Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SNORA25.4-201ENST00000363666 124 ntBASIC-2.82□□□□□ -2.86
CLDN6P56747 SNORA40.13-201ENST00000516379 120 ntBASIC-2.82□□□□□ -2.86
CLDN6P56747 MIR450A1-201ENST00000362262 91 ntBASIC-2.83□□□□□ -2.86
CLDN6P56747 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.83□□□□□ -2.86
CLDN6P56747 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.83□□□□□ -2.86
CLDN6P56747 MIR4712-201ENST00000583750 82 ntBASIC-2.83□□□□□ -2.86
CLDN6P56747 MIR4719-201ENST00000585233 84 ntBASIC-2.83□□□□□ -2.86
CLDN6P56747 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.84□□□□□ -2.86
CLDN6P56747 AL365222.1-201ENST00000614661 98 ntBASIC-2.84□□□□□ -2.86
CLDN6P56747 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.85□□□□□ -2.87
CLDN6P56747 RNU6-634P-201ENST00000459134 106 ntBASIC-2.85□□□□□ -2.87
CLDN6P56747 RNU6-675P-201ENST00000384236 104 ntBASIC-2.86□□□□□ -2.87
CLDN6P56747 RNU6-81P-201ENST00000365608 104 ntBASIC-2.87□□□□□ -2.87
CLDN6P56747 SNORD30.1-201ENST00000391309 70 ntBASIC-2.87□□□□□ -2.87
CLDN6P56747 RNY4P19-201ENST00000362530 96 ntBASIC-2.88□□□□□ -2.87
CLDN6P56747 AC110620.1-201ENST00000416042 228 ntBASIC-2.88□□□□□ -2.87
CLDN6P56747 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.88□□□□□ -2.87
CLDN6P56747 RNU6-153P-201ENST00000364422 104 ntBASIC-2.9□□□□□ -2.87
CLDN6P56747 AC103706.3-201ENST00000636297 85 ntBASIC-2.9□□□□□ -2.87
CLDN6P56747 RNU6-838P-201ENST00000363399 108 ntBASIC-2.91□□□□□ -2.88
CLDN6P56747 RNU6-787P-201ENST00000384032 107 ntBASIC-2.91□□□□□ -2.88
CLDN6P56747 SNORD111B-201ENST00000408587 80 ntBASIC-2.91□□□□□ -2.88
CLDN6P56747 MIR1245B-201ENST00000636115 69 ntBASIC-2.91□□□□□ -2.88
CLDN6P56747 MIR488-201ENST00000365739 83 ntBASIC-2.92□□□□□ -2.88
CLDN6P56747 RNU6-794P-201ENST00000517261 64 ntBASIC-2.93□□□□□ -2.88
CLDN6P56747 MIR5588-201ENST00000581890 63 ntBASIC-2.94□□□□□ -2.88
CLDN6P56747 U6.111-201ENST00000636093 83 ntBASIC-2.94□□□□□ -2.88
CLDN6P56747 AC114801.3-201ENST00000510231 177 ntBASIC-2.95□□□□□ -2.88
CLDN6P56747 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.96□□□□□ -2.88
CLDN6P56747 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.96□□□□□ -2.88
CLDN6P56747 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.98□□□□□ -2.89
CLDN6P56747 RNU6-844P-201ENST00000517175 102 ntBASIC-2.98□□□□□ -2.89
CLDN6P56747 RNU6-1168P-201ENST00000390831 104 ntBASIC-3□□□□□ -2.89
CLDN6P56747 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.02□□□□□ -2.89
CLDN6P56747 RNU7-171P-201ENST00000459581 62 ntBASIC-3.02□□□□□ -2.89
CLDN6P56747 RNU6-829P-201ENST00000363700 112 ntBASIC-3.03□□□□□ -2.89
CLDN6P56747 RNU6-892P-201ENST00000410335 99 ntBASIC-3.04□□□□□ -2.9
CLDN6P56747 IGLL4P-201ENST00000614590 133 ntBASIC-3.04□□□□□ -2.9
CLDN6P56747 U7.4-201ENST00000614961 63 ntBASIC-3.04□□□□□ -2.9
CLDN6P56747 RNU6-485P-201ENST00000363475 107 ntBASIC-3.05□□□□□ -2.9
CLDN6P56747 RNU6-22P-201ENST00000384355 107 ntBASIC-3.05□□□□□ -2.9
CLDN6P56747 MIR548F3-201ENST00000408509 87 ntBASIC-3.05□□□□□ -2.9
CLDN6P56747 MIR633-201ENST00000384821 98 ntBASIC-3.06□□□□□ -2.9
CLDN6P56747 RNU6-539P-201ENST00000516665 103 ntBASIC-3.06□□□□□ -2.9
CLDN6P56747 RNU6-894P-201ENST00000517094 105 ntBASIC-3.06□□□□□ -2.9
CLDN6P56747 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.07□□□□□ -2.9
CLDN6P56747 RNU6-753P-201ENST00000363926 107 ntBASIC-3.08□□□□□ -2.9
CLDN6P56747 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.08□□□□□ -2.9
CLDN6P56747 RNU6-640P-201ENST00000363693 105 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-32P-201ENST00000383948 107 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-13P-201ENST00000384248 107 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-12P-201ENST00000384604 107 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-41P-201ENST00000384741 107 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.09□□□□□ -2.9
CLDN6P56747 RNU6-930P-201ENST00000390938 100 ntBASIC-3.12□□□□□ -2.91
CLDN6P56747 RNU6-313P-201ENST00000516317 112 ntBASIC-3.12□□□□□ -2.91
CLDN6P56747 MIR4666B-201ENST00000578142 81 ntBASIC-3.12□□□□□ -2.91
CLDN6P56747 RNU6-49P-201ENST00000384256 107 ntBASIC-3.14□□□□□ -2.91
CLDN6P56747 MIR4679-1-201ENST00000637619 75 ntBASIC-3.14□□□□□ -2.91
CLDN6P56747 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.16□□□□□ -2.92
CLDN6P56747 RNU6-871P-201ENST00000516122 100 ntBASIC-3.17□□□□□ -2.92
CLDN6P56747 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.19□□□□□ -2.92
CLDN6P56747 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.2□□□□□ -2.92
CLDN6P56747 RNU6-471P-201ENST00000383944 106 ntBASIC-3.2□□□□□ -2.92
CLDN6P56747 RNU6-936P-201ENST00000384005 107 ntBASIC-3.24□□□□□ -2.93
CLDN6P56747 snosnR66.1-201ENST00000391095 99 ntBASIC-3.24□□□□□ -2.93
CLDN6P56747 RNU6-147P-201ENST00000383983 107 ntBASIC-3.25□□□□□ -2.93
CLDN6P56747 RNU6-242P-201ENST00000384359 107 ntBASIC-3.25□□□□□ -2.93
CLDN6P56747 AC079150.2-201ENST00000443733 78 ntBASIC-3.26□□□□□ -2.93
CLDN6P56747 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.28□□□□□ -2.93
CLDN6P56747 U6.103-201ENST00000637085 61 ntBASIC-3.28□□□□□ -2.93
CLDN6P56747 MIR548M-201ENST00000408260 86 ntBASIC-3.31□□□□□ -2.94
CLDN6P56747 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.32□□□□□ -2.94
CLDN6P56747 MIR3668-201ENST00000582138 75 ntBASIC-3.34□□□□□ -2.94
CLDN6P56747 RNU6-406P-201ENST00000516470 107 ntBASIC-3.35□□□□□ -2.95
CLDN6P56747 SNORA26.2-201ENST00000390922 122 ntBASIC-3.36□□□□□ -2.95
CLDN6P56747 RNU6-857P-201ENST00000515893 110 ntBASIC-3.37□□□□□ -2.95
CLDN6P56747 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.38□□□□□ -2.95
CLDN6P56747 MIR450A2-201ENST00000385022 100 ntBASIC-3.38□□□□□ -2.95
CLDN6P56747 MIR548T-201ENST00000408369 74 ntBASIC-3.38□□□□□ -2.95
CLDN6P56747 MIR1255A-201ENST00000408338 113 ntBASIC-3.4□□□□□ -2.95
CLDN6P56747 RNU6-919P-201ENST00000516731 104 ntBASIC-3.44□□□□□ -2.96
CLDN6P56747 MIR3910-1-201ENST00000580936 111 ntBASIC-3.44□□□□□ -2.96
CLDN6P56747 RNY4P30-201ENST00000410216 95 ntBASIC-3.45□□□□□ -2.96
CLDN6P56747 RNU6-215P-201ENST00000365169 102 ntBASIC-3.47□□□□□ -2.96
CLDN6P56747 RNU6-279P-201ENST00000391297 101 ntBASIC-3.47□□□□□ -2.96
CLDN6P56747 RNU6-573P-201ENST00000383938 106 ntBASIC-3.48□□□□□ -2.97
CLDN6P56747 RNU6-133P-201ENST00000383989 107 ntBASIC-3.48□□□□□ -2.97
CLDN6P56747 RNA5SP89-201ENST00000410300 108 ntBASIC-3.48□□□□□ -2.97
CLDN6P56747 SNORD20-201ENST00000384550 80 ntBASIC-3.49□□□□□ -2.97
CLDN6P56747 MIR3671-201ENST00000580455 88 ntBASIC-3.5□□□□□ -2.97
CLDN6P56747 RNU6-499P-201ENST00000365615 107 ntBASIC-3.51□□□□□ -2.97
CLDN6P56747 RNU6-820P-201ENST00000384273 107 ntBASIC-3.51□□□□□ -2.97
CLDN6P56747 RNA5SP225-201ENST00000410874 135 ntBASIC-3.51□□□□□ -2.97
CLDN6P56747 MT-TR-201ENST00000387439 65 ntBASIC-3.52□□□□□ -2.97
CLDN6P56747 MIR3202-2-201ENST00000635980 79 ntBASIC-3.55□□□□□ -2.98
CLDN6P56747 RNU6-724P-201ENST00000390958 105 ntBASIC-3.56□□□□□ -2.98
CLDN6P56747 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.6□□□□□ -2.99
CLDN6P56747 RNU6-44P-201ENST00000384045 107 ntBASIC-3.61□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms