Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNA5SP225-201ENST00000410874 135 ntBASIC-2.61□□□□□ -2.83
SIX3O95343 RNU6-176P-201ENST00000517196 105 ntBASIC-2.62□□□□□ -2.83
SIX3O95343 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.63□□□□□ -2.83
SIX3O95343 RNU6-279P-201ENST00000391297 101 ntBASIC-2.64□□□□□ -2.83
SIX3O95343 RNU6-419P-201ENST00000517030 63 ntBASIC-2.64□□□□□ -2.83
SIX3O95343 RNU6-742P-201ENST00000365289 107 ntBASIC-2.65□□□□□ -2.83
SIX3O95343 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.65□□□□□ -2.83
SIX3O95343 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.67□□□□□ -2.84
SIX3O95343 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.68□□□□□ -2.84
SIX3O95343 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.68□□□□□ -2.84
SIX3O95343 SNORD78.1-201ENST00000390866 65 ntBASIC-2.68□□□□□ -2.84
SIX3O95343 MIR1254-1-201ENST00000408257 97 ntBASIC-2.69□□□□□ -2.84
SIX3O95343 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.69□□□□□ -2.84
SIX3O95343 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.7□□□□□ -2.84
SIX3O95343 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.7□□□□□ -2.84
SIX3O95343 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.72□□□□□ -2.84
SIX3O95343 AC110620.1-201ENST00000416042 228 ntBASIC-2.72□□□□□ -2.84
SIX3O95343 MIR4662A-201ENST00000637499 67 ntBASIC-2.72□□□□□ -2.84
SIX3O95343 RNU6-776P-201ENST00000364403 104 ntBASIC-2.74□□□□□ -2.85
SIX3O95343 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.74□□□□□ -2.85
SIX3O95343 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.75□□□□□ -2.85
SIX3O95343 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.75□□□□□ -2.85
SIX3O95343 AL731768.1-201ENST00000603124 139 ntBASIC-2.77□□□□□ -2.85
SIX3O95343 MIR548X-201ENST00000580069 75 ntBASIC-2.79□□□□□ -2.86
SIX3O95343 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.79□□□□□ -2.86
SIX3O95343 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.81□□□□□ -2.86
SIX3O95343 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.82□□□□□ -2.86
SIX3O95343 RNY4P25-201ENST00000459254 96 ntBASIC-2.83□□□□□ -2.86
SIX3O95343 RNU6-822P-201ENST00000362707 106 ntBASIC-2.85□□□□□ -2.87
SIX3O95343 RNY4P13-201ENST00000384284 96 ntBASIC-2.85□□□□□ -2.87
SIX3O95343 RNU6-345P-201ENST00000517001 107 ntBASIC-2.85□□□□□ -2.87
SIX3O95343 MIR4317-201ENST00000637586 65 ntBASIC-2.86□□□□□ -2.87
SIX3O95343 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.88□□□□□ -2.87
SIX3O95343 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.89□□□□□ -2.87
SIX3O95343 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.89□□□□□ -2.87
SIX3O95343 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.89□□□□□ -2.87
SIX3O95343 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.89□□□□□ -2.87
SIX3O95343 RNU6-471P-201ENST00000383944 106 ntBASIC-2.89□□□□□ -2.87
SIX3O95343 RNU6-446P-201ENST00000362827 106 ntBASIC-2.91□□□□□ -2.88
SIX3O95343 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.92□□□□□ -2.88
SIX3O95343 SNORD115.2-201ENST00000391126 59 ntBASIC-2.92□□□□□ -2.88
SIX3O95343 AC114801.3-201ENST00000510231 177 ntBASIC-2.92□□□□□ -2.88
SIX3O95343 MIR1302-4-201ENST00000408701 150 ntBASIC-2.96□□□□□ -2.88
SIX3O95343 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.96□□□□□ -2.88
SIX3O95343 SNORD114-13-201ENST00000364377 74 ntBASIC-2.97□□□□□ -2.88
SIX3O95343 AC139453.2-201ENST00000487255 133 ntBASIC-2.97□□□□□ -2.88
SIX3O95343 AL359920.1-201ENST00000618332 176 ntBASIC-2.97□□□□□ -2.88
SIX3O95343 MIR633-201ENST00000384821 98 ntBASIC-2.99□□□□□ -2.89
SIX3O95343 RNU4-33P-201ENST00000364316 85 ntBASIC-3.01□□□□□ -2.89
SIX3O95343 SNORD113-4-201ENST00000364802 75 ntBASIC-3.01□□□□□ -2.89
SIX3O95343 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.01□□□□□ -2.89
SIX3O95343 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.03□□□□□ -2.89
SIX3O95343 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.05□□□□□ -2.9
SIX3O95343 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.05□□□□□ -2.9
SIX3O95343 RNU6-737P-201ENST00000365370 107 ntBASIC-3.06□□□□□ -2.9
SIX3O95343 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.07□□□□□ -2.9
SIX3O95343 RNU6-829P-201ENST00000363700 112 ntBASIC-3.09□□□□□ -2.9
SIX3O95343 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.09□□□□□ -2.9
SIX3O95343 MIR548AL-201ENST00000578416 97 ntBASIC-3.1□□□□□ -2.91
SIX3O95343 RNU6-854P-201ENST00000364036 107 ntBASIC-3.11□□□□□ -2.91
SIX3O95343 MIR656-201ENST00000385224 78 ntBASIC-3.14□□□□□ -2.91
SIX3O95343 AC125388.1-201ENST00000459631 156 ntBASIC-3.14□□□□□ -2.91
SIX3O95343 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.15□□□□□ -2.91
SIX3O95343 RNA5SP224-201ENST00000365069 126 ntBASIC-3.15□□□□□ -2.91
SIX3O95343 RNU6-665P-201ENST00000384639 107 ntBASIC-3.15□□□□□ -2.91
SIX3O95343 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.17□□□□□ -2.92
SIX3O95343 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.17□□□□□ -2.92
SIX3O95343 RNU6-836P-201ENST00000362920 107 ntBASIC-3.18□□□□□ -2.92
SIX3O95343 SNORD115-45-201ENST00000391078 81 ntBASIC-3.18□□□□□ -2.92
SIX3O95343 SNORD45C-201ENST00000383893 79 ntBASIC-3.19□□□□□ -2.92
SIX3O95343 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.2□□□□□ -2.92
SIX3O95343 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.2□□□□□ -2.92
SIX3O95343 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.21□□□□□ -2.92
SIX3O95343 MIR548H4-201ENST00000408689 111 ntBASIC-3.21□□□□□ -2.92
SIX3O95343 MIR124-1-201ENST00000385275 85 ntBASIC-3.23□□□□□ -2.93
SIX3O95343 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.25□□□□□ -2.93
SIX3O95343 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.26□□□□□ -2.93
SIX3O95343 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.27□□□□□ -2.93
SIX3O95343 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.28□□□□□ -2.93
SIX3O95343 MIR548AH-201ENST00000637109 76 ntBASIC-3.29□□□□□ -2.94
SIX3O95343 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.3□□□□□ -2.94
SIX3O95343 AC079150.2-201ENST00000443733 78 ntBASIC-3.3□□□□□ -2.94
SIX3O95343 RNU6-808P-201ENST00000391233 108 ntBASIC-3.33□□□□□ -2.94
SIX3O95343 RNU6-838P-201ENST00000363399 108 ntBASIC-3.34□□□□□ -2.94
SIX3O95343 RNU6-788P-201ENST00000390967 104 ntBASIC-3.35□□□□□ -2.95
SIX3O95343 RNU6-753P-201ENST00000363926 107 ntBASIC-3.36□□□□□ -2.95
SIX3O95343 RNU6-936P-201ENST00000384005 107 ntBASIC-3.37□□□□□ -2.95
SIX3O95343 RNU6-499P-201ENST00000365615 107 ntBASIC-3.38□□□□□ -2.95
SIX3O95343 RNU6-986P-201ENST00000363133 102 ntBASIC-3.43□□□□□ -2.96
SIX3O95343 MIR545-201ENST00000385085 106 ntBASIC-3.45□□□□□ -2.96
SIX3O95343 RNU6-638P-201ENST00000516582 104 ntBASIC-3.46□□□□□ -2.96
SIX3O95343 RNU6-422P-201ENST00000384632 107 ntBASIC-3.49□□□□□ -2.97
SIX3O95343 SNORA72.7-201ENST00000516349 94 ntBASIC-3.5□□□□□ -2.97
SIX3O95343 RNU6-930P-201ENST00000390938 100 ntBASIC-3.51□□□□□ -2.97
SIX3O95343 RNU6-614P-201ENST00000384369 107 ntBASIC-3.54□□□□□ -2.98
SIX3O95343 U6.59-201ENST00000615686 107 ntBASIC-3.54□□□□□ -2.98
SIX3O95343 RNU6-59P-201ENST00000384787 107 ntBASIC-3.55□□□□□ -2.98
SIX3O95343 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.61□□□□□ -2.99
SIX3O95343 MIR363-201ENST00000384840 75 ntBASIC-3.63□□□□□ -2.99
SIX3O95343 MIR548F3-201ENST00000408509 87 ntBASIC-3.67□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms