Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 RNU6-122P-201ENST00000516818 107 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 MIR4511-201ENST00000582784 87 ntBASIC-1.23□□□□□ -2.61
EFNA3P52797 SNORA27.2-201ENST00000363365 126 ntBASIC-1.24□□□□□ -2.61
EFNA3P52797 RNU6-669P-201ENST00000365575 107 ntBASIC-1.24□□□□□ -2.61
EFNA3P52797 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.24□□□□□ -2.61
EFNA3P52797 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.24□□□□□ -2.61
EFNA3P52797 RNU6-231P-201ENST00000517122 103 ntBASIC-1.24□□□□□ -2.61
EFNA3P52797 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.25□□□□□ -2.61
EFNA3P52797 SNORD116.2-201ENST00000391251 93 ntBASIC-1.25□□□□□ -2.61
EFNA3P52797 RNU7-119P-201ENST00000459279 63 ntBASIC-1.25□□□□□ -2.61
EFNA3P52797 RNU6-940P-201ENST00000363433 104 ntBASIC-1.26□□□□□ -2.61
EFNA3P52797 MIR125B1-201ENST00000385236 88 ntBASIC-1.26□□□□□ -2.61
EFNA3P52797 RNU6-400P-201ENST00000391173 106 ntBASIC-1.26□□□□□ -2.61
EFNA3P52797 RNU6-828P-201ENST00000364876 107 ntBASIC-1.27□□□□□ -2.61
EFNA3P52797 RNU6-79P-201ENST00000362511 107 ntBASIC-1.28□□□□□ -2.61
EFNA3P52797 RNU6-194P-201ENST00000363862 105 ntBASIC-1.28□□□□□ -2.61
EFNA3P52797 RNU6-810P-201ENST00000364001 107 ntBASIC-1.28□□□□□ -2.61
EFNA3P52797 RNU6-800P-201ENST00000384473 103 ntBASIC-1.28□□□□□ -2.61
EFNA3P52797 RNU6-803P-201ENST00000516034 102 ntBASIC-1.28□□□□□ -2.61
EFNA3P52797 RNU6-258P-201ENST00000390884 101 ntBASIC-1.29□□□□□ -2.62
EFNA3P52797 AC120024.2-201ENST00000576526 175 ntBASIC-1.29□□□□□ -2.62
EFNA3P52797 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.29□□□□□ -2.62
EFNA3P52797 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.29□□□□□ -2.62
EFNA3P52797 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.3□□□□□ -2.62
EFNA3P52797 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.3□□□□□ -2.62
EFNA3P52797 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.31□□□□□ -2.62
EFNA3P52797 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
EFNA3P52797 SNORA40B-201ENST00000385573 128 ntBASIC-1.32□□□□□ -2.62
EFNA3P52797 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.32□□□□□ -2.62
EFNA3P52797 RNU6-230P-201ENST00000362457 104 ntBASIC-1.33□□□□□ -2.62
EFNA3P52797 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.34□□□□□ -2.62
EFNA3P52797 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.35□□□□□ -2.63
EFNA3P52797 MIR466-201ENST00000580653 84 ntBASIC-1.35□□□□□ -2.63
EFNA3P52797 RNU6-520P-201ENST00000384717 104 ntBASIC-1.36□□□□□ -2.63
EFNA3P52797 SNORA72.7-201ENST00000516349 94 ntBASIC-1.36□□□□□ -2.63
EFNA3P52797 MIR3938-201ENST00000582157 103 ntBASIC-1.36□□□□□ -2.63
EFNA3P52797 SNORD45.2-201ENST00000363552 72 ntBASIC-1.37□□□□□ -2.63
EFNA3P52797 RNU6-563P-201ENST00000364872 108 ntBASIC-1.37□□□□□ -2.63
EFNA3P52797 RNU6-974P-201ENST00000384099 108 ntBASIC-1.37□□□□□ -2.63
EFNA3P52797 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.38□□□□□ -2.63
EFNA3P52797 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.38□□□□□ -2.63
EFNA3P52797 RNU4-88P-201ENST00000411220 86 ntBASIC-1.39□□□□□ -2.63
EFNA3P52797 AC110620.1-201ENST00000416042 228 ntBASIC-1.39□□□□□ -2.63
EFNA3P52797 AC114801.3-201ENST00000510231 177 ntBASIC-1.39□□□□□ -2.63
EFNA3P52797 SNORA40.16-201ENST00000517238 121 ntBASIC-1.39□□□□□ -2.63
EFNA3P52797 RNU6-695P-201ENST00000391157 104 ntBASIC-1.4□□□□□ -2.63
EFNA3P52797 RNY3P8-201ENST00000411366 126 ntBASIC-1.4□□□□□ -2.63
EFNA3P52797 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.4□□□□□ -2.63
EFNA3P52797 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.42□□□□□ -2.64
EFNA3P52797 RNU6-471P-201ENST00000383944 106 ntBASIC-1.42□□□□□ -2.64
EFNA3P52797 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.44□□□□□ -2.64
EFNA3P52797 SNORD60-201ENST00000383903 83 ntBASIC-1.44□□□□□ -2.64
EFNA3P52797 AC013734.1-201ENST00000619329 111 ntBASIC-1.44□□□□□ -2.64
EFNA3P52797 U6.97-201ENST00000636904 101 ntBASIC-1.44□□□□□ -2.64
EFNA3P52797 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.45□□□□□ -2.64
EFNA3P52797 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
EFNA3P52797 AL451105.1-201ENST00000450005 189 ntBASIC-1.46□□□□□ -2.64
EFNA3P52797 MIR202-201ENST00000362219 110 ntBASIC-1.47□□□□□ -2.64
EFNA3P52797 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.47□□□□□ -2.64
EFNA3P52797 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.47□□□□□ -2.64
EFNA3P52797 RNU6-530P-201ENST00000391180 107 ntBASIC-1.48□□□□□ -2.65
EFNA3P52797 MIR548AM-201ENST00000584298 74 ntBASIC-1.48□□□□□ -2.65
EFNA3P52797 SNORD18C-201ENST00000362704 69 ntBASIC-1.49□□□□□ -2.65
EFNA3P52797 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.49□□□□□ -2.65
EFNA3P52797 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
EFNA3P52797 SNORA17.4-201ENST00000391287 132 ntBASIC-1.5□□□□□ -2.65
EFNA3P52797 MIR4748-201ENST00000578076 82 ntBASIC-1.5□□□□□ -2.65
EFNA3P52797 MIR3123-201ENST00000583417 75 ntBASIC-1.5□□□□□ -2.65
EFNA3P52797 RNU6-361P-201ENST00000364454 107 ntBASIC-1.51□□□□□ -2.65
EFNA3P52797 RNU6-638P-201ENST00000516582 104 ntBASIC-1.52□□□□□ -2.65
EFNA3P52797 RNU6-419P-201ENST00000517030 63 ntBASIC-1.52□□□□□ -2.65
EFNA3P52797 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.52□□□□□ -2.65
EFNA3P52797 RNU6-841P-201ENST00000383872 107 ntBASIC-1.53□□□□□ -2.65
EFNA3P52797 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.53□□□□□ -2.65
EFNA3P52797 MIR548N-201ENST00000408742 75 ntBASIC-1.55□□□□□ -2.66
EFNA3P52797 MIR4426-201ENST00000640330 63 ntBASIC-1.55□□□□□ -2.66
EFNA3P52797 RNA5SP106-201ENST00000517274 100 ntBASIC-1.56□□□□□ -2.66
EFNA3P52797 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.57□□□□□ -2.66
EFNA3P52797 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.58□□□□□ -2.66
EFNA3P52797 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.58□□□□□ -2.66
EFNA3P52797 AC125388.1-201ENST00000459631 156 ntBASIC-1.58□□□□□ -2.66
EFNA3P52797 RNU6-176P-201ENST00000517196 105 ntBASIC-1.58□□□□□ -2.66
EFNA3P52797 RNU6-590P-201ENST00000365039 107 ntBASIC-1.59□□□□□ -2.66
EFNA3P52797 RNU6-300P-201ENST00000459080 104 ntBASIC-1.6□□□□□ -2.67
EFNA3P52797 MIR5693-201ENST00000577722 73 ntBASIC-1.61□□□□□ -2.67
EFNA3P52797 MIR548X-201ENST00000580069 75 ntBASIC-1.61□□□□□ -2.67
EFNA3P52797 MIR581-201ENST00000384895 96 ntBASIC-1.62□□□□□ -2.67
EFNA3P52797 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.63□□□□□ -2.67
EFNA3P52797 MIR379-201ENST00000362218 67 ntBASIC-1.64□□□□□ -2.67
EFNA3P52797 MIR509-1-201ENST00000385265 94 ntBASIC-1.64□□□□□ -2.67
EFNA3P52797 MIR509-2-201ENST00000390724 91 ntBASIC-1.64□□□□□ -2.67
EFNA3P52797 RNU6-141P-201ENST00000410499 105 ntBASIC-1.64□□□□□ -2.67
EFNA3P52797 FTX_4.1-201ENST00000616291 147 ntBASIC-1.64□□□□□ -2.67
EFNA3P52797 RNY4P10-201ENST00000365571 96 ntBASIC-1.65□□□□□ -2.67
EFNA3P52797 RNU6-987P-201ENST00000384759 104 ntBASIC-1.65□□□□□ -2.67
EFNA3P52797 MIR548W-201ENST00000581970 74 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms