Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR1245B-201ENST00000636115 69 ntBASIC-5.18□□□□□ -3.24
CFAP54Q96N23 Y_RNA.580-201ENST00000391004 95 ntBASIC-5.19□□□□□ -3.24
CFAP54Q96N23 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.2□□□□□ -3.24
CFAP54Q96N23 RNU6-426P-201ENST00000516464 97 ntBASIC-5.21□□□□□ -3.24
CFAP54Q96N23 RNU6-314P-201ENST00000516574 104 ntBASIC-5.21□□□□□ -3.24
CFAP54Q96N23 RNU6-753P-201ENST00000363926 107 ntBASIC-5.22□□□□□ -3.24
CFAP54Q96N23 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.22□□□□□ -3.25
CFAP54Q96N23 U6.111-201ENST00000636093 83 ntBASIC-5.22□□□□□ -3.25
CFAP54Q96N23 RNU6-133P-201ENST00000383989 107 ntBASIC-5.22□□□□□ -3.25
CFAP54Q96N23 Y_RNA.553-201ENST00000384670 102 ntBASIC-5.22□□□□□ -3.25
CFAP54Q96N23 MTND4LP9-201ENST00000427694 174 ntBASIC-5.23□□□□□ -3.25
CFAP54Q96N23 SNORA33.2-201ENST00000365413 134 ntBASIC-5.23□□□□□ -3.25
CFAP54Q96N23 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.24□□□□□ -3.25
CFAP54Q96N23 AL031737.1-201ENST00000450125 223 ntBASIC-5.25□□□□□ -3.25
CFAP54Q96N23 RNU6-463P-201ENST00000384340 107 ntBASIC-5.25□□□□□ -3.25
CFAP54Q96N23 SNORA40-201ENST00000388090 126 ntBASIC-5.25□□□□□ -3.25
CFAP54Q96N23 MIR548F3-201ENST00000408509 87 ntBASIC-5.25□□□□□ -3.25
CFAP54Q96N23 AC022559.1-201ENST00000520905 205 ntBASIC-5.25□□□□□ -3.25
CFAP54Q96N23 MT-TL1-201ENST00000386347 75 ntBASIC-5.26□□□□□ -3.25
CFAP54Q96N23 Y_RNA.619-201ENST00000410951 90 ntBASIC-5.26□□□□□ -3.25
CFAP54Q96N23 Y_RNA.197-201ENST00000364004 102 ntBASIC-5.27□□□□□ -3.25
CFAP54Q96N23 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.27□□□□□ -3.25
CFAP54Q96N23 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.28□□□□□ -3.25
CFAP54Q96N23 RNU6-471P-201ENST00000383944 106 ntBASIC-5.28□□□□□ -3.26
CFAP54Q96N23 AC141273.2-201ENST00000618989 130 ntBASIC-5.28□□□□□ -3.26
CFAP54Q96N23 RNU6-930P-201ENST00000390938 100 ntBASIC-5.29□□□□□ -3.26
CFAP54Q96N23 MIR5588-201ENST00000581890 63 ntBASIC-5.29□□□□□ -3.26
CFAP54Q96N23 RNY4P14-201ENST00000363656 96 ntBASIC-5.29□□□□□ -3.26
CFAP54Q96N23 IGLL4P-201ENST00000614590 133 ntBASIC-5.31□□□□□ -3.26
CFAP54Q96N23 Y_RNA.20-201ENST00000362479 113 ntBASIC-5.31□□□□□ -3.26
CFAP54Q96N23 U6.103-201ENST00000637085 61 ntBASIC-5.32□□□□□ -3.26
CFAP54Q96N23 MIR4666B-201ENST00000578142 81 ntBASIC-5.33□□□□□ -3.26
CFAP54Q96N23 RNU6-1275P-201ENST00000391087 107 ntBASIC-5.34□□□□□ -3.26
CFAP54Q96N23 MTND5P20-201ENST00000448677 143 ntBASIC-5.35□□□□□ -3.27
CFAP54Q96N23 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.36□□□□□ -3.27
CFAP54Q96N23 AC009094.1-201ENST00000564443 426 ntBASIC-5.36□□□□□ -3.27
CFAP54Q96N23 MIR569-201ENST00000385228 96 ntBASIC-5.38□□□□□ -3.27
CFAP54Q96N23 RNU6-956P-201ENST00000458868 103 ntBASIC-5.39□□□□□ -3.27
CFAP54Q96N23 Y_RNA.343-201ENST00000365354 112 ntBASIC-5.39□□□□□ -3.27
CFAP54Q96N23 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.39□□□□□ -3.27
CFAP54Q96N23 AC006362.1-201ENST00000567392 174 ntBASIC-5.39□□□□□ -3.27
CFAP54Q96N23 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.4□□□□□ -3.27
CFAP54Q96N23 RNU6-394P-201ENST00000410735 107 ntBASIC-5.41□□□□□ -3.27
CFAP54Q96N23 Y_RNA.554-201ENST00000384672 102 ntBASIC-5.41□□□□□ -3.28
CFAP54Q96N23 MIR4680-201ENST00000580906 66 ntBASIC-5.41□□□□□ -3.28
CFAP54Q96N23 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.43□□□□□ -3.28
CFAP54Q96N23 SNORD19B-201ENST00000459623 84 ntBASIC-5.43□□□□□ -3.28
CFAP54Q96N23 RNU6-635P-201ENST00000516651 102 ntBASIC-5.43□□□□□ -3.28
CFAP54Q96N23 RNU6-242P-201ENST00000384359 107 ntBASIC-5.44□□□□□ -3.28
CFAP54Q96N23 AL353621.2-201ENST00000605340 133 ntBASIC-5.46□□□□□ -3.28
CFAP54Q96N23 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.46□□□□□ -3.28
CFAP54Q96N23 RNU6-751P-201ENST00000516382 101 ntBASIC-5.46□□□□□ -3.28
CFAP54Q96N23 SNORA26.2-201ENST00000390922 122 ntBASIC-5.47□□□□□ -3.28
CFAP54Q96N23 Y_RNA.431-201ENST00000384086 102 ntBASIC-5.48□□□□□ -3.29
CFAP54Q96N23 DLEU2_4.2-201ENST00000616613 58 ntBASIC-5.49□□□□□ -3.29
CFAP54Q96N23 RNU6-936P-201ENST00000384005 107 ntBASIC-5.51□□□□□ -3.29
CFAP54Q96N23 SNORD11.1-201ENST00000459482 85 ntBASIC-5.53□□□□□ -3.29
CFAP54Q96N23 RNU6-506P-201ENST00000516553 94 ntBASIC-5.54□□□□□ -3.3
CFAP54Q96N23 MIR3688-2-201ENST00000636963 87 ntBASIC-5.55□□□□□ -3.3
CFAP54Q96N23 MIR548F1-201ENST00000408667 84 ntBASIC-5.56□□□□□ -3.3
CFAP54Q96N23 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.56□□□□□ -3.3
CFAP54Q96N23 RNU6-111P-201ENST00000517179 105 ntBASIC-5.57□□□□□ -3.3
CFAP54Q96N23 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.57□□□□□ -3.3
CFAP54Q96N23 RNU6-804P-201ENST00000384286 107 ntBASIC-5.58□□□□□ -3.3
CFAP54Q96N23 MIR488-201ENST00000365739 83 ntBASIC-5.58□□□□□ -3.3
CFAP54Q96N23 MIR450A1-201ENST00000362262 91 ntBASIC-5.6□□□□□ -3.31
CFAP54Q96N23 MIR548T-201ENST00000408369 74 ntBASIC-5.6□□□□□ -3.31
CFAP54Q96N23 RNU6-985P-201ENST00000410182 104 ntBASIC-5.61□□□□□ -3.31
CFAP54Q96N23 MTND5P41-201ENST00000517498 206 ntBASIC-5.61□□□□□ -3.31
CFAP54Q96N23 Y_RNA.297-201ENST00000364950 91 ntBASIC-5.62□□□□□ -3.31
CFAP54Q96N23 MIR3128-201ENST00000581957 66 ntBASIC-5.62□□□□□ -3.31
CFAP54Q96N23 AC079150.2-201ENST00000443733 78 ntBASIC-5.63□□□□□ -3.31
CFAP54Q96N23 RNU6-257P-201ENST00000410238 98 ntBASIC-5.65□□□□□ -3.31
CFAP54Q96N23 RNU6-589P-201ENST00000516485 107 ntBASIC-5.65□□□□□ -3.31
CFAP54Q96N23 MTND4P29-201ENST00000503122 1372 ntBASIC-5.65□□□□□ -3.31
CFAP54Q96N23 RNU6-640P-201ENST00000363693 105 ntBASIC-5.66□□□□□ -3.31
CFAP54Q96N23 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.66□□□□□ -3.31
CFAP54Q96N23 Y_RNA.574-201ENST00000384766 95 ntBASIC-5.66□□□□□ -3.31
CFAP54Q96N23 MIR1277-201ENST00000408536 78 ntBASIC-5.66□□□□□ -3.31
CFAP54Q96N23 RNU6-718P-201ENST00000516166 105 ntBASIC-5.66□□□□□ -3.31
CFAP54Q96N23 SNORD42.2-201ENST00000365570 69 ntBASIC-5.66□□□□□ -3.32
CFAP54Q96N23 MIR1302-1-201ENST00000637932 143 ntBASIC-5.66□□□□□ -3.32
CFAP54Q96N23 Y_RNA.356-201ENST00000365475 113 ntBASIC-5.68□□□□□ -3.32
CFAP54Q96N23 RNU6-1056P-201ENST00000383996 107 ntBASIC-5.68□□□□□ -3.32
CFAP54Q96N23 AC069439.1-201ENST00000494739 167 ntBASIC-5.68□□□□□ -3.32
CFAP54Q96N23 U4.5-201ENST00000617137 123 ntBASIC-5.68□□□□□ -3.32
CFAP54Q96N23 RNY3P1-201ENST00000365085 102 ntBASIC-5.71□□□□□ -3.32
CFAP54Q96N23 RNU7-120P-201ENST00000459334 63 ntBASIC-5.71□□□□□ -3.32
CFAP54Q96N23 RNU6-1137P-201ENST00000517073 99 ntBASIC-5.71□□□□□ -3.32
CFAP54Q96N23 RNU6-49P-201ENST00000384256 107 ntBASIC-5.72□□□□□ -3.32
CFAP54Q96N23 SNORD116-14-201ENST00000383894 92 ntBASIC-5.73□□□□□ -3.33
CFAP54Q96N23 SNORD116-17-201ENST00000383929 92 ntBASIC-5.73□□□□□ -3.33
CFAP54Q96N23 SNORD116-15-201ENST00000384445 92 ntBASIC-5.73□□□□□ -3.33
CFAP54Q96N23 SNORD116-19-201ENST00000384729 92 ntBASIC-5.73□□□□□ -3.33
CFAP54Q96N23 MIR633-201ENST00000384821 98 ntBASIC-5.74□□□□□ -3.33
CFAP54Q96N23 RNU6-1023P-201ENST00000516137 106 ntBASIC-5.75□□□□□ -3.33
CFAP54Q96N23 MIR3671-201ENST00000580455 88 ntBASIC-5.77□□□□□ -3.33
CFAP54Q96N23 Y_RNA.160-201ENST00000363677 92 ntBASIC-5.77□□□□□ -3.33
CFAP54Q96N23 AC008267.6-201ENST00000441664 139 ntBASIC-5.77□□□□□ -3.33
CFAP54Q96N23 RNU6-200P-201ENST00000364743 107 ntBASIC-5.78□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms