Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-1275P-201ENST00000391087 107 ntBASIC-5.42□□□□□ -3.28
VPS13CQ709C8 MIR4712-201ENST00000583750 82 ntBASIC-5.42□□□□□ -3.28
VPS13CQ709C8 MIR548F3-201ENST00000408509 87 ntBASIC-5.42□□□□□ -3.28
VPS13CQ709C8 Y_RNA.662-201ENST00000516028 97 ntBASIC-5.42□□□□□ -3.28
VPS13CQ709C8 RNU6-930P-201ENST00000390938 100 ntBASIC-5.43□□□□□ -3.28
VPS13CQ709C8 AC113195.1-201ENST00000579952 141 ntBASIC-5.43□□□□□ -3.28
VPS13CQ709C8 SNORD116-18-201ENST00000383961 92 ntBASIC-5.45□□□□□ -3.28
VPS13CQ709C8 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.45□□□□□ -3.28
VPS13CQ709C8 RNU7-171P-201ENST00000459581 62 ntBASIC-5.45□□□□□ -3.28
VPS13CQ709C8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.46□□□□□ -3.28
VPS13CQ709C8 MALAT1.1-201ENST00000618249 95 ntBASIC-5.47□□□□□ -3.28
VPS13CQ709C8 Y_RNA.20-201ENST00000362479 113 ntBASIC-5.47□□□□□ -3.29
VPS13CQ709C8 Y_RNA.712-201ENST00000517011 92 ntBASIC-5.47□□□□□ -3.29
VPS13CQ709C8 AC141273.2-201ENST00000618989 130 ntBASIC-5.47□□□□□ -3.29
VPS13CQ709C8 RNU6-426P-201ENST00000516464 97 ntBASIC-5.48□□□□□ -3.29
VPS13CQ709C8 AC022559.1-201ENST00000520905 205 ntBASIC-5.48□□□□□ -3.29
VPS13CQ709C8 RNY4P14-201ENST00000363656 96 ntBASIC-5.49□□□□□ -3.29
VPS13CQ709C8 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 AL031737.1-201ENST00000450125 223 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 RNU6-713P-201ENST00000384761 107 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 U6.111-201ENST00000636093 83 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 RNU6-471P-201ENST00000383944 106 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 MIR548T-201ENST00000408369 74 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 AC004792.1-201ENST00000614523 137 ntBASIC-5.5□□□□□ -3.29
VPS13CQ709C8 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.51□□□□□ -3.29
VPS13CQ709C8 Y_RNA.580-201ENST00000391004 95 ntBASIC-5.53□□□□□ -3.29
VPS13CQ709C8 IGLL4P-201ENST00000614590 133 ntBASIC-5.53□□□□□ -3.3
VPS13CQ709C8 Y_RNA.197-201ENST00000364004 102 ntBASIC-5.56□□□□□ -3.3
VPS13CQ709C8 RNU6-277P-201ENST00000516272 106 ntBASIC-5.57□□□□□ -3.3
VPS13CQ709C8 SNORA40-201ENST00000388090 126 ntBASIC-5.59□□□□□ -3.3
VPS13CQ709C8 RNU6-956P-201ENST00000458868 103 ntBASIC-5.59□□□□□ -3.3
VPS13CQ709C8 RNU6-394P-201ENST00000410735 107 ntBASIC-5.6□□□□□ -3.31
VPS13CQ709C8 AC009094.1-201ENST00000564443 426 ntBASIC-5.61□□□□□ -3.31
VPS13CQ709C8 AL353621.2-201ENST00000605340 133 ntBASIC-5.61□□□□□ -3.31
VPS13CQ709C8 Y_RNA.554-201ENST00000384672 102 ntBASIC-5.61□□□□□ -3.31
VPS13CQ709C8 AC006362.1-201ENST00000567392 174 ntBASIC-5.61□□□□□ -3.31
VPS13CQ709C8 Y_RNA.553-201ENST00000384670 102 ntBASIC-5.62□□□□□ -3.31
VPS13CQ709C8 MIR5588-201ENST00000581890 63 ntBASIC-5.62□□□□□ -3.31
VPS13CQ709C8 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.62□□□□□ -3.31
VPS13CQ709C8 MIR4666B-201ENST00000578142 81 ntBASIC-5.63□□□□□ -3.31
VPS13CQ709C8 MIR4680-201ENST00000580906 66 ntBASIC-5.64□□□□□ -3.31
VPS13CQ709C8 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.64□□□□□ -3.31
VPS13CQ709C8 RNU6-506P-201ENST00000516553 94 ntBASIC-5.64□□□□□ -3.31
VPS13CQ709C8 MTND5P20-201ENST00000448677 143 ntBASIC-5.67□□□□□ -3.32
VPS13CQ709C8 Y_RNA.619-201ENST00000410951 90 ntBASIC-5.67□□□□□ -3.32
VPS13CQ709C8 RNU6-242P-201ENST00000384359 107 ntBASIC-5.68□□□□□ -3.32
VPS13CQ709C8 Y_RNA.343-201ENST00000365354 112 ntBASIC-5.68□□□□□ -3.32
VPS13CQ709C8 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.7□□□□□ -3.32
VPS13CQ709C8 SNORD11.1-201ENST00000459482 85 ntBASIC-5.71□□□□□ -3.32
VPS13CQ709C8 DLEU2_4.2-201ENST00000616613 58 ntBASIC-5.71□□□□□ -3.32
VPS13CQ709C8 RNU6-936P-201ENST00000384005 107 ntBASIC-5.71□□□□□ -3.32
VPS13CQ709C8 RNU6-751P-201ENST00000516382 101 ntBASIC-5.71□□□□□ -3.32
VPS13CQ709C8 MIR569-201ENST00000385228 96 ntBASIC-5.72□□□□□ -3.32
VPS13CQ709C8 MIR3688-2-201ENST00000636963 87 ntBASIC-5.74□□□□□ -3.33
VPS13CQ709C8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.75□□□□□ -3.33
VPS13CQ709C8 SNORD19B-201ENST00000459623 84 ntBASIC-5.75□□□□□ -3.33
VPS13CQ709C8 RNU6-635P-201ENST00000516651 102 ntBASIC-5.76□□□□□ -3.33
VPS13CQ709C8 RNU6-804P-201ENST00000384286 107 ntBASIC-5.76□□□□□ -3.33
VPS13CQ709C8 RNU6-985P-201ENST00000410182 104 ntBASIC-5.77□□□□□ -3.33
VPS13CQ709C8 Y_RNA.431-201ENST00000384086 102 ntBASIC-5.77□□□□□ -3.33
VPS13CQ709C8 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.8□□□□□ -3.34
VPS13CQ709C8 U4.5-201ENST00000617137 123 ntBASIC-5.8□□□□□ -3.34
VPS13CQ709C8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.81□□□□□ -3.34
VPS13CQ709C8 SNORA26.2-201ENST00000390922 122 ntBASIC-5.81□□□□□ -3.34
VPS13CQ709C8 Y_RNA.160-201ENST00000363677 92 ntBASIC-5.82□□□□□ -3.34
VPS13CQ709C8 RNU6-589P-201ENST00000516485 107 ntBASIC-5.84□□□□□ -3.34
VPS13CQ709C8 RNU6-257P-201ENST00000410238 98 ntBASIC-5.84□□□□□ -3.34
VPS13CQ709C8 RNU7-120P-201ENST00000459334 63 ntBASIC-5.84□□□□□ -3.34
VPS13CQ709C8 MIR3128-201ENST00000581957 66 ntBASIC-5.84□□□□□ -3.34
VPS13CQ709C8 MIR1277-201ENST00000408536 78 ntBASIC-5.84□□□□□ -3.34
VPS13CQ709C8 MIR548F1-201ENST00000408667 84 ntBASIC-5.86□□□□□ -3.35
VPS13CQ709C8 AC079150.2-201ENST00000443733 78 ntBASIC-5.87□□□□□ -3.35
VPS13CQ709C8 RNU6-1137P-201ENST00000517073 99 ntBASIC-5.88□□□□□ -3.35
VPS13CQ709C8 RNU6-1023P-201ENST00000516137 106 ntBASIC-5.89□□□□□ -3.35
VPS13CQ709C8 MIR488-201ENST00000365739 83 ntBASIC-5.9□□□□□ -3.35
VPS13CQ709C8 SNORD42.2-201ENST00000365570 69 ntBASIC-5.91□□□□□ -3.36
VPS13CQ709C8 RNU6-111P-201ENST00000517179 105 ntBASIC-5.91□□□□□ -3.36
VPS13CQ709C8 MIR450A1-201ENST00000362262 91 ntBASIC-5.92□□□□□ -3.36
VPS13CQ709C8 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.93□□□□□ -3.36
VPS13CQ709C8 Y_RNA.574-201ENST00000384766 95 ntBASIC-5.93□□□□□ -3.36
VPS13CQ709C8 SNORA20.1-201ENST00000364790 130 ntBASIC-5.93□□□□□ -3.36
VPS13CQ709C8 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.94□□□□□ -3.36
VPS13CQ709C8 MTND4P29-201ENST00000503122 1372 ntBASIC-5.94□□□□□ -3.36
VPS13CQ709C8 Y_RNA.297-201ENST00000364950 91 ntBASIC-5.94□□□□□ -3.36
VPS13CQ709C8 RNU6-499P-201ENST00000365615 107 ntBASIC-5.95□□□□□ -3.36
VPS13CQ709C8 RNU6-49P-201ENST00000384256 107 ntBASIC-5.96□□□□□ -3.36
VPS13CQ709C8 MIR1302-1-201ENST00000637932 143 ntBASIC-5.97□□□□□ -3.36
VPS13CQ709C8 MIR633-201ENST00000384821 98 ntBASIC-5.98□□□□□ -3.37
VPS13CQ709C8 MTND5P41-201ENST00000517498 206 ntBASIC-5.99□□□□□ -3.37
VPS13CQ709C8 RNU6-32P-201ENST00000383948 107 ntBASIC-5.99□□□□□ -3.37
VPS13CQ709C8 RNU6-13P-201ENST00000384248 107 ntBASIC-5.99□□□□□ -3.37
VPS13CQ709C8 RNU6-12P-201ENST00000384604 107 ntBASIC-5.99□□□□□ -3.37
VPS13CQ709C8 RNU6-41P-201ENST00000384741 107 ntBASIC-5.99□□□□□ -3.37
VPS13CQ709C8 RNY3P1-201ENST00000365085 102 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 RNU6-724P-201ENST00000390958 105 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 RNU6-200P-201ENST00000364743 107 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 Y_RNA.356-201ENST00000365475 113 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 RNU6-820P-201ENST00000384273 107 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 MTATP6P25-201ENST00000574491 261 ntBASIC-6□□□□□ -3.37
VPS13CQ709C8 Y_RNA.350-201ENST00000365409 98 ntBASIC-6.03□□□□□ -3.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms