Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.59□□□□□ -2.98
RPRD1AQ96P16 SNORD73B-201ENST00000364394 72 ntBASIC-3.6□□□□□ -2.99
RPRD1AQ96P16 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.61□□□□□ -2.99
RPRD1AQ96P16 AC110620.1-201ENST00000416042 228 ntBASIC-3.61□□□□□ -2.99
RPRD1AQ96P16 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.62□□□□□ -2.99
RPRD1AQ96P16 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.64□□□□□ -2.99
RPRD1AQ96P16 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.66□□□□□ -3
RPRD1AQ96P16 RNY4P29-201ENST00000410801 97 ntBASIC-3.67□□□□□ -3
RPRD1AQ96P16 MIR509-1-201ENST00000385265 94 ntBASIC-3.68□□□□□ -3
RPRD1AQ96P16 MIR509-2-201ENST00000390724 91 ntBASIC-3.68□□□□□ -3
RPRD1AQ96P16 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.69□□□□□ -3
RPRD1AQ96P16 SNORA26.2-201ENST00000390922 122 ntBASIC-3.69□□□□□ -3
RPRD1AQ96P16 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.7□□□□□ -3
RPRD1AQ96P16 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.7□□□□□ -3
RPRD1AQ96P16 RNA5SP170-201ENST00000517150 101 ntBASIC-3.7□□□□□ -3
RPRD1AQ96P16 MIR548X-201ENST00000580069 75 ntBASIC-3.7□□□□□ -3
RPRD1AQ96P16 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.72□□□□□ -3
RPRD1AQ96P16 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.73□□□□□ -3.01
RPRD1AQ96P16 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.73□□□□□ -3.01
RPRD1AQ96P16 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.74□□□□□ -3.01
RPRD1AQ96P16 RNU6-822P-201ENST00000362707 106 ntBASIC-3.74□□□□□ -3.01
RPRD1AQ96P16 RNA5SP225-201ENST00000410874 135 ntBASIC-3.74□□□□□ -3.01
RPRD1AQ96P16 RNA5SP106-201ENST00000517274 100 ntBASIC-3.76□□□□□ -3.01
RPRD1AQ96P16 SNORD78.1-201ENST00000390866 65 ntBASIC-3.77□□□□□ -3.01
RPRD1AQ96P16 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.77□□□□□ -3.01
RPRD1AQ96P16 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.77□□□□□ -3.01
RPRD1AQ96P16 SNORD114-13-201ENST00000364377 74 ntBASIC-3.78□□□□□ -3.01
RPRD1AQ96P16 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.79□□□□□ -3.02
RPRD1AQ96P16 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.79□□□□□ -3.02
RPRD1AQ96P16 AC139453.2-201ENST00000487255 133 ntBASIC-3.79□□□□□ -3.02
RPRD1AQ96P16 AL359920.1-201ENST00000618332 176 ntBASIC-3.79□□□□□ -3.02
RPRD1AQ96P16 RNU6-737P-201ENST00000365370 107 ntBASIC-3.82□□□□□ -3.02
RPRD1AQ96P16 RNY4P10-201ENST00000365571 96 ntBASIC-3.82□□□□□ -3.02
RPRD1AQ96P16 RNU6-987P-201ENST00000384759 104 ntBASIC-3.83□□□□□ -3.02
RPRD1AQ96P16 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.83□□□□□ -3.02
RPRD1AQ96P16 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.84□□□□□ -3.02
RPRD1AQ96P16 RNU6-776P-201ENST00000364403 104 ntBASIC-3.84□□□□□ -3.02
RPRD1AQ96P16 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.84□□□□□ -3.02
RPRD1AQ96P16 RNU6-471P-201ENST00000383944 106 ntBASIC-3.84□□□□□ -3.02
RPRD1AQ96P16 MIR4662A-201ENST00000637499 67 ntBASIC-3.85□□□□□ -3.03
RPRD1AQ96P16 RNU6-446P-201ENST00000362827 106 ntBASIC-3.87□□□□□ -3.03
RPRD1AQ96P16 RNA5SP224-201ENST00000365069 126 ntBASIC-3.87□□□□□ -3.03
RPRD1AQ96P16 RNU6-854P-201ENST00000364036 107 ntBASIC-3.88□□□□□ -3.03
RPRD1AQ96P16 MIR656-201ENST00000385224 78 ntBASIC-3.89□□□□□ -3.03
RPRD1AQ96P16 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.89□□□□□ -3.03
RPRD1AQ96P16 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.9□□□□□ -3.03
RPRD1AQ96P16 MIR4317-201ENST00000637586 65 ntBASIC-3.9□□□□□ -3.03
RPRD1AQ96P16 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.91□□□□□ -3.04
RPRD1AQ96P16 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.92□□□□□ -3.04
RPRD1AQ96P16 SNORD45C-201ENST00000383893 79 ntBASIC-3.94□□□□□ -3.04
RPRD1AQ96P16 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.94□□□□□ -3.04
RPRD1AQ96P16 AC114801.3-201ENST00000510231 177 ntBASIC-3.96□□□□□ -3.04
RPRD1AQ96P16 SNORD115.2-201ENST00000391126 59 ntBASIC-3.98□□□□□ -3.05
RPRD1AQ96P16 MIR548H4-201ENST00000408689 111 ntBASIC-3.98□□□□□ -3.05
RPRD1AQ96P16 RNU6-1340P-201ENST00000384438 107 ntBASIC-4□□□□□ -3.05
RPRD1AQ96P16 RNU6-836P-201ENST00000362920 107 ntBASIC-4.01□□□□□ -3.05
RPRD1AQ96P16 SNORD115-45-201ENST00000391078 81 ntBASIC-4.01□□□□□ -3.05
RPRD1AQ96P16 SNORD113-4-201ENST00000364802 75 ntBASIC-4.02□□□□□ -3.05
RPRD1AQ96P16 MIR1302-4-201ENST00000408701 150 ntBASIC-4.02□□□□□ -3.05
RPRD1AQ96P16 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.02□□□□□ -3.05
RPRD1AQ96P16 RNU4-33P-201ENST00000364316 85 ntBASIC-4.05□□□□□ -3.06
RPRD1AQ96P16 MIR124-1-201ENST00000385275 85 ntBASIC-4.05□□□□□ -3.06
RPRD1AQ96P16 MIR548AL-201ENST00000578416 97 ntBASIC-4.06□□□□□ -3.06
RPRD1AQ96P16 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.11□□□□□ -3.07
RPRD1AQ96P16 RNU6-829P-201ENST00000363700 112 ntBASIC-4.13□□□□□ -3.07
RPRD1AQ96P16 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.14□□□□□ -3.07
RPRD1AQ96P16 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.15□□□□□ -3.07
RPRD1AQ96P16 MIR633-201ENST00000384821 98 ntBASIC-4.15□□□□□ -3.07
RPRD1AQ96P16 RNU6-788P-201ENST00000390967 104 ntBASIC-4.15□□□□□ -3.07
RPRD1AQ96P16 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.16□□□□□ -3.08
RPRD1AQ96P16 MIR548AH-201ENST00000637109 76 ntBASIC-4.16□□□□□ -3.08
RPRD1AQ96P16 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.17□□□□□ -3.08
RPRD1AQ96P16 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.2□□□□□ -3.08
RPRD1AQ96P16 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.21□□□□□ -3.08
RPRD1AQ96P16 RNU6-665P-201ENST00000384639 107 ntBASIC-4.23□□□□□ -3.09
RPRD1AQ96P16 MIR545-201ENST00000385085 106 ntBASIC-4.23□□□□□ -3.09
RPRD1AQ96P16 RNU6-808P-201ENST00000391233 108 ntBASIC-4.29□□□□□ -3.1
RPRD1AQ96P16 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.31□□□□□ -3.1
RPRD1AQ96P16 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.33□□□□□ -3.1
RPRD1AQ96P16 RNU6-422P-201ENST00000384632 107 ntBASIC-4.35□□□□□ -3.11
RPRD1AQ96P16 AC079150.2-201ENST00000443733 78 ntBASIC-4.35□□□□□ -3.11
RPRD1AQ96P16 RNU6-838P-201ENST00000363399 108 ntBASIC-4.37□□□□□ -3.11
RPRD1AQ96P16 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.38□□□□□ -3.11
RPRD1AQ96P16 AC125388.1-201ENST00000459631 156 ntBASIC-4.41□□□□□ -3.12
RPRD1AQ96P16 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.46□□□□□ -3.12
RPRD1AQ96P16 RNU6-59P-201ENST00000384787 107 ntBASIC-4.48□□□□□ -3.13
RPRD1AQ96P16 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.51□□□□□ -3.13
RPRD1AQ96P16 RNU6-986P-201ENST00000363133 102 ntBASIC-4.53□□□□□ -3.13
RPRD1AQ96P16 RNU6-753P-201ENST00000363926 107 ntBASIC-4.58□□□□□ -3.14
RPRD1AQ96P16 RNU6-499P-201ENST00000365615 107 ntBASIC-4.6□□□□□ -3.15
RPRD1AQ96P16 RNU6-936P-201ENST00000384005 107 ntBASIC-4.64□□□□□ -3.15
RPRD1AQ96P16 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.65□□□□□ -3.15
RPRD1AQ96P16 RNY4P13-201ENST00000384284 96 ntBASIC-4.68□□□□□ -3.16
RPRD1AQ96P16 RNU6-930P-201ENST00000390938 100 ntBASIC-4.7□□□□□ -3.16
RPRD1AQ96P16 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.71□□□□□ -3.16
RPRD1AQ96P16 RNA5SP449-201ENST00000516871 130 ntBASIC-4.72□□□□□ -3.17
RPRD1AQ96P16 MIR548F3-201ENST00000408509 87 ntBASIC-4.73□□□□□ -3.17
RPRD1AQ96P16 RNU6-638P-201ENST00000516582 104 ntBASIC-4.73□□□□□ -3.17
RPRD1AQ96P16 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.78□□□□□ -3.17
RPRD1AQ96P16 RNU4-85P-201ENST00000364675 123 ntBASIC-4.87□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms