Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC097484.2-201ENST00000509147 251 ntBASIC-2.02□□□□□ -2.73
NEK3P51956 FTX_4.1-201ENST00000616291 147 ntBASIC-2.03□□□□□ -2.73
NEK3P51956 MIR202-201ENST00000362219 110 ntBASIC-2.04□□□□□ -2.74
NEK3P51956 RNU6-520P-201ENST00000384717 104 ntBASIC-2.04□□□□□ -2.74
NEK3P51956 MT-TM-201ENST00000387377 68 ntBASIC-2.04□□□□□ -2.74
NEK3P51956 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
NEK3P51956 SNORA25.4-201ENST00000363666 124 ntBASIC-2.05□□□□□ -2.74
NEK3P51956 SNORD78.1-201ENST00000390866 65 ntBASIC-2.05□□□□□ -2.74
NEK3P51956 MIR548N-201ENST00000408742 75 ntBASIC-2.05□□□□□ -2.74
NEK3P51956 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.05□□□□□ -2.74
NEK3P51956 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.06□□□□□ -2.74
NEK3P51956 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.07□□□□□ -2.74
NEK3P51956 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.07□□□□□ -2.74
NEK3P51956 MIR496-201ENST00000385226 102 ntBASIC-2.07□□□□□ -2.74
NEK3P51956 RNU6-649P-201ENST00000384463 107 ntBASIC-2.08□□□□□ -2.74
NEK3P51956 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.08□□□□□ -2.74
NEK3P51956 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.08□□□□□ -2.74
NEK3P51956 SNORD60-201ENST00000383903 83 ntBASIC-2.09□□□□□ -2.74
NEK3P51956 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.09□□□□□ -2.74
NEK3P51956 SNORD113-3-201ENST00000364830 72 ntBASIC-2.1□□□□□ -2.75
NEK3P51956 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.1□□□□□ -2.75
NEK3P51956 SNORD30.1-201ENST00000391309 70 ntBASIC-2.1□□□□□ -2.75
NEK3P51956 RNU6-68P-201ENST00000516576 104 ntBASIC-2.1□□□□□ -2.75
NEK3P51956 RNU7-160P-201ENST00000516660 62 ntBASIC-2.1□□□□□ -2.75
NEK3P51956 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.11□□□□□ -2.75
NEK3P51956 RNU6-141P-201ENST00000410499 105 ntBASIC-2.11□□□□□ -2.75
NEK3P51956 RNU6-810P-201ENST00000364001 107 ntBASIC-2.12□□□□□ -2.75
NEK3P51956 SNORA17.4-201ENST00000391287 132 ntBASIC-2.12□□□□□ -2.75
NEK3P51956 SNORD60.1-201ENST00000362451 73 ntBASIC-2.13□□□□□ -2.75
NEK3P51956 RNU6-912P-201ENST00000363800 104 ntBASIC-2.13□□□□□ -2.75
NEK3P51956 RNU6-361P-201ENST00000364454 107 ntBASIC-2.13□□□□□ -2.75
NEK3P51956 RNU6-828P-201ENST00000364876 107 ntBASIC-2.14□□□□□ -2.75
NEK3P51956 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.14□□□□□ -2.75
NEK3P51956 RNU6-539P-201ENST00000516665 103 ntBASIC-2.14□□□□□ -2.75
NEK3P51956 MIR7110-201ENST00000612638 86 ntBASIC-2.16□□□□□ -2.76
NEK3P51956 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.16□□□□□ -2.76
NEK3P51956 RNY4P9-201ENST00000363194 97 ntBASIC-2.17□□□□□ -2.76
NEK3P51956 RNU6-530P-201ENST00000391180 107 ntBASIC-2.17□□□□□ -2.76
NEK3P51956 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.17□□□□□ -2.76
NEK3P51956 RNU6-231P-201ENST00000517122 103 ntBASIC-2.17□□□□□ -2.76
NEK3P51956 MIR4679-1-201ENST00000637619 75 ntBASIC-2.17□□□□□ -2.76
NEK3P51956 SNORA25.5-201ENST00000363782 126 ntBASIC-2.18□□□□□ -2.76
NEK3P51956 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.18□□□□□ -2.76
NEK3P51956 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.18□□□□□ -2.76
NEK3P51956 MIR4662A-201ENST00000637499 67 ntBASIC-2.18□□□□□ -2.76
NEK3P51956 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.19□□□□□ -2.76
NEK3P51956 SNORD116.2-201ENST00000391251 93 ntBASIC-2.19□□□□□ -2.76
NEK3P51956 AC103706.3-201ENST00000636297 85 ntBASIC-2.19□□□□□ -2.76
NEK3P51956 RNU6-122P-201ENST00000516818 107 ntBASIC-2.2□□□□□ -2.76
NEK3P51956 U6.111-201ENST00000636093 83 ntBASIC-2.2□□□□□ -2.76
NEK3P51956 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.21□□□□□ -2.76
NEK3P51956 RNU6-119P-201ENST00000364882 107 ntBASIC-2.22□□□□□ -2.76
NEK3P51956 MIR4511-201ENST00000582784 87 ntBASIC-2.22□□□□□ -2.76
NEK3P51956 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.23□□□□□ -2.77
NEK3P51956 SNORA40B-201ENST00000385573 128 ntBASIC-2.23□□□□□ -2.77
NEK3P51956 SNORA40.16-201ENST00000517238 121 ntBASIC-2.23□□□□□ -2.77
NEK3P51956 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.24□□□□□ -2.77
NEK3P51956 RNA5SP225-201ENST00000410874 135 ntBASIC-2.24□□□□□ -2.77
NEK3P51956 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.24□□□□□ -2.77
NEK3P51956 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.24□□□□□ -2.77
NEK3P51956 MIR4426-201ENST00000640330 63 ntBASIC-2.24□□□□□ -2.77
NEK3P51956 MIR379-201ENST00000362218 67 ntBASIC-2.25□□□□□ -2.77
NEK3P51956 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.26□□□□□ -2.77
NEK3P51956 MIR1254-1-201ENST00000408257 97 ntBASIC-2.27□□□□□ -2.77
NEK3P51956 RNU6-590P-201ENST00000365039 107 ntBASIC-2.28□□□□□ -2.77
NEK3P51956 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.28□□□□□ -2.77
NEK3P51956 RNU6-776P-201ENST00000364403 104 ntBASIC-2.29□□□□□ -2.78
NEK3P51956 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.29□□□□□ -2.78
NEK3P51956 AL451105.1-201ENST00000450005 189 ntBASIC-2.29□□□□□ -2.78
NEK3P51956 RNU6-300P-201ENST00000459080 104 ntBASIC-2.29□□□□□ -2.78
NEK3P51956 RNU6-940P-201ENST00000363433 104 ntBASIC-2.3□□□□□ -2.78
NEK3P51956 RNU7-119P-201ENST00000459279 63 ntBASIC-2.3□□□□□ -2.78
NEK3P51956 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.3□□□□□ -2.78
NEK3P51956 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.31□□□□□ -2.78
NEK3P51956 RNU6-742P-201ENST00000365289 107 ntBASIC-2.31□□□□□ -2.78
NEK3P51956 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.31□□□□□ -2.78
NEK3P51956 RNA5SP93-201ENST00000362525 114 ntBASIC-2.32□□□□□ -2.78
NEK3P51956 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.33□□□□□ -2.78
NEK3P51956 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.34□□□□□ -2.78
NEK3P51956 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.34□□□□□ -2.78
NEK3P51956 SNORD54-201ENST00000459159 67 ntBASIC-2.34□□□□□ -2.78
NEK3P51956 RNU6-230P-201ENST00000362457 104 ntBASIC-2.35□□□□□ -2.79
NEK3P51956 SNORD45.2-201ENST00000363552 72 ntBASIC-2.35□□□□□ -2.79
NEK3P51956 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.35□□□□□ -2.79
NEK3P51956 RNU6-800P-201ENST00000384473 103 ntBASIC-2.36□□□□□ -2.79
NEK3P51956 RNU6-176P-201ENST00000517196 105 ntBASIC-2.37□□□□□ -2.79
NEK3P51956 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.38□□□□□ -2.79
NEK3P51956 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.39□□□□□ -2.79
NEK3P51956 RNU6-419P-201ENST00000517030 63 ntBASIC-2.39□□□□□ -2.79
NEK3P51956 AL731768.1-201ENST00000603124 139 ntBASIC-2.39□□□□□ -2.79
NEK3P51956 RNU6-345P-201ENST00000517001 107 ntBASIC-2.4□□□□□ -2.79
NEK3P51956 MIR5693-201ENST00000577722 73 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms