Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.72□□□□□ -2.68
TTC28Q96AY4 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.73□□□□□ -2.69
TTC28Q96AY4 MIR3938-201ENST00000582157 103 ntBASIC-1.73□□□□□ -2.69
TTC28Q96AY4 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.74□□□□□ -2.69
TTC28Q96AY4 RNU6-231P-201ENST00000517122 103 ntBASIC-1.74□□□□□ -2.69
TTC28Q96AY4 MIR4801-201ENST00000582704 82 ntBASIC-1.74□□□□□ -2.69
TTC28Q96AY4 SNORD116-21-201ENST00000384507 92 ntBASIC-1.75□□□□□ -2.69
TTC28Q96AY4 AC004792.1-201ENST00000614523 137 ntBASIC-1.75□□□□□ -2.69
TTC28Q96AY4 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.75□□□□□ -2.69
TTC28Q96AY4 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 MTATP8P1-201ENST00000467115 207 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 RNU6-315P-201ENST00000362666 107 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 SNORA20.1-201ENST00000364790 130 ntBASIC-1.76□□□□□ -2.69
TTC28Q96AY4 MTND5P41-201ENST00000517498 206 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 U6.95-201ENST00000636931 70 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 RNU6-109P-201ENST00000516364 107 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 RNU6-184P-201ENST00000516514 107 ntBASIC-1.77□□□□□ -2.69
TTC28Q96AY4 MIR548F4-201ENST00000408515 105 ntBASIC-1.78□□□□□ -2.69
TTC28Q96AY4 RNU7-171P-201ENST00000459581 62 ntBASIC-1.78□□□□□ -2.69
TTC28Q96AY4 RNU6-294P-201ENST00000364999 102 ntBASIC-1.78□□□□□ -2.69
TTC28Q96AY4 RNU6-394P-201ENST00000410735 107 ntBASIC-1.78□□□□□ -2.69
TTC28Q96AY4 AC062037.2-201ENST00000610137 73 ntBASIC-1.78□□□□□ -2.69
TTC28Q96AY4 AL157777.2-201ENST00000258070 137 ntBASIC-1.79□□□□□ -2.7
TTC28Q96AY4 RNU4-33P-201ENST00000364316 85 ntBASIC-1.79□□□□□ -2.7
TTC28Q96AY4 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.79□□□□□ -2.7
TTC28Q96AY4 RNU6-804P-201ENST00000384286 107 ntBASIC-1.79□□□□□ -2.7
TTC28Q96AY4 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.79□□□□□ -2.7
TTC28Q96AY4 AL031737.1-201ENST00000450125 223 ntBASIC-1.8□□□□□ -2.7
TTC28Q96AY4 RNU6-844P-201ENST00000517175 102 ntBASIC-1.8□□□□□ -2.7
TTC28Q96AY4 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.8□□□□□ -2.7
TTC28Q96AY4 MIR4666B-201ENST00000578142 81 ntBASIC-1.81□□□□□ -2.7
TTC28Q96AY4 RNU6-209P-201ENST00000384118 107 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 RNU6-659P-201ENST00000516454 104 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 SNORA63.4-201ENST00000362763 126 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 RNU6-675P-201ENST00000384236 104 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.82□□□□□ -2.7
TTC28Q96AY4 RNU6-255P-201ENST00000516957 105 ntBASIC-1.82□□□□□ -2.7
TTC28Q96AY4 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 MIR569-201ENST00000385228 96 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 AL451105.1-201ENST00000450005 189 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 MIR548S-201ENST00000581352 82 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 AC008737.2-201ENST00000599446 118 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 MIR548BB-201ENST00000626714 66 ntBASIC-1.83□□□□□ -2.7
TTC28Q96AY4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
TTC28Q96AY4 MIR548AL-201ENST00000578416 97 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 RNU6-219P-201ENST00000364728 107 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 MIR606-201ENST00000384851 96 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 RNU6-388P-201ENST00000517012 105 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 RNU6-389P-201ENST00000517048 105 ntBASIC-1.84□□□□□ -2.7
TTC28Q96AY4 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 RNU6-419P-201ENST00000517030 63 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 RNU6-808P-201ENST00000391233 108 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 RNU6-257P-201ENST00000410238 98 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 MIR3914-2-201ENST00000637339 95 ntBASIC-1.85□□□□□ -2.71
TTC28Q96AY4 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.86□□□□□ -2.71
TTC28Q96AY4 MTCYBP6-201ENST00000441810 138 ntBASIC-1.86□□□□□ -2.71
TTC28Q96AY4 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.86□□□□□ -2.71
TTC28Q96AY4 MIR450A1-201ENST00000362262 91 ntBASIC-1.87□□□□□ -2.71
TTC28Q96AY4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.87□□□□□ -2.71
TTC28Q96AY4 SNORD111B-201ENST00000408587 80 ntBASIC-1.87□□□□□ -2.71
TTC28Q96AY4 MIR5588-201ENST00000581890 63 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 MIR4511-201ENST00000582784 87 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 RNU6-787P-201ENST00000384032 107 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 RNU6-959P-201ENST00000384671 107 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 RNU7-120P-201ENST00000459334 63 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 MALAT1.1-201ENST00000618249 95 ntBASIC-1.88□□□□□ -2.71
TTC28Q96AY4 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.89□□□□□ -2.71
TTC28Q96AY4 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.89□□□□□ -2.71
TTC28Q96AY4 MIR548T-201ENST00000408369 74 ntBASIC-1.89□□□□□ -2.71
TTC28Q96AY4 RNU7-200P-201ENST00000516105 62 ntBASIC-1.89□□□□□ -2.71
TTC28Q96AY4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.89□□□□□ -2.71
TTC28Q96AY4 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.9□□□□□ -2.71
TTC28Q96AY4 MIR568-201ENST00000385036 95 ntBASIC-1.9□□□□□ -2.71
TTC28Q96AY4 MTCYBP9-201ENST00000431021 303 ntBASIC-1.9□□□□□ -2.71
TTC28Q96AY4 RNU6-634P-201ENST00000459134 106 ntBASIC-1.9□□□□□ -2.71
TTC28Q96AY4 RNU6-589P-201ENST00000516485 107 ntBASIC-1.91□□□□□ -2.71
TTC28Q96AY4 RNU6-687P-201ENST00000516443 89 ntBASIC-1.91□□□□□ -2.72
TTC28Q96AY4 RNU6-200P-201ENST00000364743 107 ntBASIC-1.92□□□□□ -2.72
TTC28Q96AY4 AL117351.2-201ENST00000513571 157 ntBASIC-1.92□□□□□ -2.72
TTC28Q96AY4 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.92□□□□□ -2.72
TTC28Q96AY4 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.92□□□□□ -2.72
TTC28Q96AY4 SNORA25.4-201ENST00000363666 124 ntBASIC-1.93□□□□□ -2.72
TTC28Q96AY4 RNY4P30-201ENST00000410216 95 ntBASIC-1.93□□□□□ -2.72
TTC28Q96AY4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.93□□□□□ -2.72
TTC28Q96AY4 MIR1255A-201ENST00000408338 113 ntBASIC-1.93□□□□□ -2.72
TTC28Q96AY4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.93□□□□□ -2.72
TTC28Q96AY4 RNU6-59P-201ENST00000384787 107 ntBASIC-1.95□□□□□ -2.72
TTC28Q96AY4 MIR3134-201ENST00000579433 74 ntBASIC-1.95□□□□□ -2.72
TTC28Q96AY4 MIR1302-3-201ENST00000408128 138 ntBASIC-1.95□□□□□ -2.72
TTC28Q96AY4 AC110620.1-201ENST00000416042 228 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms