Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.88□□□□□ -3.19
APOEP02649 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-4.92□□□□□ -3.2
APOEP02649 MIR450A2-201ENST00000385022 100 ntBASIC-4.93□□□□□ -3.2
APOEP02649 MIR548X-201ENST00000580069 75 ntBASIC-4.94□□□□□ -3.2
APOEP02649 U6.111-201ENST00000636093 83 ntBASIC-4.94□□□□□ -3.2
APOEP02649 MIR4317-201ENST00000637586 65 ntBASIC-4.95□□□□□ -3.2
APOEP02649 RNY4P30-201ENST00000410216 95 ntBASIC-4.96□□□□□ -3.2
APOEP02649 RNA5SP89-201ENST00000410300 108 ntBASIC-4.96□□□□□ -3.2
APOEP02649 RNU6-836P-201ENST00000362920 107 ntBASIC-4.97□□□□□ -3.21
APOEP02649 SNORD115.2-201ENST00000391126 59 ntBASIC-4.97□□□□□ -3.21
APOEP02649 RNU6-871P-201ENST00000516122 100 ntBASIC-4.98□□□□□ -3.21
APOEP02649 RNU6-539P-201ENST00000516665 103 ntBASIC-5.01□□□□□ -3.21
APOEP02649 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.01□□□□□ -3.21
APOEP02649 Y_RNA.335-201ENST00000365299 96 ntBASIC-5.02□□□□□ -3.21
APOEP02649 RNU6-788P-201ENST00000390967 104 ntBASIC-5.02□□□□□ -3.21
APOEP02649 MIR4679-1-201ENST00000637619 75 ntBASIC-5.04□□□□□ -3.22
APOEP02649 RNU6-919P-201ENST00000516731 104 ntBASIC-5.05□□□□□ -3.22
APOEP02649 RNU6-215P-201ENST00000365169 102 ntBASIC-5.06□□□□□ -3.22
APOEP02649 SNORD20-201ENST00000384550 80 ntBASIC-5.07□□□□□ -3.22
APOEP02649 AC110620.1-201ENST00000416042 228 ntBASIC-5.09□□□□□ -3.22
APOEP02649 RNU6-422P-201ENST00000384632 107 ntBASIC-5.1□□□□□ -3.23
APOEP02649 MIR4719-201ENST00000585233 84 ntBASIC-5.11□□□□□ -3.23
APOEP02649 RNU6-294P-201ENST00000364999 102 ntBASIC-5.12□□□□□ -3.23
APOEP02649 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.14□□□□□ -3.23
APOEP02649 MIR548M-201ENST00000408260 86 ntBASIC-5.14□□□□□ -3.23
APOEP02649 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.16□□□□□ -3.24
APOEP02649 RNU6-820P-201ENST00000384273 107 ntBASIC-5.16□□□□□ -3.24
APOEP02649 RNU6-44P-201ENST00000384045 107 ntBASIC-5.2□□□□□ -3.24
APOEP02649 RNU6-406P-201ENST00000516470 107 ntBASIC-5.2□□□□□ -3.24
APOEP02649 MIR3910-1-201ENST00000580936 111 ntBASIC-5.2□□□□□ -3.24
APOEP02649 MIR545-201ENST00000385085 106 ntBASIC-5.21□□□□□ -3.24
APOEP02649 MIR548H4-201ENST00000408689 111 ntBASIC-5.21□□□□□ -3.24
APOEP02649 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.25□□□□□ -3.25
APOEP02649 RNU6-776P-201ENST00000364403 104 ntBASIC-5.27□□□□□ -3.25
APOEP02649 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.27□□□□□ -3.25
APOEP02649 SNORD113-1-201ENST00000365321 69 ntBASIC-5.28□□□□□ -3.25
APOEP02649 RNU6-446P-201ENST00000362827 106 ntBASIC-5.29□□□□□ -3.26
APOEP02649 MIR548AL-201ENST00000578416 97 ntBASIC-5.29□□□□□ -3.26
APOEP02649 RNY4P13-201ENST00000384284 96 ntBASIC-5.31□□□□□ -3.26
APOEP02649 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.32□□□□□ -3.26
APOEP02649 RNU6-153P-201ENST00000364422 104 ntBASIC-5.32□□□□□ -3.26
APOEP02649 RNU6-857P-201ENST00000515893 110 ntBASIC-5.32□□□□□ -3.26
APOEP02649 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.32□□□□□ -3.26
APOEP02649 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.33□□□□□ -3.26
APOEP02649 MIR3202-2-201ENST00000635980 79 ntBASIC-5.33□□□□□ -3.26
APOEP02649 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.34□□□□□ -3.26
APOEP02649 RNU4-33P-201ENST00000364316 85 ntBASIC-5.37□□□□□ -3.27
APOEP02649 RNA5SP449-201ENST00000516871 130 ntBASIC-5.37□□□□□ -3.27
APOEP02649 AL606753.1-201ENST00000427435 87 ntBASIC-5.38□□□□□ -3.27
APOEP02649 AC114801.3-201ENST00000510231 177 ntBASIC-5.38□□□□□ -3.27
APOEP02649 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.39□□□□□ -3.27
APOEP02649 MIR3668-201ENST00000582138 75 ntBASIC-5.39□□□□□ -3.27
APOEP02649 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.41□□□□□ -3.28
APOEP02649 MIR1255A-201ENST00000408338 113 ntBASIC-5.42□□□□□ -3.28
APOEP02649 MIR5582-201ENST00000579697 68 ntBASIC-5.42□□□□□ -3.28
APOEP02649 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.43□□□□□ -3.28
APOEP02649 RNU4-85P-201ENST00000364675 123 ntBASIC-5.43□□□□□ -3.28
APOEP02649 MT-TR-201ENST00000387439 65 ntBASIC-5.43□□□□□ -3.28
APOEP02649 RNU6-279P-201ENST00000391297 101 ntBASIC-5.43□□□□□ -3.28
APOEP02649 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.44□□□□□ -3.28
APOEP02649 Y_RNA.369-201ENST00000365568 117 ntBASIC-5.45□□□□□ -3.28
APOEP02649 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.45□□□□□ -3.28
APOEP02649 SNORD113-4-201ENST00000364802 75 ntBASIC-5.46□□□□□ -3.28
APOEP02649 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.46□□□□□ -3.28
APOEP02649 RNU6-471P-201ENST00000383944 106 ntBASIC-5.48□□□□□ -3.29
APOEP02649 snosnR66.1-201ENST00000391095 99 ntBASIC-5.51□□□□□ -3.29
APOEP02649 RNU6-808P-201ENST00000391233 108 ntBASIC-5.52□□□□□ -3.29
APOEP02649 RNU6-573P-201ENST00000383938 106 ntBASIC-5.53□□□□□ -3.29
APOEP02649 MIR3671-201ENST00000580455 88 ntBASIC-5.63□□□□□ -3.31
APOEP02649 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.64□□□□□ -3.31
APOEP02649 RNU6-829P-201ENST00000363700 112 ntBASIC-5.67□□□□□ -3.32
APOEP02649 MIR363-201ENST00000384840 75 ntBASIC-5.68□□□□□ -3.32
APOEP02649 SNORD73B-201ENST00000364394 72 ntBASIC-5.69□□□□□ -3.32
APOEP02649 RNA5SP225-201ENST00000410874 135 ntBASIC-5.69□□□□□ -3.32
APOEP02649 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.7□□□□□ -3.32
APOEP02649 MIR633-201ENST00000384821 98 ntBASIC-5.7□□□□□ -3.32
APOEP02649 SNORA26.2-201ENST00000390922 122 ntBASIC-5.71□□□□□ -3.32
APOEP02649 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.72□□□□□ -3.33
APOEP02649 RNU6-838P-201ENST00000363399 108 ntBASIC-5.74□□□□□ -3.33
APOEP02649 MIR4662A-201ENST00000637499 67 ntBASIC-5.74□□□□□ -3.33
APOEP02649 RNY4P29-201ENST00000410801 97 ntBASIC-5.76□□□□□ -3.33
APOEP02649 SNORD78.1-201ENST00000390866 65 ntBASIC-5.77□□□□□ -3.33
APOEP02649 Y_RNA.388-201ENST00000383919 113 ntBASIC-5.78□□□□□ -3.33
APOEP02649 RNU6-59P-201ENST00000384787 107 ntBASIC-5.81□□□□□ -3.34
APOEP02649 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.85□□□□□ -3.35
APOEP02649 RNU6-986P-201ENST00000363133 102 ntBASIC-5.88□□□□□ -3.35
APOEP02649 RNU6-916P-201ENST00000516088 109 ntBASIC-5.93□□□□□ -3.36
APOEP02649 RNU6-627P-201ENST00000364032 102 ntBASIC-5.94□□□□□ -3.36
APOEP02649 AC079150.2-201ENST00000443733 78 ntBASIC-6□□□□□ -3.37
APOEP02649 RNA5SP170-201ENST00000517150 101 ntBASIC-6□□□□□ -3.37
APOEP02649 RNU6-753P-201ENST00000363926 107 ntBASIC-6.05□□□□□ -3.38
APOEP02649 RNU6-1298P-201ENST00000362456 101 ntBASIC-6.08□□□□□ -3.38
APOEP02649 AL603908.1-201ENST00000406098 201 ntBASIC-6.12□□□□□ -3.39
APOEP02649 Y_RNA.15-201ENST00000362420 102 ntBASIC-6.17□□□□□ -3.4
APOEP02649 RNU6-620P-201ENST00000384017 96 ntBASIC-6.17□□□□□ -3.4
APOEP02649 RNU6-930P-201ENST00000390938 100 ntBASIC-6.17□□□□□ -3.4
APOEP02649 RNU6-936P-201ENST00000384005 107 ntBASIC-6.21□□□□□ -3.4
APOEP02649 MIR548F3-201ENST00000408509 87 ntBASIC-6.21□□□□□ -3.4
APOEP02649 AC125388.1-201ENST00000459631 156 ntBASIC-6.23□□□□□ -3.41
APOEP02649 Y_RNA.685-201ENST00000516532 108 ntBASIC-6.3□□□□□ -3.42
Retrieved 100 of 98,524 protein–RNA pairs in 245.7 ms