CTNND1O60716 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.91■■□□□ 1.1
CTNND1O60716 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.91■■□□□ 1.1
CTNND1O60716 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.91■■□□□ 1.1
CTNND1O60716 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.91■■□□□ 1.1
CTNND1O60716 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.91■■□□□ 1.1
CTNND1O60716 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.91■■□□□ 1.1
CTNND1O60716 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTNND1O60716 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.9■■□□□ 1.1
CTNND1O60716 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CTNND1O60716 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CTNND1O60716 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTNND1O60716 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms