Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 UBQLN4P1-201ENST00000461599 1801 ntBASIC17■□□□□ 0.31
TRAV17A0A0B4J275 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV17A0A0B4J275 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 AC034236.2-201ENST00000606662 1610 ntBASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 MIR3180-1-201ENST00000580374 94 ntBASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 MIR3180-3-201ENST00000584616 94 ntBASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV17A0A0B4J275 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 AP002383.4-201ENST00000442518 975 ntBASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 IRX1P1-201ENST00000438849 1838 ntBASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV17A0A0B4J275 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 KRT18P1-202ENST00000452408 1331 ntBASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 AC111152.3-201ENST00000569699 673 ntBASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV17A0A0B4J275 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms