Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR5588-201ENST00000581890 63 ntBASIC-3.12□□□□□ -2.91
ABCA1O95477 MIR4679-1-201ENST00000637619 75 ntBASIC-3.12□□□□□ -2.91
ABCA1O95477 RNU6-485P-201ENST00000363475 107 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 RNU6-886P-201ENST00000384319 105 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 MIR4712-201ENST00000583750 82 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 RNY4P19-201ENST00000362530 96 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 AC114801.3-201ENST00000510231 177 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.13□□□□□ -2.91
ABCA1O95477 MIR450A1-201ENST00000362262 91 ntBASIC-3.14□□□□□ -2.91
ABCA1O95477 SNORD30.1-201ENST00000391309 70 ntBASIC-3.16□□□□□ -2.91
ABCA1O95477 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.17□□□□□ -2.92
ABCA1O95477 AC008267.6-201ENST00000441664 139 ntBASIC-3.18□□□□□ -2.92
ABCA1O95477 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.18□□□□□ -2.92
ABCA1O95477 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.18□□□□□ -2.92
ABCA1O95477 RNU6-539P-201ENST00000516665 103 ntBASIC-3.18□□□□□ -2.92
ABCA1O95477 MIR4666B-201ENST00000578142 81 ntBASIC-3.18□□□□□ -2.92
ABCA1O95477 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.19□□□□□ -2.92
ABCA1O95477 RNY1P5-201ENST00000383890 115 ntBASIC-3.2□□□□□ -2.92
ABCA1O95477 RNU6-892P-201ENST00000410335 99 ntBASIC-3.2□□□□□ -2.92
ABCA1O95477 RNU6-894P-201ENST00000517094 105 ntBASIC-3.21□□□□□ -2.92
ABCA1O95477 MIR1245B-201ENST00000636115 69 ntBASIC-3.21□□□□□ -2.92
ABCA1O95477 U6.111-201ENST00000636093 83 ntBASIC-3.21□□□□□ -2.92
ABCA1O95477 RNU6-829P-201ENST00000363700 112 ntBASIC-3.22□□□□□ -2.92
ABCA1O95477 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.22□□□□□ -2.92
ABCA1O95477 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.22□□□□□ -2.93
ABCA1O95477 RNU6-81P-201ENST00000365608 104 ntBASIC-3.23□□□□□ -2.93
ABCA1O95477 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.23□□□□□ -2.93
ABCA1O95477 SNORD111B-201ENST00000408587 80 ntBASIC-3.24□□□□□ -2.93
ABCA1O95477 MIR4503-201ENST00000582187 83 ntBASIC-3.24□□□□□ -2.93
ABCA1O95477 RNU6-346P-201ENST00000516288 111 ntBASIC-3.25□□□□□ -2.93
ABCA1O95477 U7.4-201ENST00000614961 63 ntBASIC-3.25□□□□□ -2.93
ABCA1O95477 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.26□□□□□ -2.93
ABCA1O95477 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.27□□□□□ -2.93
ABCA1O95477 IGLL4P-201ENST00000614590 133 ntBASIC-3.3□□□□□ -2.94
ABCA1O95477 RNU6-930P-201ENST00000390938 100 ntBASIC-3.31□□□□□ -2.94
ABCA1O95477 RNU6-871P-201ENST00000516122 100 ntBASIC-3.31□□□□□ -2.94
ABCA1O95477 RNU6-753P-201ENST00000363926 107 ntBASIC-3.31□□□□□ -2.94
ABCA1O95477 RNU6-463P-201ENST00000384340 107 ntBASIC-3.32□□□□□ -2.94
ABCA1O95477 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.32□□□□□ -2.94
ABCA1O95477 RNU6-471P-201ENST00000383944 106 ntBASIC-3.33□□□□□ -2.94
ABCA1O95477 MIR488-201ENST00000365739 83 ntBASIC-3.33□□□□□ -2.94
ABCA1O95477 RNU6-640P-201ENST00000363693 105 ntBASIC-3.34□□□□□ -2.94
ABCA1O95477 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.39□□□□□ -2.95
ABCA1O95477 MIR548F3-201ENST00000408509 87 ntBASIC-3.39□□□□□ -2.95
ABCA1O95477 MIR633-201ENST00000384821 98 ntBASIC-3.41□□□□□ -2.96
ABCA1O95477 SNORA26.2-201ENST00000390922 122 ntBASIC-3.45□□□□□ -2.96
ABCA1O95477 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.45□□□□□ -2.96
ABCA1O95477 RNY4P30-201ENST00000410216 95 ntBASIC-3.45□□□□□ -2.96
ABCA1O95477 U6.103-201ENST00000637085 61 ntBASIC-3.45□□□□□ -2.96
ABCA1O95477 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.46□□□□□ -2.96
ABCA1O95477 RNU6-936P-201ENST00000384005 107 ntBASIC-3.46□□□□□ -2.96
ABCA1O95477 RNU6-49P-201ENST00000384256 107 ntBASIC-3.46□□□□□ -2.96
ABCA1O95477 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.47□□□□□ -2.96
ABCA1O95477 AL365222.1-201ENST00000614661 98 ntBASIC-3.47□□□□□ -2.97
ABCA1O95477 RNU6-22P-201ENST00000384355 107 ntBASIC-3.48□□□□□ -2.97
ABCA1O95477 RNU6-32P-201ENST00000383948 107 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 RNU6-13P-201ENST00000384248 107 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 RNU6-12P-201ENST00000384604 107 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 RNU6-41P-201ENST00000384741 107 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 MIR1255A-201ENST00000408338 113 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.5□□□□□ -2.97
ABCA1O95477 RNU6-242P-201ENST00000384359 107 ntBASIC-3.51□□□□□ -2.97
ABCA1O95477 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.51□□□□□ -2.97
ABCA1O95477 RNU6-147P-201ENST00000383983 107 ntBASIC-3.52□□□□□ -2.97
ABCA1O95477 MIR450A2-201ENST00000385022 100 ntBASIC-3.55□□□□□ -2.98
ABCA1O95477 RNU6-133P-201ENST00000383989 107 ntBASIC-3.55□□□□□ -2.98
ABCA1O95477 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.56□□□□□ -2.98
ABCA1O95477 RNU6-279P-201ENST00000391297 101 ntBASIC-3.59□□□□□ -2.98
ABCA1O95477 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.59□□□□□ -2.98
ABCA1O95477 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.6□□□□□ -2.99
ABCA1O95477 RNU6-820P-201ENST00000384273 107 ntBASIC-3.6□□□□□ -2.99
ABCA1O95477 AC079150.2-201ENST00000443733 78 ntBASIC-3.6□□□□□ -2.99
ABCA1O95477 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.64□□□□□ -2.99
ABCA1O95477 RNU6-499P-201ENST00000365615 107 ntBASIC-3.64□□□□□ -2.99
ABCA1O95477 RNU6-857P-201ENST00000515893 110 ntBASIC-3.65□□□□□ -2.99
ABCA1O95477 MIR3671-201ENST00000580455 88 ntBASIC-3.66□□□□□ -3
ABCA1O95477 MIR3202-2-201ENST00000635980 79 ntBASIC-3.67□□□□□ -3
ABCA1O95477 RNU6-1011P-201ENST00000384668 107 ntBASIC-3.68□□□□□ -3
ABCA1O95477 RNA5SP89-201ENST00000410300 108 ntBASIC-3.68□□□□□ -3
ABCA1O95477 RNU6-614P-201ENST00000384369 107 ntBASIC-3.69□□□□□ -3
ABCA1O95477 U6.59-201ENST00000615686 107 ntBASIC-3.69□□□□□ -3
ABCA1O95477 MIR548T-201ENST00000408369 74 ntBASIC-3.69□□□□□ -3
ABCA1O95477 RNU6-919P-201ENST00000516731 104 ntBASIC-3.69□□□□□ -3
ABCA1O95477 RNU6-406P-201ENST00000516470 107 ntBASIC-3.7□□□□□ -3
ABCA1O95477 MIR3133-201ENST00000583157 78 ntBASIC-3.71□□□□□ -3
ABCA1O95477 RNA5SP225-201ENST00000410874 135 ntBASIC-3.75□□□□□ -3.01
ABCA1O95477 RNU6-794P-201ENST00000517261 64 ntBASIC-3.77□□□□□ -3.01
ABCA1O95477 AP001094.1-201ENST00000579805 193 ntBASIC-3.78□□□□□ -3.02
ABCA1O95477 AC125388.1-201ENST00000459631 156 ntBASIC-3.79□□□□□ -3.02
ABCA1O95477 MIR4662A-201ENST00000637499 67 ntBASIC-3.79□□□□□ -3.02
ABCA1O95477 SNORD20-201ENST00000384550 80 ntBASIC-3.82□□□□□ -3.02
ABCA1O95477 RNU6-724P-201ENST00000390958 105 ntBASIC-3.83□□□□□ -3.02
ABCA1O95477 RNU6-573P-201ENST00000383938 106 ntBASIC-3.83□□□□□ -3.02
ABCA1O95477 SNORD78.1-201ENST00000390866 65 ntBASIC-3.84□□□□□ -3.02
ABCA1O95477 MIR548M-201ENST00000408260 86 ntBASIC-3.84□□□□□ -3.02
ABCA1O95477 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.87□□□□□ -3.03
ABCA1O95477 RNU6-313P-201ENST00000516317 112 ntBASIC-3.88□□□□□ -3.03
ABCA1O95477 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.92□□□□□ -3.04
ABCA1O95477 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.93□□□□□ -3.04
ABCA1O95477 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.93□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms