Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 AC103706.3-201ENST00000636297 85 ntBASIC-1.79□□□□□ -2.7
RPUSD3Q6P087 RNU6-836P-201ENST00000362920 107 ntBASIC-1.8□□□□□ -2.7
RPUSD3Q6P087 MT-TR-201ENST00000387439 65 ntBASIC-1.8□□□□□ -2.7
RPUSD3Q6P087 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 RNU6-822P-201ENST00000362707 106 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 SNORD30.1-201ENST00000391309 70 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 RNA5SP89-201ENST00000410300 108 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 U7.4-201ENST00000614961 63 ntBASIC-1.81□□□□□ -2.7
RPUSD3Q6P087 RNU6-215P-201ENST00000365169 102 ntBASIC-1.83□□□□□ -2.7
RPUSD3Q6P087 RNU6-987P-201ENST00000384759 104 ntBASIC-1.83□□□□□ -2.7
RPUSD3Q6P087 MIR548AL-201ENST00000578416 97 ntBASIC-1.83□□□□□ -2.7
RPUSD3Q6P087 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.84□□□□□ -2.7
RPUSD3Q6P087 RNU6-294P-201ENST00000364999 102 ntBASIC-1.85□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.85□□□□□ -2.71
RPUSD3Q6P087 RNU6-539P-201ENST00000516665 103 ntBASIC-1.85□□□□□ -2.71
RPUSD3Q6P087 SNORD113-1-201ENST00000365321 69 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 RNY4P10-201ENST00000365571 96 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 RNU6-665P-201ENST00000384639 107 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.86□□□□□ -2.71
RPUSD3Q6P087 SNORD115.2-201ENST00000391126 59 ntBASIC-1.87□□□□□ -2.71
RPUSD3Q6P087 RNU6-808P-201ENST00000391233 108 ntBASIC-1.87□□□□□ -2.71
RPUSD3Q6P087 MIR4317-201ENST00000637586 65 ntBASIC-1.87□□□□□ -2.71
RPUSD3Q6P087 RNU6-153P-201ENST00000364422 104 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 SNORD20-201ENST00000384550 80 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 MIR450A2-201ENST00000385022 100 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 RNU6-406P-201ENST00000516470 107 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 MIR3910-1-201ENST00000580936 111 ntBASIC-1.88□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.89□□□□□ -2.71
RPUSD3Q6P087 RNU6-986P-201ENST00000363133 102 ntBASIC-1.89□□□□□ -2.71
RPUSD3Q6P087 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.89□□□□□ -2.71
RPUSD3Q6P087 RNU6-242P-201ENST00000384359 107 ntBASIC-1.89□□□□□ -2.71
RPUSD3Q6P087 RNU4-33P-201ENST00000364316 85 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 RNU6-776P-201ENST00000364403 104 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 RNU6-59P-201ENST00000384787 107 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 RNU6-857P-201ENST00000515893 110 ntBASIC-1.9□□□□□ -2.71
RPUSD3Q6P087 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.91□□□□□ -2.72
RPUSD3Q6P087 RNU6-829P-201ENST00000363700 112 ntBASIC-1.92□□□□□ -2.72
RPUSD3Q6P087 RNU6-44P-201ENST00000384045 107 ntBASIC-1.92□□□□□ -2.72
RPUSD3Q6P087 RNU6-279P-201ENST00000391297 101 ntBASIC-1.92□□□□□ -2.72
RPUSD3Q6P087 RNY4P30-201ENST00000410216 95 ntBASIC-1.93□□□□□ -2.72
RPUSD3Q6P087 RNU6-919P-201ENST00000516731 104 ntBASIC-1.94□□□□□ -2.72
RPUSD3Q6P087 RNU6-471P-201ENST00000383944 106 ntBASIC-1.95□□□□□ -2.72
RPUSD3Q6P087 MIR1255A-201ENST00000408338 113 ntBASIC-1.95□□□□□ -2.72
RPUSD3Q6P087 AC114801.3-201ENST00000510231 177 ntBASIC-1.95□□□□□ -2.72
RPUSD3Q6P087 RNU6-871P-201ENST00000516122 100 ntBASIC-1.96□□□□□ -2.72
RPUSD3Q6P087 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.97□□□□□ -2.72
RPUSD3Q6P087 RNU6-820P-201ENST00000384273 107 ntBASIC-1.97□□□□□ -2.72
RPUSD3Q6P087 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.97□□□□□ -2.72
RPUSD3Q6P087 MIR633-201ENST00000384821 98 ntBASIC-1.97□□□□□ -2.72
RPUSD3Q6P087 RNU6-573P-201ENST00000383938 106 ntBASIC-1.98□□□□□ -2.73
RPUSD3Q6P087 RNA5SP225-201ENST00000410874 135 ntBASIC-1.98□□□□□ -2.73
RPUSD3Q6P087 MIR5582-201ENST00000579697 68 ntBASIC-1.98□□□□□ -2.73
RPUSD3Q6P087 RNU6-838P-201ENST00000363399 108 ntBASIC-1.99□□□□□ -2.73
RPUSD3Q6P087 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.99□□□□□ -2.73
RPUSD3Q6P087 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.01□□□□□ -2.73
RPUSD3Q6P087 RNU6-422P-201ENST00000384632 107 ntBASIC-2.01□□□□□ -2.73
RPUSD3Q6P087 MIR3202-2-201ENST00000635980 79 ntBASIC-2.01□□□□□ -2.73
RPUSD3Q6P087 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.02□□□□□ -2.73
RPUSD3Q6P087 MIR548F3-201ENST00000408509 87 ntBASIC-2.03□□□□□ -2.73
RPUSD3Q6P087 RNA5SP449-201ENST00000516871 130 ntBASIC-2.03□□□□□ -2.73
RPUSD3Q6P087 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.04□□□□□ -2.74
RPUSD3Q6P087 MIR4679-1-201ENST00000637619 75 ntBASIC-2.04□□□□□ -2.74
RPUSD3Q6P087 SNORD73B-201ENST00000364394 72 ntBASIC-2.06□□□□□ -2.74
RPUSD3Q6P087 AC079150.2-201ENST00000443733 78 ntBASIC-2.06□□□□□ -2.74
RPUSD3Q6P087 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.07□□□□□ -2.74
RPUSD3Q6P087 RNU4-85P-201ENST00000364675 123 ntBASIC-2.07□□□□□ -2.74
RPUSD3Q6P087 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.07□□□□□ -2.74
RPUSD3Q6P087 RNY4P29-201ENST00000410801 97 ntBASIC-2.07□□□□□ -2.74
RPUSD3Q6P087 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.08□□□□□ -2.74
RPUSD3Q6P087 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.08□□□□□ -2.74
RPUSD3Q6P087 SNORA26.2-201ENST00000390922 122 ntBASIC-2.08□□□□□ -2.74
RPUSD3Q6P087 AL606753.1-201ENST00000427435 87 ntBASIC-2.08□□□□□ -2.74
RPUSD3Q6P087 SNORD78.1-201ENST00000390866 65 ntBASIC-2.1□□□□□ -2.75
RPUSD3Q6P087 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.1□□□□□ -2.75
RPUSD3Q6P087 RNU6-753P-201ENST00000363926 107 ntBASIC-2.13□□□□□ -2.75
RPUSD3Q6P087 AL603908.1-201ENST00000406098 201 ntBASIC-2.15□□□□□ -2.75
RPUSD3Q6P087 RNU6-930P-201ENST00000390938 100 ntBASIC-2.17□□□□□ -2.76
RPUSD3Q6P087 RNY4P13-201ENST00000384284 96 ntBASIC-2.18□□□□□ -2.76
RPUSD3Q6P087 SNORD111B-201ENST00000408587 80 ntBASIC-2.2□□□□□ -2.76
RPUSD3Q6P087 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.21□□□□□ -2.76
RPUSD3Q6P087 RNU6-936P-201ENST00000384005 107 ntBASIC-2.21□□□□□ -2.76
RPUSD3Q6P087 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
RPUSD3Q6P087 MIR4662A-201ENST00000637499 67 ntBASIC-2.21□□□□□ -2.76
RPUSD3Q6P087 RNA5SP170-201ENST00000517150 101 ntBASIC-2.24□□□□□ -2.77
RPUSD3Q6P087 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.24□□□□□ -2.77
RPUSD3Q6P087 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.27□□□□□ -2.77
RPUSD3Q6P087 RNU6-499P-201ENST00000365615 107 ntBASIC-2.28□□□□□ -2.77
RPUSD3Q6P087 RNU6-485P-201ENST00000363475 107 ntBASIC-2.29□□□□□ -2.78
RPUSD3Q6P087 RNU6-620P-201ENST00000384017 96 ntBASIC-2.29□□□□□ -2.78
RPUSD3Q6P087 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms