Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SBNO1A3KN83 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SBNO1A3KN83 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SBNO1A3KN83 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 SLC25A1P1-201ENST00000528351 927 ntBASIC25.45■■□□□ 1.67
SBNO1A3KN83 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC25.45■■□□□ 1.67
SBNO1A3KN83 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.45■■□□□ 1.66
SBNO1A3KN83 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SBNO1A3KN83 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SBNO1A3KN83 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SBNO1A3KN83 AC008556.1-201ENST00000610908 2040 ntBASIC25.45■■□□□ 1.66
SBNO1A3KN83 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
SBNO1A3KN83 PBK-203ENST00000522944 1499 ntTSL 2 BASIC25.45■■□□□ 1.66
SBNO1A3KN83 CLDN5-201ENST00000403084 2357 ntBASIC25.45■■□□□ 1.66
SBNO1A3KN83 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SBNO1A3KN83 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.45■■□□□ 1.66
SBNO1A3KN83 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 TLE1-202ENST00000376484 666 ntTSL 3 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AL773604.1-201ENST00000617417 272 ntBASIC25.44■■□□□ 1.66
SBNO1A3KN83 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AL512353.2-201ENST00000448759 1962 ntBASIC25.44■■□□□ 1.66
SBNO1A3KN83 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 LINC01521-201ENST00000504184 1943 ntBASIC25.44■■□□□ 1.66
SBNO1A3KN83 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 TREX1-205ENST00000625293 1783 ntBASIC25.44■■□□□ 1.66
SBNO1A3KN83 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AC091607.1-201ENST00000490318 1060 ntBASIC25.44■■□□□ 1.66
SBNO1A3KN83 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SBNO1A3KN83 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC25.44■■□□□ 1.66
SBNO1A3KN83 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 TP73-202ENST00000354437 2140 ntTSL 5 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SBNO1A3KN83 NUS1P2-201ENST00000417358 873 ntBASIC25.43■■□□□ 1.66
SBNO1A3KN83 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SBNO1A3KN83 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SBNO1A3KN83 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC25.42■■□□□ 1.66
SBNO1A3KN83 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 MIR564-202ENST00000385049 94 ntBASIC25.41■■□□□ 1.66
SBNO1A3KN83 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 VENTXP7-201ENST00000475503 772 ntBASIC25.41■■□□□ 1.66
SBNO1A3KN83 GUSBP12-201ENST00000513727 720 ntBASIC25.41■■□□□ 1.66
SBNO1A3KN83 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 AC124864.1-201ENST00000623408 392 ntBASIC25.41■■□□□ 1.66
SBNO1A3KN83 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SBNO1A3KN83 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SBNO1A3KN83 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC25.4■■□□□ 1.66
SBNO1A3KN83 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SBNO1A3KN83 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SBNO1A3KN83 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SBNO1A3KN83 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms