Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR3134-201ENST00000579433 74 ntBASIC-6.17□□□□□ -3.4
HMGA1P17096 Y_RNA.216-201ENST00000364205 93 ntBASIC-6.18□□□□□ -3.4
HMGA1P17096 RNU6-687P-201ENST00000516443 89 ntBASIC-6.19□□□□□ -3.4
HMGA1P17096 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-6.2□□□□□ -3.4
HMGA1P17096 RNU6-804P-201ENST00000384286 107 ntBASIC-6.21□□□□□ -3.4
HMGA1P17096 MIR3128-201ENST00000581957 66 ntBASIC-6.21□□□□□ -3.4
HMGA1P17096 SNORA40-201ENST00000388090 126 ntBASIC-6.22□□□□□ -3.41
HMGA1P17096 RNU6-986P-201ENST00000363133 102 ntBASIC-6.23□□□□□ -3.41
HMGA1P17096 Y_RNA.574-201ENST00000384766 95 ntBASIC-6.23□□□□□ -3.41
HMGA1P17096 Y_RNA.607-201ENST00000410597 98 ntBASIC-6.24□□□□□ -3.41
HMGA1P17096 RNU6-663P-201ENST00000391105 106 ntBASIC-6.25□□□□□ -3.41
HMGA1P17096 MIR4795-201ENST00000584182 89 ntBASIC-6.26□□□□□ -3.41
HMGA1P17096 RNY4P19-201ENST00000362530 96 ntBASIC-6.27□□□□□ -3.41
HMGA1P17096 Y_RNA.316-201ENST00000365118 111 ntBASIC-6.27□□□□□ -3.41
HMGA1P17096 MIR2052-201ENST00000636055 55 ntBASIC-6.28□□□□□ -3.41
HMGA1P17096 Y_RNA.297-201ENST00000364950 91 ntBASIC-6.29□□□□□ -3.42
HMGA1P17096 RNU6-394P-201ENST00000410735 107 ntBASIC-6.29□□□□□ -3.42
HMGA1P17096 MALAT1.1-201ENST00000618249 95 ntBASIC-6.29□□□□□ -3.42
HMGA1P17096 Y_RNA.318-201ENST00000365131 97 ntBASIC-6.3□□□□□ -3.42
HMGA1P17096 SNORA25.4-201ENST00000363666 124 ntBASIC-6.31□□□□□ -3.42
HMGA1P17096 Y_RNA.350-201ENST00000365409 98 ntBASIC-6.31□□□□□ -3.42
HMGA1P17096 RNU6-257P-201ENST00000410238 98 ntBASIC-6.32□□□□□ -3.42
HMGA1P17096 SNORA20.1-201ENST00000364790 130 ntBASIC-6.33□□□□□ -3.42
HMGA1P17096 MTND4P29-201ENST00000503122 1372 ntBASIC-6.33□□□□□ -3.42
HMGA1P17096 MIR4712-201ENST00000583750 82 ntBASIC-6.35□□□□□ -3.43
HMGA1P17096 RNU6-1312P-201ENST00000362425 108 ntBASIC-6.36□□□□□ -3.43
HMGA1P17096 RNU4-33P-201ENST00000364316 85 ntBASIC-6.36□□□□□ -3.43
HMGA1P17096 RNU6-675P-201ENST00000384236 104 ntBASIC-6.36□□□□□ -3.43
HMGA1P17096 RNU7-120P-201ENST00000459334 63 ntBASIC-6.36□□□□□ -3.43
HMGA1P17096 Y_RNA.460-201ENST00000384255 102 ntBASIC-6.38□□□□□ -3.43
HMGA1P17096 snoMBII-202.2-201ENST00000517263 86 ntBASIC-6.39□□□□□ -3.43
HMGA1P17096 Y_RNA.73-201ENST00000362910 113 ntBASIC-6.4□□□□□ -3.43
HMGA1P17096 RNU6-1023P-201ENST00000516137 106 ntBASIC-6.4□□□□□ -3.43
HMGA1P17096 MTND5P41-201ENST00000517498 206 ntBASIC-6.4□□□□□ -3.43
HMGA1P17096 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-6.41□□□□□ -3.44
HMGA1P17096 MIR3171-201ENST00000584270 74 ntBASIC-6.42□□□□□ -3.44
HMGA1P17096 MIR4511-201ENST00000582784 87 ntBASIC-6.44□□□□□ -3.44
HMGA1P17096 Y_RNA.619-201ENST00000410951 90 ntBASIC-6.45□□□□□ -3.44
HMGA1P17096 AC134503.1-201ENST00000633048 54 ntBASIC-6.45□□□□□ -3.44
HMGA1P17096 Y_RNA.138-201ENST00000363462 102 ntBASIC-6.47□□□□□ -3.45
HMGA1P17096 Y_RNA.273-201ENST00000364703 102 ntBASIC-6.47□□□□□ -3.45
HMGA1P17096 SNORD30.1-201ENST00000391309 70 ntBASIC-6.47□□□□□ -3.45
HMGA1P17096 RNU6-844P-201ENST00000517175 102 ntBASIC-6.48□□□□□ -3.45
HMGA1P17096 RNU6-634P-201ENST00000459134 106 ntBASIC-6.49□□□□□ -3.45
HMGA1P17096 RNU6-875P-201ENST00000516488 106 ntBASIC-6.49□□□□□ -3.45
HMGA1P17096 RNU6-153P-201ENST00000364422 104 ntBASIC-6.5□□□□□ -3.45
HMGA1P17096 RNU6-209P-201ENST00000384118 107 ntBASIC-6.5□□□□□ -3.45
HMGA1P17096 MIR1245B-201ENST00000636115 69 ntBASIC-6.5□□□□□ -3.45
HMGA1P17096 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.53□□□□□ -3.45
HMGA1P17096 MIR5588-201ENST00000581890 63 ntBASIC-6.54□□□□□ -3.46
HMGA1P17096 AC103706.3-201ENST00000636297 85 ntBASIC-6.54□□□□□ -3.46
HMGA1P17096 Y_RNA.343-201ENST00000365354 112 ntBASIC-6.55□□□□□ -3.46
HMGA1P17096 RNU6-838P-201ENST00000363399 108 ntBASIC-6.56□□□□□ -3.46
HMGA1P17096 RNU6-294P-201ENST00000364999 102 ntBASIC-6.57□□□□□ -3.46
HMGA1P17096 SNORA40.13-201ENST00000516379 120 ntBASIC-6.57□□□□□ -3.46
HMGA1P17096 RNU6-446P-201ENST00000362827 106 ntBASIC-6.58□□□□□ -3.46
HMGA1P17096 IGLL4P-201ENST00000614590 133 ntBASIC-6.58□□□□□ -3.46
HMGA1P17096 MIR450A1-201ENST00000362262 91 ntBASIC-6.59□□□□□ -3.46
HMGA1P17096 MIR548F4-201ENST00000408515 105 ntBASIC-6.59□□□□□ -3.46
HMGA1P17096 RNU6-959P-201ENST00000384671 107 ntBASIC-6.6□□□□□ -3.47
HMGA1P17096 Y_RNA.94-201ENST00000363068 106 ntBASIC-6.61□□□□□ -3.47
HMGA1P17096 MIR488-201ENST00000365739 83 ntBASIC-6.61□□□□□ -3.47
HMGA1P17096 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.63□□□□□ -3.47
HMGA1P17096 AC114801.3-201ENST00000510231 177 ntBASIC-6.63□□□□□ -3.47
HMGA1P17096 AC062037.2-201ENST00000610137 73 ntBASIC-6.63□□□□□ -3.47
HMGA1P17096 Y_RNA.593-201ENST00000410292 98 ntBASIC-6.64□□□□□ -3.47
HMGA1P17096 RNU6-81P-201ENST00000365608 104 ntBASIC-6.65□□□□□ -3.47
HMGA1P17096 Y_RNA.149-201ENST00000363558 117 ntBASIC-6.67□□□□□ -3.48
HMGA1P17096 SNORD113-4-201ENST00000364802 75 ntBASIC-6.67□□□□□ -3.48
HMGA1P17096 Y_RNA.545-201ENST00000384652 105 ntBASIC-6.67□□□□□ -3.48
HMGA1P17096 RNU6-787P-201ENST00000384032 107 ntBASIC-6.68□□□□□ -3.48
HMGA1P17096 AC110620.1-201ENST00000416042 228 ntBASIC-6.68□□□□□ -3.48
HMGA1P17096 AL031737.1-201ENST00000450125 223 ntBASIC-6.68□□□□□ -3.48
HMGA1P17096 MTND5P20-201ENST00000448677 143 ntBASIC-6.69□□□□□ -3.48
HMGA1P17096 SNORD116-14-201ENST00000383894 92 ntBASIC-6.7□□□□□ -3.48
HMGA1P17096 SNORD116-17-201ENST00000383929 92 ntBASIC-6.7□□□□□ -3.48
HMGA1P17096 SNORD116-15-201ENST00000384445 92 ntBASIC-6.7□□□□□ -3.48
HMGA1P17096 SNORD116-19-201ENST00000384729 92 ntBASIC-6.7□□□□□ -3.48
HMGA1P17096 SNORD111B-201ENST00000408587 80 ntBASIC-6.7□□□□□ -3.48
HMGA1P17096 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-6.72□□□□□ -3.49
HMGA1P17096 U6.111-201ENST00000636093 83 ntBASIC-6.72□□□□□ -3.49
HMGA1P17096 MIR4679-1-201ENST00000637619 75 ntBASIC-6.73□□□□□ -3.49
HMGA1P17096 RNU7-171P-201ENST00000459581 62 ntBASIC-6.75□□□□□ -3.49
HMGA1P17096 U7.4-201ENST00000614961 63 ntBASIC-6.76□□□□□ -3.49
HMGA1P17096 RNU6-894P-201ENST00000517094 105 ntBASIC-6.8□□□□□ -3.5
HMGA1P17096 RNU7-200P-201ENST00000516105 62 ntBASIC-6.82□□□□□ -3.5
HMGA1P17096 RNU6-346P-201ENST00000516288 111 ntBASIC-6.82□□□□□ -3.5
HMGA1P17096 MT-TD-201ENST00000387419 68 ntBASIC-6.84□□□□□ -3.5
HMGA1P17096 RNU6-200P-201ENST00000364743 107 ntBASIC-6.85□□□□□ -3.51
HMGA1P17096 RNU6-892P-201ENST00000410335 99 ntBASIC-6.85□□□□□ -3.51
HMGA1P17096 RNU6-623P-201ENST00000363143 105 ntBASIC-6.86□□□□□ -3.51
HMGA1P17096 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-6.86□□□□□ -3.51
HMGA1P17096 RNU6-589P-201ENST00000516485 107 ntBASIC-6.86□□□□□ -3.51
HMGA1P17096 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-6.86□□□□□ -3.51
HMGA1P17096 AL353621.2-201ENST00000605340 133 ntBASIC-6.86□□□□□ -3.51
HMGA1P17096 RNU6-539P-201ENST00000516665 103 ntBASIC-6.87□□□□□ -3.51
HMGA1P17096 RNU6-871P-201ENST00000516122 100 ntBASIC-6.88□□□□□ -3.51
HMGA1P17096 Y_RNA.261-201ENST00000364631 102 ntBASIC-6.9□□□□□ -3.51
HMGA1P17096 RNU6-485P-201ENST00000363475 107 ntBASIC-6.91□□□□□ -3.52
HMGA1P17096 RNU6-640P-201ENST00000363693 105 ntBASIC-6.91□□□□□ -3.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms