Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 RNU6-242P-201ENST00000384359 107 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 MIR606-201ENST00000384851 96 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 RNU6-916P-201ENST00000516088 109 ntBASIC-5.23□□□□□ -3.25
CLIP1P30622 RNU6-986P-201ENST00000363133 102 ntBASIC-5.27□□□□□ -3.25
CLIP1P30622 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.27□□□□□ -3.25
CLIP1P30622 RNU6-49P-201ENST00000384256 107 ntBASIC-5.27□□□□□ -3.25
CLIP1P30622 RNU6-838P-201ENST00000363399 108 ntBASIC-5.28□□□□□ -3.25
CLIP1P30622 RNU6-787P-201ENST00000384032 107 ntBASIC-5.28□□□□□ -3.25
CLIP1P30622 MIR548S-201ENST00000581352 82 ntBASIC-5.29□□□□□ -3.26
CLIP1P30622 RNU6-388P-201ENST00000517012 105 ntBASIC-5.3□□□□□ -3.26
CLIP1P30622 RNU6-389P-201ENST00000517048 105 ntBASIC-5.3□□□□□ -3.26
CLIP1P30622 AC026407.1-201ENST00000518369 204 ntBASIC-5.3□□□□□ -3.26
CLIP1P30622 RNU6-32P-201ENST00000383948 107 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 RNU6-13P-201ENST00000384248 107 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 RNU6-12P-201ENST00000384604 107 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 RNU6-41P-201ENST00000384741 107 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 AC008267.6-201ENST00000441664 139 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 MIR4503-201ENST00000582187 83 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 MIR494-201ENST00000349529 81 ntBASIC-5.31□□□□□ -3.26
CLIP1P30622 RNU6-1212P-201ENST00000517023 104 ntBASIC-5.32□□□□□ -3.26
CLIP1P30622 RNU6-81P-201ENST00000365608 104 ntBASIC-5.33□□□□□ -3.26
CLIP1P30622 Y_RNA.464-201ENST00000384282 110 ntBASIC-5.34□□□□□ -3.26
CLIP1P30622 RNU6-738P-201ENST00000384531 106 ntBASIC-5.36□□□□□ -3.27
CLIP1P30622 AL365222.1-201ENST00000614661 98 ntBASIC-5.36□□□□□ -3.27
CLIP1P30622 SNORD113-1-201ENST00000365321 69 ntBASIC-5.4□□□□□ -3.27
CLIP1P30622 RNU6-620P-201ENST00000384017 96 ntBASIC-5.4□□□□□ -3.27
CLIP1P30622 MIR3908-201ENST00000579798 126 ntBASIC-5.43□□□□□ -3.28
CLIP1P30622 Y_RNA.61-201ENST00000362835 102 ntBASIC-5.46□□□□□ -3.28
CLIP1P30622 RNU6-829P-201ENST00000363700 112 ntBASIC-5.47□□□□□ -3.28
CLIP1P30622 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.47□□□□□ -3.28
CLIP1P30622 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.48□□□□□ -3.29
CLIP1P30622 RNU6-471P-201ENST00000383944 106 ntBASIC-5.48□□□□□ -3.29
CLIP1P30622 MIR450A2-201ENST00000385022 100 ntBASIC-5.48□□□□□ -3.29
CLIP1P30622 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.49□□□□□ -3.29
CLIP1P30622 RNU6-147P-201ENST00000383983 107 ntBASIC-5.49□□□□□ -3.29
CLIP1P30622 AC090425.1-201ENST00000610007 140 ntBASIC-5.49□□□□□ -3.29
CLIP1P30622 MIR633-201ENST00000384821 98 ntBASIC-5.54□□□□□ -3.3
CLIP1P30622 RNU6-294P-201ENST00000364999 102 ntBASIC-5.55□□□□□ -3.3
CLIP1P30622 RNU6-463P-201ENST00000384340 107 ntBASIC-5.56□□□□□ -3.3
CLIP1P30622 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.59□□□□□ -3.3
CLIP1P30622 RNU6-406P-201ENST00000516470 107 ntBASIC-5.6□□□□□ -3.31
CLIP1P30622 RNU6-753P-201ENST00000363926 107 ntBASIC-5.63□□□□□ -3.31
CLIP1P30622 RNY4P30-201ENST00000410216 95 ntBASIC-5.65□□□□□ -3.31
CLIP1P30622 RNU6-857P-201ENST00000515893 110 ntBASIC-5.67□□□□□ -3.32
CLIP1P30622 MIR3133-201ENST00000583157 78 ntBASIC-5.67□□□□□ -3.32
CLIP1P30622 RNU6-930P-201ENST00000390938 100 ntBASIC-5.68□□□□□ -3.32
CLIP1P30622 MIR548F3-201ENST00000408509 87 ntBASIC-5.68□□□□□ -3.32
CLIP1P30622 RNU6-327P-201ENST00000516270 127 ntBASIC-5.68□□□□□ -3.32
CLIP1P30622 RNU6-820P-201ENST00000384273 107 ntBASIC-5.69□□□□□ -3.32
CLIP1P30622 SNORD111B-201ENST00000408587 80 ntBASIC-5.7□□□□□ -3.32
CLIP1P30622 RNU6-22P-201ENST00000384355 107 ntBASIC-5.71□□□□□ -3.32
CLIP1P30622 MT-TG-201ENST00000387429 68 ntBASIC-5.71□□□□□ -3.32
CLIP1P30622 RNA5SP89-201ENST00000410300 108 ntBASIC-5.73□□□□□ -3.33
CLIP1P30622 Y_RNA.703-201ENST00000516846 111 ntBASIC-5.73□□□□□ -3.33
CLIP1P30622 SNORA26.2-201ENST00000390922 122 ntBASIC-5.74□□□□□ -3.33
CLIP1P30622 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.74□□□□□ -3.33
CLIP1P30622 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.76□□□□□ -3.33
CLIP1P30622 MIR3202-2-201ENST00000635980 79 ntBASIC-5.78□□□□□ -3.33
CLIP1P30622 RNU6-1091P-201ENST00000363945 107 ntBASIC-5.79□□□□□ -3.34
CLIP1P30622 RNU6-279P-201ENST00000391297 101 ntBASIC-5.8□□□□□ -3.34
CLIP1P30622 MIR1255A-201ENST00000408338 113 ntBASIC-5.8□□□□□ -3.34
CLIP1P30622 AC079150.2-201ENST00000443733 78 ntBASIC-5.82□□□□□ -3.34
CLIP1P30622 RNU6-313P-201ENST00000516317 112 ntBASIC-5.82□□□□□ -3.34
CLIP1P30622 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.83□□□□□ -3.34
CLIP1P30622 RNU6-1045P-201ENST00000516321 107 ntBASIC-5.83□□□□□ -3.34
CLIP1P30622 RNU6-153P-201ENST00000364422 104 ntBASIC-5.85□□□□□ -3.35
CLIP1P30622 RNU6-936P-201ENST00000384005 107 ntBASIC-5.86□□□□□ -3.35
CLIP1P30622 RNU6-1275P-201ENST00000391087 107 ntBASIC-5.87□□□□□ -3.35
CLIP1P30622 RNU6-485P-201ENST00000363475 107 ntBASIC-5.89□□□□□ -3.35
CLIP1P30622 RNU6-573P-201ENST00000383938 106 ntBASIC-5.98□□□□□ -3.37
CLIP1P30622 RNU6-919P-201ENST00000516731 104 ntBASIC-5.99□□□□□ -3.37
CLIP1P30622 MIR4662A-201ENST00000637499 67 ntBASIC-6.01□□□□□ -3.37
CLIP1P30622 RNU6-215P-201ENST00000365169 102 ntBASIC-6.03□□□□□ -3.37
CLIP1P30622 SNORD20-201ENST00000384550 80 ntBASIC-6.03□□□□□ -3.37
CLIP1P30622 RNA5SP225-201ENST00000410874 135 ntBASIC-6.05□□□□□ -3.38
CLIP1P30622 Y_RNA.694-201ENST00000516677 117 ntBASIC-6.06□□□□□ -3.38
CLIP1P30622 RNU6-894P-201ENST00000517094 105 ntBASIC-6.07□□□□□ -3.38
CLIP1P30622 DLEU2_4.2-201ENST00000616613 58 ntBASIC-6.09□□□□□ -3.38
CLIP1P30622 MIR5582-201ENST00000579697 68 ntBASIC-6.1□□□□□ -3.39
CLIP1P30622 U6.103-201ENST00000637085 61 ntBASIC-6.1□□□□□ -3.39
CLIP1P30622 RNU6-44P-201ENST00000384045 107 ntBASIC-6.11□□□□□ -3.39
CLIP1P30622 Y_RNA.369-201ENST00000365568 117 ntBASIC-6.12□□□□□ -3.39
CLIP1P30622 RNU6-499P-201ENST00000365615 107 ntBASIC-6.16□□□□□ -3.39
CLIP1P30622 SNORD78.1-201ENST00000390866 65 ntBASIC-6.19□□□□□ -3.4
CLIP1P30622 AC125388.1-201ENST00000459631 156 ntBASIC-6.23□□□□□ -3.41
CLIP1P30622 SNORD73B-201ENST00000364394 72 ntBASIC-6.25□□□□□ -3.41
CLIP1P30622 MIR3671-201ENST00000580455 88 ntBASIC-6.27□□□□□ -3.41
CLIP1P30622 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.28□□□□□ -3.41
CLIP1P30622 RNY4P29-201ENST00000410801 97 ntBASIC-6.3□□□□□ -3.42
CLIP1P30622 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-6.32□□□□□ -3.42
CLIP1P30622 RNU6-1011P-201ENST00000384668 107 ntBASIC-6.34□□□□□ -3.42
CLIP1P30622 RNU6-614P-201ENST00000384369 107 ntBASIC-6.37□□□□□ -3.43
CLIP1P30622 U6.59-201ENST00000615686 107 ntBASIC-6.37□□□□□ -3.43
CLIP1P30622 RNU6-892P-201ENST00000410335 99 ntBASIC-6.38□□□□□ -3.43
CLIP1P30622 RNY4P19-201ENST00000362530 96 ntBASIC-6.42□□□□□ -3.44
CLIP1P30622 RNU6-133P-201ENST00000383989 107 ntBASIC-6.42□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms