Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 MIR124-1-201ENST00000385275 85 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 SNORD20-201ENST00000384550 80 ntBASIC-0.74□□□□□ -2.53
SYNE1Q8NF91 MIR3202-2-201ENST00000635980 79 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 MIR488-201ENST00000365739 83 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 MIR3133-201ENST00000583157 78 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 RNU6-871P-201ENST00000516122 100 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 AP001094.1-201ENST00000579805 193 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 MIR1254-1-201ENST00000408257 97 ntBASIC-0.75□□□□□ -2.53
SYNE1Q8NF91 RNU6-215P-201ENST00000365169 102 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 MIR548AH-201ENST00000637109 76 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 RNU6-242P-201ENST00000384359 107 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 SNORD45C-201ENST00000383893 79 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 MIR656-201ENST00000385224 78 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 RNU6-787P-201ENST00000384032 107 ntBASIC-0.76□□□□□ -2.53
SYNE1Q8NF91 RNU6-471P-201ENST00000383944 106 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 AC110620.1-201ENST00000416042 228 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 MIR494-201ENST00000349529 81 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 RNU6-742P-201ENST00000365289 107 ntBASIC-0.77□□□□□ -2.53
SYNE1Q8NF91 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.78□□□□□ -2.53
SYNE1Q8NF91 MIR545-201ENST00000385085 106 ntBASIC-0.78□□□□□ -2.53
SYNE1Q8NF91 RNU6-808P-201ENST00000391233 108 ntBASIC-0.78□□□□□ -2.53
SYNE1Q8NF91 IGLL4P-201ENST00000614590 133 ntBASIC-0.78□□□□□ -2.53
SYNE1Q8NF91 RNU6-81P-201ENST00000365608 104 ntBASIC-0.78□□□□□ -2.53
SYNE1Q8NF91 RNU4-85P-201ENST00000364675 123 ntBASIC-0.78□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.79□□□□□ -2.54
SYNE1Q8NF91 MIR1255A-201ENST00000408338 113 ntBASIC-0.79□□□□□ -2.54
SYNE1Q8NF91 RNU6-44P-201ENST00000384045 107 ntBASIC-0.79□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.79□□□□□ -2.54
SYNE1Q8NF91 RNU4-33P-201ENST00000364316 85 ntBASIC-0.79□□□□□ -2.54
SYNE1Q8NF91 RNU6-422P-201ENST00000384632 107 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 RNU6-539P-201ENST00000516665 103 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 RNY4P30-201ENST00000410216 95 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 RNU6-279P-201ENST00000391297 101 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 RNA5SP89-201ENST00000410300 108 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 MIR548AL-201ENST00000578416 97 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.8□□□□□ -2.54
SYNE1Q8NF91 MIR1302-4-201ENST00000408701 150 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 SNORD78.1-201ENST00000390866 65 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 MIR3910-1-201ENST00000580936 111 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 RNU6-406P-201ENST00000516470 107 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 SNORA26.2-201ENST00000390922 122 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 MIR3938-201ENST00000582157 103 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 MIR548H4-201ENST00000408689 111 ntBASIC-0.81□□□□□ -2.54
SYNE1Q8NF91 RNU6-838P-201ENST00000363399 108 ntBASIC-0.82□□□□□ -2.54
SYNE1Q8NF91 RNU6-788P-201ENST00000390967 104 ntBASIC-0.82□□□□□ -2.54
SYNE1Q8NF91 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.82□□□□□ -2.54
SYNE1Q8NF91 RNU6-446P-201ENST00000362827 106 ntBASIC-0.82□□□□□ -2.54
SYNE1Q8NF91 SNORD113-4-201ENST00000364802 75 ntBASIC-0.82□□□□□ -2.54
SYNE1Q8NF91 AL606753.1-201ENST00000427435 87 ntBASIC-0.83□□□□□ -2.54
SYNE1Q8NF91 AC090425.1-201ENST00000610007 140 ntBASIC-0.83□□□□□ -2.54
SYNE1Q8NF91 MIR450A2-201ENST00000385022 100 ntBASIC-0.83□□□□□ -2.54
SYNE1Q8NF91 MIR3671-201ENST00000580455 88 ntBASIC-0.84□□□□□ -2.54
SYNE1Q8NF91 Y_RNA.15-201ENST00000362420 102 ntBASIC-0.84□□□□□ -2.54
SYNE1Q8NF91 AC099654.10-201ENST00000640395 161 ntBASIC-0.84□□□□□ -2.54
SYNE1Q8NF91 MIR5582-201ENST00000579697 68 ntBASIC-0.84□□□□□ -2.54
SYNE1Q8NF91 MIR4511-201ENST00000582784 87 ntBASIC-0.84□□□□□ -2.54
SYNE1Q8NF91 RNU6-986P-201ENST00000363133 102 ntBASIC-0.85□□□□□ -2.55
SYNE1Q8NF91 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.85□□□□□ -2.55
SYNE1Q8NF91 RNU6-836P-201ENST00000362920 107 ntBASIC-0.85□□□□□ -2.55
SYNE1Q8NF91 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.86□□□□□ -2.55
SYNE1Q8NF91 RNU6-857P-201ENST00000515893 110 ntBASIC-0.86□□□□□ -2.55
SYNE1Q8NF91 MIR4662A-201ENST00000637499 67 ntBASIC-0.86□□□□□ -2.55
SYNE1Q8NF91 SNORD115.2-201ENST00000391126 59 ntBASIC-0.86□□□□□ -2.55
SYNE1Q8NF91 RNU6-153P-201ENST00000364422 104 ntBASIC-0.87□□□□□ -2.55
SYNE1Q8NF91 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.87□□□□□ -2.55
SYNE1Q8NF91 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.88□□□□□ -2.55
SYNE1Q8NF91 MIR3668-201ENST00000582138 75 ntBASIC-0.88□□□□□ -2.55
SYNE1Q8NF91 RNU6-499P-201ENST00000365615 107 ntBASIC-0.88□□□□□ -2.55
SYNE1Q8NF91 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.88□□□□□ -2.55
SYNE1Q8NF91 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.89□□□□□ -2.55
SYNE1Q8NF91 AC114801.3-201ENST00000510231 177 ntBASIC-0.89□□□□□ -2.55
SYNE1Q8NF91 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.89□□□□□ -2.55
SYNE1Q8NF91 RNU6-627P-201ENST00000364032 102 ntBASIC-0.89□□□□□ -2.55
SYNE1Q8NF91 snosnR66.1-201ENST00000391095 99 ntBASIC-0.89□□□□□ -2.55
SYNE1Q8NF91 MT-TR-201ENST00000387439 65 ntBASIC-0.9□□□□□ -2.55
SYNE1Q8NF91 U6.111-201ENST00000636093 83 ntBASIC-0.91□□□□□ -2.55
SYNE1Q8NF91 RNU6-573P-201ENST00000383938 106 ntBASIC-0.92□□□□□ -2.56
SYNE1Q8NF91 RNU6-753P-201ENST00000363926 107 ntBASIC-0.92□□□□□ -2.56
SYNE1Q8NF91 RNU6-829P-201ENST00000363700 112 ntBASIC-0.93□□□□□ -2.56
SYNE1Q8NF91 RNA5SP225-201ENST00000410874 135 ntBASIC-0.93□□□□□ -2.56
SYNE1Q8NF91 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.93□□□□□ -2.56
SYNE1Q8NF91 RNU6-936P-201ENST00000384005 107 ntBASIC-0.93□□□□□ -2.56
SYNE1Q8NF91 RNY4P29-201ENST00000410801 97 ntBASIC-0.94□□□□□ -2.56
SYNE1Q8NF91 RNU6-59P-201ENST00000384787 107 ntBASIC-0.94□□□□□ -2.56
SYNE1Q8NF91 RNU6-620P-201ENST00000384017 96 ntBASIC-0.96□□□□□ -2.56
SYNE1Q8NF91 RNU6-930P-201ENST00000390938 100 ntBASIC-0.97□□□□□ -2.56
SYNE1Q8NF91 RNY4P19-201ENST00000362530 96 ntBASIC-0.97□□□□□ -2.57
SYNE1Q8NF91 U6.103-201ENST00000637085 61 ntBASIC-0.98□□□□□ -2.57
SYNE1Q8NF91 SNORD73B-201ENST00000364394 72 ntBASIC-0.98□□□□□ -2.57
SYNE1Q8NF91 RNU6-1024P-201ENST00000384199 107 ntBASIC-0.98□□□□□ -2.57
SYNE1Q8NF91 RNU6-133P-201ENST00000383989 107 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms