Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.68□□□□□ -3.32
CCDC58Q4VC31 MIR548AL-201ENST00000578416 97 ntBASIC-5.68□□□□□ -3.32
CCDC58Q4VC31 MTND4P29-201ENST00000503122 1372 ntBASIC-5.68□□□□□ -3.32
CCDC58Q4VC31 SNORA40-201ENST00000388090 126 ntBASIC-5.69□□□□□ -3.32
CCDC58Q4VC31 SNORA25.4-201ENST00000363666 124 ntBASIC-5.7□□□□□ -3.32
CCDC58Q4VC31 RNU6-663P-201ENST00000391105 106 ntBASIC-5.7□□□□□ -3.32
CCDC58Q4VC31 MTATP8P1-201ENST00000467115 207 ntBASIC-5.71□□□□□ -3.32
CCDC58Q4VC31 MIR3128-201ENST00000581957 66 ntBASIC-5.72□□□□□ -3.33
CCDC58Q4VC31 RNU6-804P-201ENST00000384286 107 ntBASIC-5.73□□□□□ -3.33
CCDC58Q4VC31 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.74□□□□□ -3.33
CCDC58Q4VC31 RNU7-120P-201ENST00000459334 63 ntBASIC-5.74□□□□□ -3.33
CCDC58Q4VC31 MIR4712-201ENST00000583750 82 ntBASIC-5.74□□□□□ -3.33
CCDC58Q4VC31 MALAT1.1-201ENST00000618249 95 ntBASIC-5.74□□□□□ -3.33
CCDC58Q4VC31 RNU6-257P-201ENST00000410238 98 ntBASIC-5.75□□□□□ -3.33
CCDC58Q4VC31 MIR3171-201ENST00000584270 74 ntBASIC-5.75□□□□□ -3.33
CCDC58Q4VC31 U6atac.1-201ENST00000616025 117 ntBASIC-5.75□□□□□ -3.33
CCDC58Q4VC31 Y_RNA.350-201ENST00000365409 98 ntBASIC-5.78□□□□□ -3.33
CCDC58Q4VC31 MIR4511-201ENST00000582784 87 ntBASIC-5.78□□□□□ -3.33
CCDC58Q4VC31 Y_RNA.297-201ENST00000364950 91 ntBASIC-5.79□□□□□ -3.34
CCDC58Q4VC31 RNU6-1023P-201ENST00000516137 106 ntBASIC-5.8□□□□□ -3.34
CCDC58Q4VC31 RNU6-808P-201ENST00000391233 108 ntBASIC-5.81□□□□□ -3.34
CCDC58Q4VC31 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.82□□□□□ -3.34
CCDC58Q4VC31 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.83□□□□□ -3.34
CCDC58Q4VC31 RNU6-634P-201ENST00000459134 106 ntBASIC-5.83□□□□□ -3.34
CCDC58Q4VC31 Y_RNA.138-201ENST00000363462 102 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 SNORA20.1-201ENST00000364790 130 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 MT-TD-201ENST00000387419 68 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 MIR1245B-201ENST00000636115 69 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 AC103706.3-201ENST00000636297 85 ntBASIC-5.85□□□□□ -3.35
CCDC58Q4VC31 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.86□□□□□ -3.35
CCDC58Q4VC31 MTND5P41-201ENST00000517498 206 ntBASIC-5.87□□□□□ -3.35
CCDC58Q4VC31 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.89□□□□□ -3.35
CCDC58Q4VC31 RNU6-959P-201ENST00000384671 107 ntBASIC-5.89□□□□□ -3.35
CCDC58Q4VC31 MIR548F4-201ENST00000408515 105 ntBASIC-5.89□□□□□ -3.35
CCDC58Q4VC31 RNU6-844P-201ENST00000517175 102 ntBASIC-5.89□□□□□ -3.35
CCDC58Q4VC31 MIR3908-201ENST00000579798 126 ntBASIC-5.9□□□□□ -3.35
CCDC58Q4VC31 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.91□□□□□ -3.36
CCDC58Q4VC31 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.91□□□□□ -3.36
CCDC58Q4VC31 MIR5588-201ENST00000581890 63 ntBASIC-5.91□□□□□ -3.36
CCDC58Q4VC31 Y_RNA.619-201ENST00000410951 90 ntBASIC-5.92□□□□□ -3.36
CCDC58Q4VC31 RNU6-916P-201ENST00000516088 109 ntBASIC-5.94□□□□□ -3.36
CCDC58Q4VC31 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.94□□□□□ -3.36
CCDC58Q4VC31 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.95□□□□□ -3.36
CCDC58Q4VC31 RNU4-33P-201ENST00000364316 85 ntBASIC-5.96□□□□□ -3.36
CCDC58Q4VC31 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.96□□□□□ -3.36
CCDC58Q4VC31 SNORD30.1-201ENST00000391309 70 ntBASIC-5.96□□□□□ -3.36
CCDC58Q4VC31 RNU6-209P-201ENST00000384118 107 ntBASIC-5.98□□□□□ -3.37
CCDC58Q4VC31 SNORA40.13-201ENST00000516379 120 ntBASIC-5.99□□□□□ -3.37
CCDC58Q4VC31 MIR488-201ENST00000365739 83 ntBASIC-6□□□□□ -3.37
CCDC58Q4VC31 AC026407.1-201ENST00000518369 204 ntBASIC-6□□□□□ -3.37
CCDC58Q4VC31 RNU6-59P-201ENST00000384787 107 ntBASIC-6.01□□□□□ -3.37
CCDC58Q4VC31 Y_RNA.343-201ENST00000365354 112 ntBASIC-6.03□□□□□ -3.37
CCDC58Q4VC31 Y_RNA.593-201ENST00000410292 98 ntBASIC-6.03□□□□□ -3.37
CCDC58Q4VC31 AC110620.1-201ENST00000416042 228 ntBASIC-6.03□□□□□ -3.37
CCDC58Q4VC31 MTND5P20-201ENST00000448677 143 ntBASIC-6.03□□□□□ -3.37
CCDC58Q4VC31 RNU7-171P-201ENST00000459581 62 ntBASIC-6.03□□□□□ -3.37
CCDC58Q4VC31 RNU6-446P-201ENST00000362827 106 ntBASIC-6.05□□□□□ -3.38
CCDC58Q4VC31 RNU6-627P-201ENST00000364032 102 ntBASIC-6.05□□□□□ -3.38
CCDC58Q4VC31 Y_RNA.702-201ENST00000516843 96 ntBASIC-6.06□□□□□ -3.38
CCDC58Q4VC31 AC062037.2-201ENST00000610137 73 ntBASIC-6.06□□□□□ -3.38
CCDC58Q4VC31 IGLL4P-201ENST00000614590 133 ntBASIC-6.06□□□□□ -3.38
CCDC58Q4VC31 Y_RNA.149-201ENST00000363558 117 ntBASIC-6.07□□□□□ -3.38
CCDC58Q4VC31 U6.111-201ENST00000636093 83 ntBASIC-6.07□□□□□ -3.38
CCDC58Q4VC31 SNORD116-14-201ENST00000383894 92 ntBASIC-6.08□□□□□ -3.38
CCDC58Q4VC31 SNORD116-17-201ENST00000383929 92 ntBASIC-6.08□□□□□ -3.38
CCDC58Q4VC31 SNORD116-15-201ENST00000384445 92 ntBASIC-6.08□□□□□ -3.38
CCDC58Q4VC31 SNORD116-19-201ENST00000384729 92 ntBASIC-6.08□□□□□ -3.38
CCDC58Q4VC31 MIR450A1-201ENST00000362262 91 ntBASIC-6.11□□□□□ -3.39
CCDC58Q4VC31 AL117187.1-201ENST00000555482 181 ntBASIC-6.11□□□□□ -3.39
CCDC58Q4VC31 U7.4-201ENST00000614961 63 ntBASIC-6.12□□□□□ -3.39
CCDC58Q4VC31 AL031737.1-201ENST00000450125 223 ntBASIC-6.13□□□□□ -3.39
CCDC58Q4VC31 AC114801.3-201ENST00000510231 177 ntBASIC-6.14□□□□□ -3.39
CCDC58Q4VC31 MIR4679-1-201ENST00000637619 75 ntBASIC-6.14□□□□□ -3.39
CCDC58Q4VC31 Y_RNA.15-201ENST00000362420 102 ntBASIC-6.15□□□□□ -3.39
CCDC58Q4VC31 AL353621.2-201ENST00000605340 133 ntBASIC-6.15□□□□□ -3.39
CCDC58Q4VC31 RNU7-200P-201ENST00000516105 62 ntBASIC-6.16□□□□□ -3.4
CCDC58Q4VC31 RNU6-589P-201ENST00000516485 107 ntBASIC-6.16□□□□□ -3.4
CCDC58Q4VC31 Y_RNA.545-201ENST00000384652 105 ntBASIC-6.17□□□□□ -3.4
CCDC58Q4VC31 RNU6-539P-201ENST00000516665 103 ntBASIC-6.17□□□□□ -3.4
CCDC58Q4VC31 SNORD113-4-201ENST00000364802 75 ntBASIC-6.18□□□□□ -3.4
CCDC58Q4VC31 RNU6-838P-201ENST00000363399 108 ntBASIC-6.22□□□□□ -3.41
CCDC58Q4VC31 RNU6-200P-201ENST00000364743 107 ntBASIC-6.22□□□□□ -3.41
CCDC58Q4VC31 RNU6-986P-201ENST00000363133 102 ntBASIC-6.23□□□□□ -3.41
CCDC58Q4VC31 RNU6-640P-201ENST00000363693 105 ntBASIC-6.23□□□□□ -3.41
CCDC58Q4VC31 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.23□□□□□ -3.41
CCDC58Q4VC31 SNORD113-1-201ENST00000365321 69 ntBASIC-6.25□□□□□ -3.41
CCDC58Q4VC31 RNU6-871P-201ENST00000516122 100 ntBASIC-6.26□□□□□ -3.41
CCDC58Q4VC31 Y_RNA.422-201ENST00000384054 114 ntBASIC-6.27□□□□□ -3.41
CCDC58Q4VC31 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-6.27□□□□□ -3.41
CCDC58Q4VC31 AC090425.1-201ENST00000610007 140 ntBASIC-6.27□□□□□ -3.41
CCDC58Q4VC31 RNU6-620P-201ENST00000384017 96 ntBASIC-6.28□□□□□ -3.41
CCDC58Q4VC31 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-6.29□□□□□ -3.42
CCDC58Q4VC31 MTCYBP6-201ENST00000441810 138 ntBASIC-6.29□□□□□ -3.42
CCDC58Q4VC31 RNU6-346P-201ENST00000516288 111 ntBASIC-6.29□□□□□ -3.42
CCDC58Q4VC31 MIR4666B-201ENST00000578142 81 ntBASIC-6.29□□□□□ -3.42
CCDC58Q4VC31 MIR1302-3-201ENST00000408128 138 ntBASIC-6.31□□□□□ -3.42
CCDC58Q4VC31 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-6.32□□□□□ -3.42
CCDC58Q4VC31 Y_RNA.261-201ENST00000364631 102 ntBASIC-6.34□□□□□ -3.42
CCDC58Q4VC31 MIR568-201ENST00000385036 95 ntBASIC-6.35□□□□□ -3.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms