Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MTATP8P1-201ENST00000467115 207 ntBASIC-3.88□□□□□ -3.03
APOBP04114 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.88□□□□□ -3.03
APOBP04114 MIR450A1-201ENST00000362262 91 ntBASIC-3.88□□□□□ -3.03
APOBP04114 AC062037.2-201ENST00000610137 73 ntBASIC-3.89□□□□□ -3.03
APOBP04114 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.89□□□□□ -3.03
APOBP04114 RNU6-820P-201ENST00000384273 107 ntBASIC-3.91□□□□□ -3.04
APOBP04114 AC008267.6-201ENST00000441664 139 ntBASIC-3.91□□□□□ -3.04
APOBP04114 MIR1302-3-201ENST00000408128 138 ntBASIC-3.92□□□□□ -3.04
APOBP04114 SNORD116-14-201ENST00000383894 92 ntBASIC-3.92□□□□□ -3.04
APOBP04114 SNORD116-17-201ENST00000383929 92 ntBASIC-3.92□□□□□ -3.04
APOBP04114 SNORD116-15-201ENST00000384445 92 ntBASIC-3.92□□□□□ -3.04
APOBP04114 SNORD116-19-201ENST00000384729 92 ntBASIC-3.92□□□□□ -3.04
APOBP04114 MTND5P41-201ENST00000517498 206 ntBASIC-3.92□□□□□ -3.04
APOBP04114 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.92□□□□□ -3.04
APOBP04114 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.93□□□□□ -3.04
APOBP04114 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.93□□□□□ -3.04
APOBP04114 RNU7-200P-201ENST00000516105 62 ntBASIC-3.93□□□□□ -3.04
APOBP04114 AC079150.2-201ENST00000443733 78 ntBASIC-3.94□□□□□ -3.04
APOBP04114 SNORA26.2-201ENST00000390922 122 ntBASIC-3.95□□□□□ -3.04
APOBP04114 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.95□□□□□ -3.04
APOBP04114 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.96□□□□□ -3.04
APOBP04114 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.96□□□□□ -3.04
APOBP04114 RNU6-499P-201ENST00000365615 107 ntBASIC-3.97□□□□□ -3.04
APOBP04114 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.97□□□□□ -3.04
APOBP04114 RNU6-640P-201ENST00000363693 105 ntBASIC-3.97□□□□□ -3.05
APOBP04114 RNU6-875P-201ENST00000516488 106 ntBASIC-3.97□□□□□ -3.05
APOBP04114 RNY1P5-201ENST00000383890 115 ntBASIC-3.98□□□□□ -3.05
APOBP04114 RNU6-623P-201ENST00000363143 105 ntBASIC-3.98□□□□□ -3.05
APOBP04114 MIR488-201ENST00000365739 83 ntBASIC-3.98□□□□□ -3.05
APOBP04114 Y_RNA.216-201ENST00000364205 93 ntBASIC-3.99□□□□□ -3.05
APOBP04114 RNU6-724P-201ENST00000390958 105 ntBASIC-3.99□□□□□ -3.05
APOBP04114 MTCYBP9-201ENST00000431021 303 ntBASIC-4□□□□□ -3.05
APOBP04114 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.01□□□□□ -3.05
APOBP04114 RNU6-346P-201ENST00000516288 111 ntBASIC-4.02□□□□□ -3.05
APOBP04114 MIR548F4-201ENST00000408515 105 ntBASIC-4.03□□□□□ -3.05
APOBP04114 RNU6-49P-201ENST00000384256 107 ntBASIC-4.03□□□□□ -3.05
APOBP04114 MIR3671-201ENST00000580455 88 ntBASIC-4.04□□□□□ -3.06
APOBP04114 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.04□□□□□ -3.06
APOBP04114 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-4.05□□□□□ -3.06
APOBP04114 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.06□□□□□ -3.06
APOBP04114 MIR3202-2-201ENST00000635980 79 ntBASIC-4.07□□□□□ -3.06
APOBP04114 RNU6-147P-201ENST00000383983 107 ntBASIC-4.09□□□□□ -3.06
APOBP04114 RNU6-886P-201ENST00000384319 105 ntBASIC-4.12□□□□□ -3.07
APOBP04114 MIR633-201ENST00000384821 98 ntBASIC-4.12□□□□□ -3.07
APOBP04114 RNU6-1168P-201ENST00000390831 104 ntBASIC-4.12□□□□□ -3.07
APOBP04114 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.14□□□□□ -3.07
APOBP04114 MIR4662A-201ENST00000637499 67 ntBASIC-4.14□□□□□ -3.07
APOBP04114 AC008737.2-201ENST00000599446 118 ntBASIC-4.14□□□□□ -3.07
APOBP04114 MIR4795-201ENST00000584182 89 ntBASIC-4.16□□□□□ -3.08
APOBP04114 MIR4760-201ENST00000585040 80 ntBASIC-4.16□□□□□ -3.08
APOBP04114 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.16□□□□□ -3.08
APOBP04114 RNU6-22P-201ENST00000384355 107 ntBASIC-4.17□□□□□ -3.08
APOBP04114 MIR1255A-201ENST00000408338 113 ntBASIC-4.17□□□□□ -3.08
APOBP04114 MIR450A2-201ENST00000385022 100 ntBASIC-4.18□□□□□ -3.08
APOBP04114 RNU6-614P-201ENST00000384369 107 ntBASIC-4.19□□□□□ -3.08
APOBP04114 U6.59-201ENST00000615686 107 ntBASIC-4.19□□□□□ -3.08
APOBP04114 RNU6-279P-201ENST00000391297 101 ntBASIC-4.19□□□□□ -3.08
APOBP04114 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.19□□□□□ -3.08
APOBP04114 RNU6-313P-201ENST00000516317 112 ntBASIC-4.2□□□□□ -3.08
APOBP04114 MIR568-201ENST00000385036 95 ntBASIC-4.22□□□□□ -3.08
APOBP04114 RNU6-327P-201ENST00000516270 127 ntBASIC-4.22□□□□□ -3.08
APOBP04114 RNU6-857P-201ENST00000515893 110 ntBASIC-4.22□□□□□ -3.09
APOBP04114 RNU6-406P-201ENST00000516470 107 ntBASIC-4.22□□□□□ -3.09
APOBP04114 RNY4P30-201ENST00000410216 95 ntBASIC-4.23□□□□□ -3.09
APOBP04114 MT-TG-201ENST00000387429 68 ntBASIC-4.26□□□□□ -3.09
APOBP04114 AL365222.1-201ENST00000614661 98 ntBASIC-4.26□□□□□ -3.09
APOBP04114 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.29□□□□□ -3.1
APOBP04114 RNU6-388P-201ENST00000517012 105 ntBASIC-4.29□□□□□ -3.1
APOBP04114 RNU6-389P-201ENST00000517048 105 ntBASIC-4.29□□□□□ -3.1
APOBP04114 Y_RNA.81-201ENST00000362997 102 ntBASIC-4.29□□□□□ -3.1
APOBP04114 MIR606-201ENST00000384851 96 ntBASIC-4.29□□□□□ -3.1
APOBP04114 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-4.3□□□□□ -3.1
APOBP04114 RNU6-919P-201ENST00000516731 104 ntBASIC-4.31□□□□□ -3.1
APOBP04114 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.33□□□□□ -3.1
APOBP04114 RNU6-738P-201ENST00000384531 106 ntBASIC-4.33□□□□□ -3.1
APOBP04114 RNU6-1117P-201ENST00000384525 104 ntBASIC-4.34□□□□□ -3.1
APOBP04114 MTND3P3-201ENST00000505004 126 ntBASIC-4.34□□□□□ -3.1
APOBP04114 MTCYBP6-201ENST00000441810 138 ntBASIC-4.35□□□□□ -3.11
APOBP04114 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.36□□□□□ -3.11
APOBP04114 AC125388.1-201ENST00000459631 156 ntBASIC-4.36□□□□□ -3.11
APOBP04114 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.38□□□□□ -3.11
APOBP04114 Y_RNA.369-201ENST00000365568 117 ntBASIC-4.4□□□□□ -3.11
APOBP04114 MIR3908-201ENST00000579798 126 ntBASIC-4.4□□□□□ -3.11
APOBP04114 SNORD78.1-201ENST00000390866 65 ntBASIC-4.41□□□□□ -3.12
APOBP04114 RNA5SP89-201ENST00000410300 108 ntBASIC-4.45□□□□□ -3.12
APOBP04114 RNU6-573P-201ENST00000383938 106 ntBASIC-4.45□□□□□ -3.12
APOBP04114 MIR4503-201ENST00000582187 83 ntBASIC-4.48□□□□□ -3.13
APOBP04114 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.48□□□□□ -3.13
APOBP04114 RNU6-215P-201ENST00000365169 102 ntBASIC-4.49□□□□□ -3.13
APOBP04114 MIR548S-201ENST00000581352 82 ntBASIC-4.51□□□□□ -3.13
APOBP04114 MIR5582-201ENST00000579697 68 ntBASIC-4.51□□□□□ -3.13
APOBP04114 Y_RNA.61-201ENST00000362835 102 ntBASIC-4.53□□□□□ -3.13
APOBP04114 MTND4LP19-201ENST00000403051 166 ntBASIC-4.56□□□□□ -3.14
APOBP04114 SNORD20-201ENST00000384550 80 ntBASIC-4.57□□□□□ -3.14
APOBP04114 RNU6-44P-201ENST00000384045 107 ntBASIC-4.6□□□□□ -3.15
APOBP04114 MIR3133-201ENST00000583157 78 ntBASIC-4.62□□□□□ -3.15
APOBP04114 RNA5SP225-201ENST00000410874 135 ntBASIC-4.64□□□□□ -3.15
APOBP04114 Y_RNA.388-201ENST00000383919 113 ntBASIC-4.65□□□□□ -3.15
APOBP04114 RNY4P29-201ENST00000410801 97 ntBASIC-4.68□□□□□ -3.16
APOBP04114 AP000770.2-201ENST00000623694 100 ntBASIC-4.7□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms