Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORA27.2-201ENST00000363365 126 ntBASIC-1.71□□□□□ -2.68
PDGFBP01127 MIR664B-201ENST00000626756 61 ntBASIC-1.71□□□□□ -2.68
PDGFBP01127 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.73□□□□□ -2.69
PDGFBP01127 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.73□□□□□ -2.69
PDGFBP01127 MIR125B1-201ENST00000385236 88 ntBASIC-1.73□□□□□ -2.69
PDGFBP01127 RNU6-400P-201ENST00000391173 106 ntBASIC-1.73□□□□□ -2.69
PDGFBP01127 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
PDGFBP01127 RNY3P8-201ENST00000411366 126 ntBASIC-1.74□□□□□ -2.69
PDGFBP01127 RNU6-122P-201ENST00000516818 107 ntBASIC-1.75□□□□□ -2.69
PDGFBP01127 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.75□□□□□ -2.69
PDGFBP01127 RNA5SP405-201ENST00000363059 114 ntBASIC-1.76□□□□□ -2.69
PDGFBP01127 AC013734.1-201ENST00000619329 111 ntBASIC-1.76□□□□□ -2.69
PDGFBP01127 RNU6-539P-201ENST00000516665 103 ntBASIC-1.77□□□□□ -2.69
PDGFBP01127 RNU6-828P-201ENST00000364876 107 ntBASIC-1.78□□□□□ -2.69
PDGFBP01127 MIR1302-4-201ENST00000408701 150 ntBASIC-1.78□□□□□ -2.69
PDGFBP01127 RNU7-160P-201ENST00000516660 62 ntBASIC-1.78□□□□□ -2.69
PDGFBP01127 MIR4662A-201ENST00000637499 67 ntBASIC-1.78□□□□□ -2.69
PDGFBP01127 RNU6-194P-201ENST00000363862 105 ntBASIC-1.79□□□□□ -2.7
PDGFBP01127 RNU6-776P-201ENST00000364403 104 ntBASIC-1.79□□□□□ -2.7
PDGFBP01127 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.79□□□□□ -2.7
PDGFBP01127 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.79□□□□□ -2.7
PDGFBP01127 MIR4511-201ENST00000582784 87 ntBASIC-1.79□□□□□ -2.7
PDGFBP01127 RNU6-800P-201ENST00000384473 103 ntBASIC-1.8□□□□□ -2.7
PDGFBP01127 RNU6-520P-201ENST00000384717 104 ntBASIC-1.8□□□□□ -2.7
PDGFBP01127 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.81□□□□□ -2.7
PDGFBP01127 SNORA40B-201ENST00000385573 128 ntBASIC-1.81□□□□□ -2.7
PDGFBP01127 MIR466-201ENST00000580653 84 ntBASIC-1.82□□□□□ -2.7
PDGFBP01127 AC103706.3-201ENST00000636297 85 ntBASIC-1.82□□□□□ -2.7
PDGFBP01127 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.82□□□□□ -2.7
PDGFBP01127 RNU6-940P-201ENST00000363433 104 ntBASIC-1.83□□□□□ -2.7
PDGFBP01127 RNU6-695P-201ENST00000391157 104 ntBASIC-1.83□□□□□ -2.7
PDGFBP01127 RNU7-119P-201ENST00000459279 63 ntBASIC-1.83□□□□□ -2.7
PDGFBP01127 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.83□□□□□ -2.7
PDGFBP01127 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.84□□□□□ -2.7
PDGFBP01127 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.85□□□□□ -2.71
PDGFBP01127 SNORA40.16-201ENST00000517238 121 ntBASIC-1.85□□□□□ -2.71
PDGFBP01127 MIR202-201ENST00000362219 110 ntBASIC-1.86□□□□□ -2.71
PDGFBP01127 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.86□□□□□ -2.71
PDGFBP01127 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.88□□□□□ -2.71
PDGFBP01127 RNU6-530P-201ENST00000391180 107 ntBASIC-1.88□□□□□ -2.71
PDGFBP01127 MIR3938-201ENST00000582157 103 ntBASIC-1.88□□□□□ -2.71
PDGFBP01127 RNU6-230P-201ENST00000362457 104 ntBASIC-1.89□□□□□ -2.71
PDGFBP01127 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.91□□□□□ -2.72
PDGFBP01127 MIR3123-201ENST00000583417 75 ntBASIC-1.91□□□□□ -2.72
PDGFBP01127 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.92□□□□□ -2.72
PDGFBP01127 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
PDGFBP01127 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.93□□□□□ -2.72
PDGFBP01127 SNORD60-201ENST00000383903 83 ntBASIC-1.94□□□□□ -2.72
PDGFBP01127 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.94□□□□□ -2.72
PDGFBP01127 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
PDGFBP01127 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.96□□□□□ -2.72
PDGFBP01127 SNORD45.2-201ENST00000363552 72 ntBASIC-1.97□□□□□ -2.72
PDGFBP01127 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.97□□□□□ -2.72
PDGFBP01127 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.98□□□□□ -2.73
PDGFBP01127 SNORA17.4-201ENST00000391287 132 ntBASIC-1.98□□□□□ -2.73
PDGFBP01127 AC110620.1-201ENST00000416042 228 ntBASIC-1.98□□□□□ -2.73
PDGFBP01127 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.99□□□□□ -2.73
PDGFBP01127 Y_RNA.449-201ENST00000384187 102 ntBASIC-2□□□□□ -2.73
PDGFBP01127 AL451105.1-201ENST00000450005 189 ntBASIC-2□□□□□ -2.73
PDGFBP01127 AC114801.3-201ENST00000510231 177 ntBASIC-2.01□□□□□ -2.73
PDGFBP01127 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.02□□□□□ -2.73
PDGFBP01127 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.02□□□□□ -2.73
PDGFBP01127 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.02□□□□□ -2.73
PDGFBP01127 MIR581-201ENST00000384895 96 ntBASIC-2.02□□□□□ -2.73
PDGFBP01127 SNORD18C-201ENST00000362704 69 ntBASIC-2.03□□□□□ -2.73
PDGFBP01127 RNU6-803P-201ENST00000516034 102 ntBASIC-2.03□□□□□ -2.73
PDGFBP01127 MIR4426-201ENST00000640330 63 ntBASIC-2.03□□□□□ -2.73
PDGFBP01127 RNU6-841P-201ENST00000383872 107 ntBASIC-2.04□□□□□ -2.74
PDGFBP01127 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.04□□□□□ -2.74
PDGFBP01127 MIR548AM-201ENST00000584298 74 ntBASIC-2.04□□□□□ -2.74
PDGFBP01127 RNU6-361P-201ENST00000364454 107 ntBASIC-2.06□□□□□ -2.74
PDGFBP01127 MIR548N-201ENST00000408742 75 ntBASIC-2.07□□□□□ -2.74
PDGFBP01127 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.08□□□□□ -2.74
PDGFBP01127 RNU6-471P-201ENST00000383944 106 ntBASIC-2.08□□□□□ -2.74
PDGFBP01127 snoU13.10-201ENST00000459301 103 ntBASIC-2.08□□□□□ -2.74
PDGFBP01127 RNU6-419P-201ENST00000517030 63 ntBASIC-2.08□□□□□ -2.74
PDGFBP01127 RNU6-300P-201ENST00000459080 104 ntBASIC-2.1□□□□□ -2.75
PDGFBP01127 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.1□□□□□ -2.75
PDGFBP01127 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
PDGFBP01127 MIR548W-201ENST00000581970 74 ntBASIC-2.14□□□□□ -2.75
PDGFBP01127 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.14□□□□□ -2.75
PDGFBP01127 RNU6-742P-201ENST00000365289 107 ntBASIC-2.15□□□□□ -2.75
PDGFBP01127 SNORA72.7-201ENST00000516349 94 ntBASIC-2.15□□□□□ -2.75
PDGFBP01127 RNU6-590P-201ENST00000365039 107 ntBASIC-2.17□□□□□ -2.76
PDGFBP01127 RNU6-446P-201ENST00000362827 106 ntBASIC-2.18□□□□□ -2.76
PDGFBP01127 MIR548X-201ENST00000580069 75 ntBASIC-2.19□□□□□ -2.76
PDGFBP01127 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.2□□□□□ -2.76
PDGFBP01127 MIR633-201ENST00000384821 98 ntBASIC-2.2□□□□□ -2.76
PDGFBP01127 RNU6-912P-201ENST00000363800 104 ntBASIC-2.21□□□□□ -2.76
PDGFBP01127 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.21□□□□□ -2.76
PDGFBP01127 MIR4748-201ENST00000578076 82 ntBASIC-2.22□□□□□ -2.76
PDGFBP01127 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.23□□□□□ -2.77
PDGFBP01127 RNU6-176P-201ENST00000517196 105 ntBASIC-2.23□□□□□ -2.77
PDGFBP01127 AC125388.1-201ENST00000459631 156 ntBASIC-2.24□□□□□ -2.77
PDGFBP01127 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.25□□□□□ -2.77
PDGFBP01127 RNU6-638P-201ENST00000516582 104 ntBASIC-2.25□□□□□ -2.77
PDGFBP01127 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.26□□□□□ -2.77
PDGFBP01127 MIR379-201ENST00000362218 67 ntBASIC-2.27□□□□□ -2.77
PDGFBP01127 FTX_4.1-201ENST00000616291 147 ntBASIC-2.27□□□□□ -2.77
PDGFBP01127 SNORD113-4-201ENST00000364802 75 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms