Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.94-201ENST00000363068 106 ntBASIC-8.5□□□□□ -3.77
TOP2AP11388 snoMBII-202.2-201ENST00000517263 86 ntBASIC-8.5□□□□□ -3.77
TOP2AP11388 SNORD11.1-201ENST00000459482 85 ntBASIC-8.51□□□□□ -3.77
TOP2AP11388 RNU4-71P-201ENST00000516258 113 ntBASIC-8.51□□□□□ -3.77
TOP2AP11388 SNORD116-18-201ENST00000383961 92 ntBASIC-8.53□□□□□ -3.77
TOP2AP11388 RNU6-539P-201ENST00000516665 103 ntBASIC-8.54□□□□□ -3.78
TOP2AP11388 Y_RNA.554-201ENST00000384672 102 ntBASIC-8.55□□□□□ -3.78
TOP2AP11388 Y_RNA.662-201ENST00000516028 97 ntBASIC-8.56□□□□□ -3.78
TOP2AP11388 RNU6-277P-201ENST00000516272 106 ntBASIC-8.56□□□□□ -3.78
TOP2AP11388 SNORD19B-201ENST00000459623 84 ntBASIC-8.57□□□□□ -3.78
TOP2AP11388 MIR5588-201ENST00000581890 63 ntBASIC-8.58□□□□□ -3.78
TOP2AP11388 IGLL4P-201ENST00000614590 133 ntBASIC-8.59□□□□□ -3.78
TOP2AP11388 Y_RNA.200-201ENST00000364018 102 ntBASIC-8.59□□□□□ -3.79
TOP2AP11388 SNORD111B-201ENST00000408587 80 ntBASIC-8.59□□□□□ -3.79
TOP2AP11388 Y_RNA.20-201ENST00000362479 113 ntBASIC-8.62□□□□□ -3.79
TOP2AP11388 RNU6-426P-201ENST00000516464 97 ntBASIC-8.63□□□□□ -3.79
TOP2AP11388 SNORA40-201ENST00000388090 126 ntBASIC-8.64□□□□□ -3.79
TOP2AP11388 Y_RNA.579-201ENST00000390939 94 ntBASIC-8.64□□□□□ -3.79
TOP2AP11388 RNU6-844P-201ENST00000517175 102 ntBASIC-8.64□□□□□ -3.79
TOP2AP11388 Y_RNA.73-201ENST00000362910 113 ntBASIC-8.64□□□□□ -3.79
TOP2AP11388 MIR3688-2-201ENST00000636963 87 ntBASIC-8.64□□□□□ -3.79
TOP2AP11388 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-8.64□□□□□ -3.79
TOP2AP11388 RNU7-171P-201ENST00000459581 62 ntBASIC-8.66□□□□□ -3.8
TOP2AP11388 RNU6-871P-201ENST00000516122 100 ntBASIC-8.66□□□□□ -3.8
TOP2AP11388 AC044792.1-201ENST00000593294 196 ntBASIC-8.68□□□□□ -3.8
TOP2AP11388 RNU6-394P-201ENST00000410735 107 ntBASIC-8.7□□□□□ -3.8
TOP2AP11388 SNORA40.13-201ENST00000516379 120 ntBASIC-8.7□□□□□ -3.8
TOP2AP11388 MIR4680-201ENST00000580906 66 ntBASIC-8.7□□□□□ -3.8
TOP2AP11388 MIR1302-1-201ENST00000637932 143 ntBASIC-8.72□□□□□ -3.81
TOP2AP11388 Y_RNA.545-201ENST00000384652 105 ntBASIC-8.74□□□□□ -3.81
TOP2AP11388 RNU6-485P-201ENST00000363475 107 ntBASIC-8.79□□□□□ -3.82
TOP2AP11388 AL353621.2-201ENST00000605340 133 ntBASIC-8.8□□□□□ -3.82
TOP2AP11388 AC069439.1-201ENST00000494739 167 ntBASIC-8.8□□□□□ -3.82
TOP2AP11388 RNU6-892P-201ENST00000410335 99 ntBASIC-8.81□□□□□ -3.82
TOP2AP11388 RNU6-257P-201ENST00000410238 98 ntBASIC-8.82□□□□□ -3.82
TOP2AP11388 RNU6-894P-201ENST00000517094 105 ntBASIC-8.85□□□□□ -3.83
TOP2AP11388 Y_RNA.619-201ENST00000410951 90 ntBASIC-8.85□□□□□ -3.83
TOP2AP11388 Y_RNA.593-201ENST00000410292 98 ntBASIC-8.87□□□□□ -3.83
TOP2AP11388 Y_RNA.160-201ENST00000363677 92 ntBASIC-8.89□□□□□ -3.83
TOP2AP11388 RNU6-753P-201ENST00000363926 107 ntBASIC-8.89□□□□□ -3.83
TOP2AP11388 RNU6-829P-201ENST00000363700 112 ntBASIC-8.9□□□□□ -3.83
TOP2AP11388 MIR1277-201ENST00000408536 78 ntBASIC-8.9□□□□□ -3.83
TOP2AP11388 RNU6-111P-201ENST00000517179 105 ntBASIC-8.91□□□□□ -3.84
TOP2AP11388 MIR488-201ENST00000365739 83 ntBASIC-8.92□□□□□ -3.84
TOP2AP11388 RNU6-804P-201ENST00000384286 107 ntBASIC-8.92□□□□□ -3.84
TOP2AP11388 MIR548F3-201ENST00000408509 87 ntBASIC-8.92□□□□□ -3.84
TOP2AP11388 MTND5P20-201ENST00000448677 143 ntBASIC-8.92□□□□□ -3.84
TOP2AP11388 RNU6-930P-201ENST00000390938 100 ntBASIC-8.93□□□□□ -3.84
TOP2AP11388 RNU6-635P-201ENST00000516651 102 ntBASIC-8.93□□□□□ -3.84
TOP2AP11388 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-8.93□□□□□ -3.84
TOP2AP11388 Y_RNA.431-201ENST00000384086 102 ntBASIC-8.94□□□□□ -3.84
TOP2AP11388 RNU7-120P-201ENST00000459334 63 ntBASIC-8.96□□□□□ -3.84
TOP2AP11388 RNU6-463P-201ENST00000384340 107 ntBASIC-8.99□□□□□ -3.85
TOP2AP11388 SNORD42.2-201ENST00000365570 69 ntBASIC-9□□□□□ -3.85
TOP2AP11388 RNU6-985P-201ENST00000410182 104 ntBASIC-9□□□□□ -3.85
TOP2AP11388 RNU6-1137P-201ENST00000517073 99 ntBASIC-9□□□□□ -3.85
TOP2AP11388 RNU6-471P-201ENST00000383944 106 ntBASIC-9□□□□□ -3.85
TOP2AP11388 MIR4666B-201ENST00000578142 81 ntBASIC-9□□□□□ -3.85
TOP2AP11388 RNU2-16P-201ENST00000410712 136 ntBASIC-9.02□□□□□ -3.85
TOP2AP11388 AL031737.1-201ENST00000450125 223 ntBASIC-9.03□□□□□ -3.85
TOP2AP11388 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-9.04□□□□□ -3.86
TOP2AP11388 RNU6-1275P-201ENST00000391087 107 ntBASIC-9.05□□□□□ -3.86
TOP2AP11388 MIR3128-201ENST00000581957 66 ntBASIC-9.06□□□□□ -3.86
TOP2AP11388 U4.5-201ENST00000617137 123 ntBASIC-9.06□□□□□ -3.86
TOP2AP11388 Y_RNA.343-201ENST00000365354 112 ntBASIC-9.07□□□□□ -3.86
TOP2AP11388 RNY3P1-201ENST00000365085 102 ntBASIC-9.08□□□□□ -3.86
TOP2AP11388 MIR450A1-201ENST00000362262 91 ntBASIC-9.09□□□□□ -3.86
TOP2AP11388 Y_RNA.297-201ENST00000364950 91 ntBASIC-9.09□□□□□ -3.86
TOP2AP11388 MT-TL1-201ENST00000386347 75 ntBASIC-9.09□□□□□ -3.86
TOP2AP11388 MIR633-201ENST00000384821 98 ntBASIC-9.1□□□□□ -3.87
TOP2AP11388 RNU6-242P-201ENST00000384359 107 ntBASIC-9.12□□□□□ -3.87
TOP2AP11388 SNORA20.1-201ENST00000364790 130 ntBASIC-9.13□□□□□ -3.87
TOP2AP11388 RNU6-1276P-201ENST00000365372 104 ntBASIC-9.13□□□□□ -3.87
TOP2AP11388 Y_RNA.350-201ENST00000365409 98 ntBASIC-9.15□□□□□ -3.87
TOP2AP11388 RNU6-474P-201ENST00000384243 107 ntBASIC-9.15□□□□□ -3.87
TOP2AP11388 MTND5P41-201ENST00000517498 206 ntBASIC-9.15□□□□□ -3.87
TOP2AP11388 RNU6-584P-201ENST00000410350 95 ntBASIC-9.15□□□□□ -3.87
TOP2AP11388 RNU6-718P-201ENST00000516166 105 ntBASIC-9.15□□□□□ -3.87
TOP2AP11388 MIR620-201ENST00000385232 95 ntBASIC-9.18□□□□□ -3.88
TOP2AP11388 MTND4P29-201ENST00000503122 1372 ntBASIC-9.19□□□□□ -3.88
TOP2AP11388 Y_RNA.460-201ENST00000384255 102 ntBASIC-9.19□□□□□ -3.88
TOP2AP11388 RNU6-1023P-201ENST00000516137 106 ntBASIC-9.19□□□□□ -3.88
TOP2AP11388 Y_RNA.574-201ENST00000384766 95 ntBASIC-9.2□□□□□ -3.88
TOP2AP11388 U6.103-201ENST00000637085 61 ntBASIC-9.2□□□□□ -3.88
TOP2AP11388 Y_RNA.386-201ENST00000383913 105 ntBASIC-9.21□□□□□ -3.88
TOP2AP11388 SNORD116-14-201ENST00000383894 92 ntBASIC-9.24□□□□□ -3.89
TOP2AP11388 SNORD116-17-201ENST00000383929 92 ntBASIC-9.24□□□□□ -3.89
TOP2AP11388 SNORD116-15-201ENST00000384445 92 ntBASIC-9.24□□□□□ -3.89
TOP2AP11388 SNORD116-19-201ENST00000384729 92 ntBASIC-9.24□□□□□ -3.89
TOP2AP11388 RNU6-589P-201ENST00000516485 107 ntBASIC-9.26□□□□□ -3.89
TOP2AP11388 RNU6-640P-201ENST00000363693 105 ntBASIC-9.29□□□□□ -3.9
TOP2AP11388 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-9.31□□□□□ -3.9
TOP2AP11388 MIR548F1-201ENST00000408667 84 ntBASIC-9.32□□□□□ -3.9
TOP2AP11388 MTATP8P1-201ENST00000467115 207 ntBASIC-9.32□□□□□ -3.9
TOP2AP11388 MIR4760-201ENST00000585040 80 ntBASIC-9.37□□□□□ -3.91
TOP2AP11388 RNU6-936P-201ENST00000384005 107 ntBASIC-9.41□□□□□ -3.92
TOP2AP11388 RNU6-200P-201ENST00000364743 107 ntBASIC-9.43□□□□□ -3.92
TOP2AP11388 Y_RNA.216-201ENST00000364205 93 ntBASIC-9.49□□□□□ -3.93
TOP2AP11388 RNU7-200P-201ENST00000516105 62 ntBASIC-9.49□□□□□ -3.93
TOP2AP11388 RNU6-133P-201ENST00000383989 107 ntBASIC-9.5□□□□□ -3.93
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms