Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-539P-201ENST00000516665 103 ntBASIC-5.36□□□□□ -3.27
IFT140Q96RY7 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.37□□□□□ -3.27
IFT140Q96RY7 RNU6-463P-201ENST00000384340 107 ntBASIC-5.37□□□□□ -3.27
IFT140Q96RY7 MT-TG-201ENST00000387429 68 ntBASIC-5.38□□□□□ -3.27
IFT140Q96RY7 AC110620.1-201ENST00000416042 228 ntBASIC-5.38□□□□□ -3.27
IFT140Q96RY7 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.39□□□□□ -3.27
IFT140Q96RY7 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.4□□□□□ -3.27
IFT140Q96RY7 RNU6-209P-201ENST00000384118 107 ntBASIC-5.4□□□□□ -3.27
IFT140Q96RY7 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.41□□□□□ -3.28
IFT140Q96RY7 RNU6-1045P-201ENST00000516321 107 ntBASIC-5.42□□□□□ -3.28
IFT140Q96RY7 RNU6-49P-201ENST00000384256 107 ntBASIC-5.44□□□□□ -3.28
IFT140Q96RY7 RNU4-33P-201ENST00000364316 85 ntBASIC-5.45□□□□□ -3.28
IFT140Q96RY7 MIR494-201ENST00000349529 81 ntBASIC-5.47□□□□□ -3.29
IFT140Q96RY7 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.47□□□□□ -3.29
IFT140Q96RY7 RNU6-808P-201ENST00000391233 108 ntBASIC-5.48□□□□□ -3.29
IFT140Q96RY7 AC114801.3-201ENST00000510231 177 ntBASIC-5.52□□□□□ -3.29
IFT140Q96RY7 RNU6-787P-201ENST00000384032 107 ntBASIC-5.53□□□□□ -3.3
IFT140Q96RY7 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.54□□□□□ -3.3
IFT140Q96RY7 RNU6-446P-201ENST00000362827 106 ntBASIC-5.56□□□□□ -3.3
IFT140Q96RY7 RNU6-147P-201ENST00000383983 107 ntBASIC-5.57□□□□□ -3.3
IFT140Q96RY7 Y_RNA.703-201ENST00000516846 111 ntBASIC-5.57□□□□□ -3.3
IFT140Q96RY7 MIR3133-201ENST00000583157 78 ntBASIC-5.57□□□□□ -3.3
IFT140Q96RY7 MIR450A2-201ENST00000385022 100 ntBASIC-5.58□□□□□ -3.3
IFT140Q96RY7 RNY4P13-201ENST00000384284 96 ntBASIC-5.61□□□□□ -3.31
IFT140Q96RY7 RNU6-81P-201ENST00000365608 104 ntBASIC-5.62□□□□□ -3.31
IFT140Q96RY7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.64□□□□□ -3.31
IFT140Q96RY7 RNU6-22P-201ENST00000384355 107 ntBASIC-5.65□□□□□ -3.31
IFT140Q96RY7 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.66□□□□□ -3.32
IFT140Q96RY7 RNA5SP449-201ENST00000516871 130 ntBASIC-5.66□□□□□ -3.32
IFT140Q96RY7 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.67□□□□□ -3.32
IFT140Q96RY7 RNU4-85P-201ENST00000364675 123 ntBASIC-5.68□□□□□ -3.32
IFT140Q96RY7 SNORD113-4-201ENST00000364802 75 ntBASIC-5.71□□□□□ -3.32
IFT140Q96RY7 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.72□□□□□ -3.33
IFT140Q96RY7 RNY4P30-201ENST00000410216 95 ntBASIC-5.73□□□□□ -3.33
IFT140Q96RY7 RNU6-313P-201ENST00000516317 112 ntBASIC-5.73□□□□□ -3.33
IFT140Q96RY7 RNU6-59P-201ENST00000384787 107 ntBASIC-5.75□□□□□ -3.33
IFT140Q96RY7 RNU6-838P-201ENST00000363399 108 ntBASIC-5.76□□□□□ -3.33
IFT140Q96RY7 RNU6-820P-201ENST00000384273 107 ntBASIC-5.78□□□□□ -3.34
IFT140Q96RY7 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.79□□□□□ -3.34
IFT140Q96RY7 RNU6-471P-201ENST00000383944 106 ntBASIC-5.79□□□□□ -3.34
IFT140Q96RY7 RNU6-406P-201ENST00000516470 107 ntBASIC-5.82□□□□□ -3.34
IFT140Q96RY7 RNA5SP89-201ENST00000410300 108 ntBASIC-5.83□□□□□ -3.34
IFT140Q96RY7 RNU6-1011P-201ENST00000384668 107 ntBASIC-5.83□□□□□ -3.34
IFT140Q96RY7 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.84□□□□□ -3.34
IFT140Q96RY7 RNU6-294P-201ENST00000364999 102 ntBASIC-5.87□□□□□ -3.35
IFT140Q96RY7 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.9□□□□□ -3.35
IFT140Q96RY7 RNU6-857P-201ENST00000515893 110 ntBASIC-5.91□□□□□ -3.36
IFT140Q96RY7 RNU6-986P-201ENST00000363133 102 ntBASIC-5.93□□□□□ -3.36
IFT140Q96RY7 RNU6-627P-201ENST00000364032 102 ntBASIC-5.93□□□□□ -3.36
IFT140Q96RY7 MIR3202-2-201ENST00000635980 79 ntBASIC-5.93□□□□□ -3.36
IFT140Q96RY7 RNU6-829P-201ENST00000363700 112 ntBASIC-5.95□□□□□ -3.36
IFT140Q96RY7 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.95□□□□□ -3.36
IFT140Q96RY7 MIR363-201ENST00000384840 75 ntBASIC-5.96□□□□□ -3.36
IFT140Q96RY7 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.98□□□□□ -3.37
IFT140Q96RY7 RNU6-919P-201ENST00000516731 104 ntBASIC-5.98□□□□□ -3.37
IFT140Q96RY7 MIR633-201ENST00000384821 98 ntBASIC-6□□□□□ -3.37
IFT140Q96RY7 Y_RNA.81-201ENST00000362997 102 ntBASIC-6.02□□□□□ -3.37
IFT140Q96RY7 RNU6-279P-201ENST00000391297 101 ntBASIC-6.02□□□□□ -3.37
IFT140Q96RY7 MIR1255A-201ENST00000408338 113 ntBASIC-6.05□□□□□ -3.38
IFT140Q96RY7 RNU6-215P-201ENST00000365169 102 ntBASIC-6.07□□□□□ -3.38
IFT140Q96RY7 SNORA26.2-201ENST00000390922 122 ntBASIC-6.07□□□□□ -3.38
IFT140Q96RY7 SNORD20-201ENST00000384550 80 ntBASIC-6.08□□□□□ -3.38
IFT140Q96RY7 Y_RNA.694-201ENST00000516677 117 ntBASIC-6.09□□□□□ -3.38
IFT140Q96RY7 AC090425.1-201ENST00000610007 140 ntBASIC-6.09□□□□□ -3.38
IFT140Q96RY7 RNU6-753P-201ENST00000363926 107 ntBASIC-6.14□□□□□ -3.39
IFT140Q96RY7 SNORD113-1-201ENST00000365321 69 ntBASIC-6.18□□□□□ -3.4
IFT140Q96RY7 RNU6-44P-201ENST00000384045 107 ntBASIC-6.19□□□□□ -3.4
IFT140Q96RY7 RNU6-916P-201ENST00000516088 109 ntBASIC-6.2□□□□□ -3.4
IFT140Q96RY7 RNU6-794P-201ENST00000517261 64 ntBASIC-6.2□□□□□ -3.4
IFT140Q96RY7 MIR4662A-201ENST00000637499 67 ntBASIC-6.2□□□□□ -3.4
IFT140Q96RY7 RNU6-153P-201ENST00000364422 104 ntBASIC-6.21□□□□□ -3.4
IFT140Q96RY7 RNU6-620P-201ENST00000384017 96 ntBASIC-6.22□□□□□ -3.4
IFT140Q96RY7 RNU6-930P-201ENST00000390938 100 ntBASIC-6.22□□□□□ -3.4
IFT140Q96RY7 Y_RNA.369-201ENST00000365568 117 ntBASIC-6.22□□□□□ -3.41
IFT140Q96RY7 RNU6-573P-201ENST00000383938 106 ntBASIC-6.23□□□□□ -3.41
IFT140Q96RY7 MIR5582-201ENST00000579697 68 ntBASIC-6.24□□□□□ -3.41
IFT140Q96RY7 AP001094.1-201ENST00000579805 193 ntBASIC-6.24□□□□□ -3.41
IFT140Q96RY7 AC079150.2-201ENST00000443733 78 ntBASIC-6.28□□□□□ -3.41
IFT140Q96RY7 MIR548F3-201ENST00000408509 87 ntBASIC-6.28□□□□□ -3.42
IFT140Q96RY7 MIR548M-201ENST00000408260 86 ntBASIC-6.34□□□□□ -3.42
IFT140Q96RY7 RNU6-936P-201ENST00000384005 107 ntBASIC-6.37□□□□□ -3.43
IFT140Q96RY7 RNA5SP225-201ENST00000410874 135 ntBASIC-6.38□□□□□ -3.43
IFT140Q96RY7 MIR3910-1-201ENST00000580936 111 ntBASIC-6.4□□□□□ -3.43
IFT140Q96RY7 SNORD78.1-201ENST00000390866 65 ntBASIC-6.43□□□□□ -3.44
IFT140Q96RY7 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.45□□□□□ -3.44
IFT140Q96RY7 SNORD73B-201ENST00000364394 72 ntBASIC-6.46□□□□□ -3.44
IFT140Q96RY7 SNORD111B-201ENST00000408587 80 ntBASIC-6.46□□□□□ -3.44
IFT140Q96RY7 RNY4P29-201ENST00000410801 97 ntBASIC-6.51□□□□□ -3.45
IFT140Q96RY7 AL606753.1-201ENST00000427435 87 ntBASIC-6.51□□□□□ -3.45
IFT140Q96RY7 AC125388.1-201ENST00000459631 156 ntBASIC-6.54□□□□□ -3.46
IFT140Q96RY7 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.55□□□□□ -3.46
IFT140Q96RY7 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.55□□□□□ -3.46
IFT140Q96RY7 RNU6-499P-201ENST00000365615 107 ntBASIC-6.58□□□□□ -3.46
IFT140Q96RY7 RNU6-485P-201ENST00000363475 107 ntBASIC-6.66□□□□□ -3.47
IFT140Q96RY7 DLEU2_4.2-201ENST00000616613 58 ntBASIC-6.7□□□□□ -3.48
IFT140Q96RY7 Y_RNA.15-201ENST00000362420 102 ntBASIC-6.72□□□□□ -3.48
IFT140Q96RY7 U6.103-201ENST00000637085 61 ntBASIC-6.74□□□□□ -3.49
IFT140Q96RY7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-6.75□□□□□ -3.49
IFT140Q96RY7 MIR3671-201ENST00000580455 88 ntBASIC-6.76□□□□□ -3.49
IFT140Q96RY7 AC099654.10-201ENST00000640395 161 ntBASIC-6.78□□□□□ -3.49
Retrieved 100 of 98,524 protein–RNA pairs in 1130.7 ms