Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU7-119P-201ENST00000459279 63 ntBASIC-1□□□□□ -2.57
NPAS1Q99742 RNU6-1206P-201ENST00000516339 103 ntBASIC-1□□□□□ -2.57
NPAS1Q99742 AC120024.2-201ENST00000576526 175 ntBASIC-1□□□□□ -2.57
NPAS1Q99742 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1□□□□□ -2.57
NPAS1Q99742 SNORD18.1-201ENST00000363807 70 ntBASIC-1.01□□□□□ -2.57
NPAS1Q99742 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.01□□□□□ -2.57
NPAS1Q99742 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
NPAS1Q99742 RNA5SP86-201ENST00000390869 98 ntBASIC-1.01□□□□□ -2.57
NPAS1Q99742 MIR23C-201ENST00000579846 100 ntBASIC-1.01□□□□□ -2.57
NPAS1Q99742 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
NPAS1Q99742 RNY3P8-201ENST00000411366 126 ntBASIC-1.02□□□□□ -2.57
NPAS1Q99742 AC138207.3-201ENST00000585289 166 ntBASIC-1.02□□□□□ -2.57
NPAS1Q99742 RNU6-446P-201ENST00000362827 106 ntBASIC-1.03□□□□□ -2.57
NPAS1Q99742 RNU6-520P-201ENST00000384717 104 ntBASIC-1.03□□□□□ -2.57
NPAS1Q99742 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.04□□□□□ -2.58
NPAS1Q99742 MIR4756-201ENST00000577874 78 ntBASIC-1.04□□□□□ -2.58
NPAS1Q99742 AC013734.1-201ENST00000619329 111 ntBASIC-1.04□□□□□ -2.58
NPAS1Q99742 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.05□□□□□ -2.58
NPAS1Q99742 RNU6-980P-201ENST00000516925 103 ntBASIC-1.05□□□□□ -2.58
NPAS1Q99742 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.06□□□□□ -2.58
NPAS1Q99742 MIR3139-201ENST00000579145 76 ntBASIC-1.06□□□□□ -2.58
NPAS1Q99742 MIR4770-201ENST00000579149 58 ntBASIC-1.06□□□□□ -2.58
NPAS1Q99742 RNU6-119P-201ENST00000364882 107 ntBASIC-1.07□□□□□ -2.58
NPAS1Q99742 RNU6-400P-201ENST00000391173 106 ntBASIC-1.08□□□□□ -2.58
NPAS1Q99742 RNU6-590P-201ENST00000365039 107 ntBASIC-1.09□□□□□ -2.58
NPAS1Q99742 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
NPAS1Q99742 AL451105.1-201ENST00000450005 189 ntBASIC-1.1□□□□□ -2.59
NPAS1Q99742 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.1□□□□□ -2.59
NPAS1Q99742 RNU6-419P-201ENST00000517030 63 ntBASIC-1.1□□□□□ -2.59
NPAS1Q99742 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.1□□□□□ -2.59
NPAS1Q99742 RNY4P7-201ENST00000364600 96 ntBASIC-1.11□□□□□ -2.59
NPAS1Q99742 SNORD113-4-201ENST00000364802 75 ntBASIC-1.11□□□□□ -2.59
NPAS1Q99742 MT-TM-201ENST00000387377 68 ntBASIC-1.11□□□□□ -2.59
NPAS1Q99742 AC108019.1-201ENST00000512540 175 ntBASIC-1.11□□□□□ -2.59
NPAS1Q99742 MIR581-201ENST00000384895 96 ntBASIC-1.12□□□□□ -2.59
NPAS1Q99742 MIR202-201ENST00000362219 110 ntBASIC-1.13□□□□□ -2.59
NPAS1Q99742 MIR633-201ENST00000384821 98 ntBASIC-1.13□□□□□ -2.59
NPAS1Q99742 AC139453.2-201ENST00000487255 133 ntBASIC-1.13□□□□□ -2.59
NPAS1Q99742 RNU6-829P-201ENST00000363700 112 ntBASIC-1.14□□□□□ -2.59
NPAS1Q99742 RNU6-530P-201ENST00000391180 107 ntBASIC-1.14□□□□□ -2.59
NPAS1Q99742 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.14□□□□□ -2.59
NPAS1Q99742 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.14□□□□□ -2.59
NPAS1Q99742 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.14□□□□□ -2.59
NPAS1Q99742 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 RNU6-361P-201ENST00000364454 107 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 RNU6-695P-201ENST00000391157 104 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 MIR548H1-201ENST00000408610 102 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 SNORD54-201ENST00000459159 67 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 U6.97-201ENST00000636904 101 ntBASIC-1.15□□□□□ -2.59
NPAS1Q99742 AC125388.1-201ENST00000459631 156 ntBASIC-1.16□□□□□ -2.6
NPAS1Q99742 RNY4-201ENST00000516507 96 ntBASIC-1.16□□□□□ -2.6
NPAS1Q99742 MIR548X-201ENST00000580069 75 ntBASIC-1.16□□□□□ -2.6
NPAS1Q99742 MIR548N-201ENST00000408742 75 ntBASIC-1.17□□□□□ -2.6
NPAS1Q99742 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.18□□□□□ -2.6
NPAS1Q99742 MIR664B-201ENST00000626756 61 ntBASIC-1.18□□□□□ -2.6
NPAS1Q99742 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.19□□□□□ -2.6
NPAS1Q99742 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.19□□□□□ -2.6
NPAS1Q99742 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.19□□□□□ -2.6
NPAS1Q99742 SNORA17.4-201ENST00000391287 132 ntBASIC-1.19□□□□□ -2.6
NPAS1Q99742 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.2□□□□□ -2.6
NPAS1Q99742 RNU6-742P-201ENST00000365289 107 ntBASIC-1.2□□□□□ -2.6
NPAS1Q99742 AC079150.2-201ENST00000443733 78 ntBASIC-1.2□□□□□ -2.6
NPAS1Q99742 MIR3123-201ENST00000583417 75 ntBASIC-1.2□□□□□ -2.6
NPAS1Q99742 SNORD45.2-201ENST00000363552 72 ntBASIC-1.21□□□□□ -2.6
NPAS1Q99742 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.21□□□□□ -2.6
NPAS1Q99742 MIR4426-201ENST00000640330 63 ntBASIC-1.21□□□□□ -2.6
NPAS1Q99742 SNORD60-201ENST00000383903 83 ntBASIC-1.22□□□□□ -2.6
NPAS1Q99742 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.22□□□□□ -2.6
NPAS1Q99742 SNORD18C-201ENST00000362704 69 ntBASIC-1.23□□□□□ -2.61
NPAS1Q99742 RNA5SP405-201ENST00000363059 114 ntBASIC-1.23□□□□□ -2.61
NPAS1Q99742 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.23□□□□□ -2.61
NPAS1Q99742 RNU6-68P-201ENST00000516576 104 ntBASIC-1.23□□□□□ -2.61
NPAS1Q99742 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.24□□□□□ -2.61
NPAS1Q99742 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.25□□□□□ -2.61
NPAS1Q99742 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.26□□□□□ -2.61
NPAS1Q99742 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.27□□□□□ -2.61
NPAS1Q99742 RNU6-841P-201ENST00000383872 107 ntBASIC-1.28□□□□□ -2.61
NPAS1Q99742 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.28□□□□□ -2.61
NPAS1Q99742 RNU6-499P-201ENST00000365615 107 ntBASIC-1.29□□□□□ -2.62
NPAS1Q99742 MIR548W-201ENST00000581970 74 ntBASIC-1.29□□□□□ -2.62
NPAS1Q99742 RNU4-33P-201ENST00000364316 85 ntBASIC-1.3□□□□□ -2.62
NPAS1Q99742 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.3□□□□□ -2.62
NPAS1Q99742 RNU6-300P-201ENST00000459080 104 ntBASIC-1.3□□□□□ -2.62
NPAS1Q99742 MIR548AM-201ENST00000584298 74 ntBASIC-1.3□□□□□ -2.62
NPAS1Q99742 snoU13.10-201ENST00000459301 103 ntBASIC-1.32□□□□□ -2.62
NPAS1Q99742 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.32□□□□□ -2.62
NPAS1Q99742 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.32□□□□□ -2.62
NPAS1Q99742 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.34□□□□□ -2.62
NPAS1Q99742 RNU6-194P-201ENST00000363862 105 ntBASIC-1.35□□□□□ -2.63
NPAS1Q99742 RNU6-176P-201ENST00000517196 105 ntBASIC-1.35□□□□□ -2.63
NPAS1Q99742 RNU6-788P-201ENST00000390967 104 ntBASIC-1.36□□□□□ -2.63
NPAS1Q99742 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.36□□□□□ -2.63
NPAS1Q99742 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.38□□□□□ -2.63
NPAS1Q99742 MIR548H4-201ENST00000408689 111 ntBASIC-1.38□□□□□ -2.63
NPAS1Q99742 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.38□□□□□ -2.63
NPAS1Q99742 MIR379-201ENST00000362218 67 ntBASIC-1.39□□□□□ -2.63
NPAS1Q99742 RNU6-230P-201ENST00000362457 104 ntBASIC-1.39□□□□□ -2.63
NPAS1Q99742 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.39□□□□□ -2.63
NPAS1Q99742 RNU6-912P-201ENST00000363800 104 ntBASIC-1.39□□□□□ -2.63
NPAS1Q99742 RNU4-88P-201ENST00000411220 86 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms