Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNY4P29-201ENST00000410801 97 ntBASIC-3.2□□□□□ -2.92
CLDN3O15551 AC110620.1-201ENST00000416042 228 ntBASIC-3.2□□□□□ -2.92
CLDN3O15551 RNA5SP170-201ENST00000517150 101 ntBASIC-3.2□□□□□ -2.92
CLDN3O15551 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.24□□□□□ -2.93
CLDN3O15551 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.24□□□□□ -2.93
CLDN3O15551 RNA5SP106-201ENST00000517274 100 ntBASIC-3.24□□□□□ -2.93
CLDN3O15551 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.26□□□□□ -2.93
CLDN3O15551 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.27□□□□□ -2.93
CLDN3O15551 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.27□□□□□ -2.93
CLDN3O15551 SNORD78.1-201ENST00000390866 65 ntBASIC-3.28□□□□□ -2.93
CLDN3O15551 RNY4P10-201ENST00000365571 96 ntBASIC-3.29□□□□□ -2.94
CLDN3O15551 MIR548X-201ENST00000580069 75 ntBASIC-3.29□□□□□ -2.94
CLDN3O15551 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.32□□□□□ -2.94
CLDN3O15551 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.32□□□□□ -2.94
CLDN3O15551 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.33□□□□□ -2.94
CLDN3O15551 RNA5SP225-201ENST00000410874 135 ntBASIC-3.33□□□□□ -2.94
CLDN3O15551 MIR4662A-201ENST00000637499 67 ntBASIC-3.33□□□□□ -2.94
CLDN3O15551 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.34□□□□□ -2.94
CLDN3O15551 MIR1254-1-201ENST00000408257 97 ntBASIC-3.34□□□□□ -2.94
CLDN3O15551 AL731768.1-201ENST00000603124 139 ntBASIC-3.34□□□□□ -2.94
CLDN3O15551 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.35□□□□□ -2.95
CLDN3O15551 RNU6-776P-201ENST00000364403 104 ntBASIC-3.36□□□□□ -2.95
CLDN3O15551 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.36□□□□□ -2.95
CLDN3O15551 RNU6-345P-201ENST00000517001 107 ntBASIC-3.36□□□□□ -2.95
CLDN3O15551 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.36□□□□□ -2.95
CLDN3O15551 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.37□□□□□ -2.95
CLDN3O15551 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.38□□□□□ -2.95
CLDN3O15551 RNU6-471P-201ENST00000383944 106 ntBASIC-3.38□□□□□ -2.95
CLDN3O15551 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.4□□□□□ -2.95
CLDN3O15551 SNORD114-13-201ENST00000364377 74 ntBASIC-3.4□□□□□ -2.95
CLDN3O15551 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.41□□□□□ -2.96
CLDN3O15551 RNU6-822P-201ENST00000362707 106 ntBASIC-3.42□□□□□ -2.96
CLDN3O15551 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.44□□□□□ -2.96
CLDN3O15551 RNU6-446P-201ENST00000362827 106 ntBASIC-3.46□□□□□ -2.96
CLDN3O15551 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.46□□□□□ -2.96
CLDN3O15551 MIR4317-201ENST00000637586 65 ntBASIC-3.48□□□□□ -2.97
CLDN3O15551 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.49□□□□□ -2.97
CLDN3O15551 MIR1302-4-201ENST00000408701 150 ntBASIC-3.49□□□□□ -2.97
CLDN3O15551 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.5□□□□□ -2.97
CLDN3O15551 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.51□□□□□ -2.97
CLDN3O15551 AC114801.3-201ENST00000510231 177 ntBASIC-3.52□□□□□ -2.97
CLDN3O15551 AL359920.1-201ENST00000618332 176 ntBASIC-3.54□□□□□ -2.98
CLDN3O15551 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.55□□□□□ -2.98
CLDN3O15551 AC139453.2-201ENST00000487255 133 ntBASIC-3.57□□□□□ -2.98
CLDN3O15551 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.59□□□□□ -2.98
CLDN3O15551 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.6□□□□□ -2.99
CLDN3O15551 RNU4-33P-201ENST00000364316 85 ntBASIC-3.6□□□□□ -2.99
CLDN3O15551 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.6□□□□□ -2.99
CLDN3O15551 SNORD113-4-201ENST00000364802 75 ntBASIC-3.63□□□□□ -2.99
CLDN3O15551 MIR548AL-201ENST00000578416 97 ntBASIC-3.64□□□□□ -2.99
CLDN3O15551 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.68□□□□□ -3
CLDN3O15551 MIR548H4-201ENST00000408689 111 ntBASIC-3.68□□□□□ -3
CLDN3O15551 RNU6-829P-201ENST00000363700 112 ntBASIC-3.7□□□□□ -3
CLDN3O15551 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.7□□□□□ -3
CLDN3O15551 MIR633-201ENST00000384821 98 ntBASIC-3.72□□□□□ -3
CLDN3O15551 SNORD115.2-201ENST00000391126 59 ntBASIC-3.72□□□□□ -3
CLDN3O15551 RNA5SP224-201ENST00000365069 126 ntBASIC-3.73□□□□□ -3.01
CLDN3O15551 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.74□□□□□ -3.01
CLDN3O15551 MIR656-201ENST00000385224 78 ntBASIC-3.75□□□□□ -3.01
CLDN3O15551 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.76□□□□□ -3.01
CLDN3O15551 RNU6-836P-201ENST00000362920 107 ntBASIC-3.78□□□□□ -3.01
CLDN3O15551 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.79□□□□□ -3.02
CLDN3O15551 SNORD45C-201ENST00000383893 79 ntBASIC-3.8□□□□□ -3.02
CLDN3O15551 RNU6-665P-201ENST00000384639 107 ntBASIC-3.81□□□□□ -3.02
CLDN3O15551 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.82□□□□□ -3.02
CLDN3O15551 RNU6-737P-201ENST00000365370 107 ntBASIC-3.84□□□□□ -3.02
CLDN3O15551 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.84□□□□□ -3.02
CLDN3O15551 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.87□□□□□ -3.03
CLDN3O15551 RNU6-808P-201ENST00000391233 108 ntBASIC-3.87□□□□□ -3.03
CLDN3O15551 AC125388.1-201ENST00000459631 156 ntBASIC-3.87□□□□□ -3.03
CLDN3O15551 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.88□□□□□ -3.03
CLDN3O15551 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.88□□□□□ -3.03
CLDN3O15551 SNORD115-45-201ENST00000391078 81 ntBASIC-3.88□□□□□ -3.03
CLDN3O15551 RNU6-838P-201ENST00000363399 108 ntBASIC-3.9□□□□□ -3.03
CLDN3O15551 AC079150.2-201ENST00000443733 78 ntBASIC-3.9□□□□□ -3.03
CLDN3O15551 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.94□□□□□ -3.04
CLDN3O15551 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.96□□□□□ -3.04
CLDN3O15551 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.97□□□□□ -3.04
CLDN3O15551 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.97□□□□□ -3.04
CLDN3O15551 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.98□□□□□ -3.05
CLDN3O15551 RNU6-854P-201ENST00000364036 107 ntBASIC-3.99□□□□□ -3.05
CLDN3O15551 MIR124-1-201ENST00000385275 85 ntBASIC-4.05□□□□□ -3.06
CLDN3O15551 RNU6-499P-201ENST00000365615 107 ntBASIC-4.06□□□□□ -3.06
CLDN3O15551 RNU6-753P-201ENST00000363926 107 ntBASIC-4.09□□□□□ -3.06
CLDN3O15551 RNY4P13-201ENST00000384284 96 ntBASIC-4.11□□□□□ -3.07
CLDN3O15551 RNU6-59P-201ENST00000384787 107 ntBASIC-4.11□□□□□ -3.07
CLDN3O15551 MIR548AH-201ENST00000637109 76 ntBASIC-4.11□□□□□ -3.07
CLDN3O15551 RNU6-986P-201ENST00000363133 102 ntBASIC-4.16□□□□□ -3.08
CLDN3O15551 RNU6-936P-201ENST00000384005 107 ntBASIC-4.16□□□□□ -3.08
CLDN3O15551 RNU6-638P-201ENST00000516582 104 ntBASIC-4.16□□□□□ -3.08
CLDN3O15551 MIR545-201ENST00000385085 106 ntBASIC-4.2□□□□□ -3.08
CLDN3O15551 RNU6-930P-201ENST00000390938 100 ntBASIC-4.21□□□□□ -3.08
CLDN3O15551 RNU6-788P-201ENST00000390967 104 ntBASIC-4.21□□□□□ -3.08
CLDN3O15551 SNORA72.7-201ENST00000516349 94 ntBASIC-4.25□□□□□ -3.09
CLDN3O15551 MIR548F3-201ENST00000408509 87 ntBASIC-4.26□□□□□ -3.09
CLDN3O15551 RNU6-422P-201ENST00000384632 107 ntBASIC-4.28□□□□□ -3.09
CLDN3O15551 RNU6-614P-201ENST00000384369 107 ntBASIC-4.36□□□□□ -3.11
CLDN3O15551 U6.59-201ENST00000615686 107 ntBASIC-4.36□□□□□ -3.11
CLDN3O15551 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.42□□□□□ -3.12
CLDN3O15551 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.46□□□□□ -3.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms