Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SNORD116-14-201ENST00000383894 92 ntBASIC-1.44□□□□□ -2.64
ABCA4P78363 SNORD116-17-201ENST00000383929 92 ntBASIC-1.44□□□□□ -2.64
ABCA4P78363 SNORD116-15-201ENST00000384445 92 ntBASIC-1.44□□□□□ -2.64
ABCA4P78363 SNORD116-19-201ENST00000384729 92 ntBASIC-1.44□□□□□ -2.64
ABCA4P78363 MIR3908-201ENST00000579798 126 ntBASIC-1.44□□□□□ -2.64
ABCA4P78363 RNU6-836P-201ENST00000362920 107 ntBASIC-1.45□□□□□ -2.64
ABCA4P78363 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.45□□□□□ -2.64
ABCA4P78363 RNU6-419P-201ENST00000517030 63 ntBASIC-1.45□□□□□ -2.64
ABCA4P78363 RNU6-620P-201ENST00000384017 96 ntBASIC-1.45□□□□□ -2.64
ABCA4P78363 RNU6-122P-201ENST00000516818 107 ntBASIC-1.45□□□□□ -2.64
ABCA4P78363 RNU6-471P-201ENST00000383944 106 ntBASIC-1.46□□□□□ -2.64
ABCA4P78363 MIR568-201ENST00000385036 95 ntBASIC-1.46□□□□□ -2.64
ABCA4P78363 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.46□□□□□ -2.64
ABCA4P78363 AC008267.6-201ENST00000441664 139 ntBASIC-1.46□□□□□ -2.64
ABCA4P78363 RNU6-886P-201ENST00000384319 105 ntBASIC-1.47□□□□□ -2.64
ABCA4P78363 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.47□□□□□ -2.64
ABCA4P78363 AL365222.1-201ENST00000614661 98 ntBASIC-1.47□□□□□ -2.64
ABCA4P78363 MIR548S-201ENST00000581352 82 ntBASIC-1.48□□□□□ -2.65
ABCA4P78363 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 RNU7-120P-201ENST00000459334 63 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 RNU6-327P-201ENST00000516270 127 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 U6.111-201ENST00000636093 83 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 RNU6-838P-201ENST00000363399 108 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 RNU6-930P-201ENST00000390938 100 ntBASIC-1.49□□□□□ -2.65
ABCA4P78363 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.5□□□□□ -2.65
ABCA4P78363 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.51□□□□□ -2.65
ABCA4P78363 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.51□□□□□ -2.65
ABCA4P78363 MIR1245B-201ENST00000636115 69 ntBASIC-1.51□□□□□ -2.65
ABCA4P78363 RNU6-738P-201ENST00000384531 106 ntBASIC-1.52□□□□□ -2.65
ABCA4P78363 AC103706.3-201ENST00000636297 85 ntBASIC-1.52□□□□□ -2.65
ABCA4P78363 RNU6-936P-201ENST00000384005 107 ntBASIC-1.53□□□□□ -2.65
ABCA4P78363 RNA5SP89-201ENST00000410300 108 ntBASIC-1.53□□□□□ -2.65
ABCA4P78363 RNU6-463P-201ENST00000384340 107 ntBASIC-1.54□□□□□ -2.66
ABCA4P78363 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.54□□□□□ -2.66
ABCA4P78363 MIR3202-2-201ENST00000635980 79 ntBASIC-1.54□□□□□ -2.66
ABCA4P78363 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.55□□□□□ -2.66
ABCA4P78363 RNU6-871P-201ENST00000516122 100 ntBASIC-1.55□□□□□ -2.66
ABCA4P78363 RNU6-892P-201ENST00000410335 99 ntBASIC-1.55□□□□□ -2.66
ABCA4P78363 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 SNORD30.1-201ENST00000391309 70 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 RNU6-627P-201ENST00000364032 102 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 RNU6-22P-201ENST00000384355 107 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.56□□□□□ -2.66
ABCA4P78363 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 RNU6-820P-201ENST00000384273 107 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 MIR633-201ENST00000384821 98 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 SNORD78.1-201ENST00000390866 65 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 RNU6-380P-201ENST00000410207 107 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 RNU6-857P-201ENST00000515893 110 ntBASIC-1.57□□□□□ -2.66
ABCA4P78363 AP000770.2-201ENST00000623694 100 ntBASIC-1.58□□□□□ -2.66
ABCA4P78363 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.59□□□□□ -2.66
ABCA4P78363 SNORD111B-201ENST00000408587 80 ntBASIC-1.59□□□□□ -2.66
ABCA4P78363 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.59□□□□□ -2.66
ABCA4P78363 RNU6-753P-201ENST00000363926 107 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 RNY1P5-201ENST00000383890 115 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 RNU6-242P-201ENST00000384359 107 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 SNORD20-201ENST00000384550 80 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 MIR450A2-201ENST00000385022 100 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 RNU6-919P-201ENST00000516731 104 ntBASIC-1.6□□□□□ -2.67
ABCA4P78363 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.61□□□□□ -2.67
ABCA4P78363 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.61□□□□□ -2.67
ABCA4P78363 MIR548F3-201ENST00000408509 87 ntBASIC-1.61□□□□□ -2.67
ABCA4P78363 RNY4P19-201ENST00000362530 96 ntBASIC-1.61□□□□□ -2.67
ABCA4P78363 RNU6-32P-201ENST00000383948 107 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 RNU6-13P-201ENST00000384248 107 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 RNU6-12P-201ENST00000384604 107 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 RNU6-41P-201ENST00000384741 107 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 MIR3671-201ENST00000580455 88 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 U7.4-201ENST00000614961 63 ntBASIC-1.62□□□□□ -2.67
ABCA4P78363 MIR1302-3-201ENST00000408128 138 ntBASIC-1.63□□□□□ -2.67
ABCA4P78363 MIR5582-201ENST00000579697 68 ntBASIC-1.63□□□□□ -2.67
ABCA4P78363 AL606753.1-201ENST00000427435 87 ntBASIC-1.63□□□□□ -2.67
ABCA4P78363 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.63□□□□□ -2.67
ABCA4P78363 RNU6-614P-201ENST00000384369 107 ntBASIC-1.64□□□□□ -2.67
ABCA4P78363 U6.59-201ENST00000615686 107 ntBASIC-1.64□□□□□ -2.67
ABCA4P78363 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.65□□□□□ -2.67
ABCA4P78363 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.65□□□□□ -2.67
ABCA4P78363 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.66□□□□□ -2.68
ABCA4P78363 RNU6-499P-201ENST00000365615 107 ntBASIC-1.66□□□□□ -2.68
ABCA4P78363 IGLL4P-201ENST00000614590 133 ntBASIC-1.67□□□□□ -2.68
ABCA4P78363 AC079150.2-201ENST00000443733 78 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 MIR3910-1-201ENST00000580936 111 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 RNU6-81P-201ENST00000365608 104 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 RNU6-133P-201ENST00000383989 107 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 MIR4503-201ENST00000582187 83 ntBASIC-1.68□□□□□ -2.68
ABCA4P78363 U6.103-201ENST00000637085 61 ntBASIC-1.69□□□□□ -2.68
ABCA4P78363 RNU6-406P-201ENST00000516470 107 ntBASIC-1.69□□□□□ -2.68
ABCA4P78363 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.7□□□□□ -2.68
ABCA4P78363 RNY4P29-201ENST00000410801 97 ntBASIC-1.7□□□□□ -2.68
ABCA4P78363 RNU6-44P-201ENST00000384045 107 ntBASIC-1.72□□□□□ -2.68
ABCA4P78363 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.72□□□□□ -2.68
ABCA4P78363 RNU6-724P-201ENST00000390958 105 ntBASIC-1.74□□□□□ -2.69
ABCA4P78363 AC125388.1-201ENST00000459631 156 ntBASIC-1.74□□□□□ -2.69
ABCA4P78363 MIR3133-201ENST00000583157 78 ntBASIC-1.74□□□□□ -2.69
ABCA4P78363 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
ABCA4P78363 MTND4LP19-201ENST00000403051 166 ntBASIC-1.75□□□□□ -2.69
ABCA4P78363 SNORD73B-201ENST00000364394 72 ntBASIC-1.77□□□□□ -2.69
ABCA4P78363 AP001094.1-201ENST00000579805 193 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms