Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC013734.1-201ENST00000619329 111 ntBASIC-0.88□□□□□ -2.55
CDX4O14627 RNU6-530P-201ENST00000391180 107 ntBASIC-0.89□□□□□ -2.55
CDX4O14627 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.89□□□□□ -2.55
CDX4O14627 MIR4306-201ENST00000583390 91 ntBASIC-0.89□□□□□ -2.55
CDX4O14627 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.9□□□□□ -2.55
CDX4O14627 SNORD45.2-201ENST00000363552 72 ntBASIC-0.91□□□□□ -2.56
CDX4O14627 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.91□□□□□ -2.56
CDX4O14627 MIR548X-201ENST00000580069 75 ntBASIC-0.91□□□□□ -2.56
CDX4O14627 RNU6-788P-201ENST00000390967 104 ntBASIC-0.92□□□□□ -2.56
CDX4O14627 AC079150.2-201ENST00000443733 78 ntBASIC-0.92□□□□□ -2.56
CDX4O14627 U6.97-201ENST00000636904 101 ntBASIC-0.92□□□□□ -2.56
CDX4O14627 MIR202-201ENST00000362219 110 ntBASIC-0.93□□□□□ -2.56
CDX4O14627 RNU6-499P-201ENST00000365615 107 ntBASIC-0.93□□□□□ -2.56
CDX4O14627 RNU6-706P-201ENST00000517229 104 ntBASIC-0.94□□□□□ -2.56
CDX4O14627 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.94□□□□□ -2.56
CDX4O14627 RNU6-400P-201ENST00000391173 106 ntBASIC-0.95□□□□□ -2.56
CDX4O14627 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.96□□□□□ -2.56
CDX4O14627 MIR6502-201ENST00000617296 76 ntBASIC-0.96□□□□□ -2.56
CDX4O14627 RNU6-361P-201ENST00000364454 107 ntBASIC-0.97□□□□□ -2.56
CDX4O14627 SNORD60-201ENST00000383903 83 ntBASIC-0.97□□□□□ -2.56
CDX4O14627 SNORA17.4-201ENST00000391287 132 ntBASIC-0.97□□□□□ -2.56
CDX4O14627 HLA-S-202ENST00000425174 53 ntBASIC-0.97□□□□□ -2.56
CDX4O14627 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.98□□□□□ -2.57
CDX4O14627 MIR4520-1-201ENST00000582609 70 ntBASIC-0.99□□□□□ -2.57
CDX4O14627 MIR4426-201ENST00000640330 63 ntBASIC-0.99□□□□□ -2.57
CDX4O14627 RNU6-742P-201ENST00000365289 107 ntBASIC-1□□□□□ -2.57
CDX4O14627 MIR581-201ENST00000384895 96 ntBASIC-1□□□□□ -2.57
CDX4O14627 RNU4-33P-201ENST00000364316 85 ntBASIC-1.01□□□□□ -2.57
CDX4O14627 MIR548N-201ENST00000408742 75 ntBASIC-1.01□□□□□ -2.57
CDX4O14627 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.02□□□□□ -2.57
CDX4O14627 MIR496-201ENST00000385226 102 ntBASIC-1.02□□□□□ -2.57
CDX4O14627 RNU6-695P-201ENST00000391157 104 ntBASIC-1.02□□□□□ -2.57
CDX4O14627 RNU6-980P-201ENST00000516925 103 ntBASIC-1.02□□□□□ -2.57
CDX4O14627 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.03□□□□□ -2.57
CDX4O14627 RNU6-300P-201ENST00000459080 104 ntBASIC-1.04□□□□□ -2.58
CDX4O14627 AC138207.3-201ENST00000585289 166 ntBASIC-1.04□□□□□ -2.58
CDX4O14627 SNORD18C-201ENST00000362704 69 ntBASIC-1.05□□□□□ -2.58
CDX4O14627 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.06□□□□□ -2.58
CDX4O14627 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.06□□□□□ -2.58
CDX4O14627 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.06□□□□□ -2.58
CDX4O14627 MIR5591-201ENST00000578248 65 ntBASIC-1.06□□□□□ -2.58
CDX4O14627 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.07□□□□□ -2.58
CDX4O14627 MIR3123-201ENST00000583417 75 ntBASIC-1.07□□□□□ -2.58
CDX4O14627 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.08□□□□□ -2.58
CDX4O14627 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.08□□□□□ -2.58
CDX4O14627 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.08□□□□□ -2.58
CDX4O14627 RNU6-936P-201ENST00000384005 107 ntBASIC-1.09□□□□□ -2.58
CDX4O14627 RNU6-614P-201ENST00000384369 107 ntBASIC-1.09□□□□□ -2.58
CDX4O14627 U6.59-201ENST00000615686 107 ntBASIC-1.09□□□□□ -2.58
CDX4O14627 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.1□□□□□ -2.59
CDX4O14627 RNU6-983P-201ENST00000516004 103 ntBASIC-1.1□□□□□ -2.59
CDX4O14627 RNU6-176P-201ENST00000517196 105 ntBASIC-1.1□□□□□ -2.59
CDX4O14627 MIR4770-201ENST00000579149 58 ntBASIC-1.1□□□□□ -2.59
CDX4O14627 RNU6-119P-201ENST00000364882 107 ntBASIC-1.11□□□□□ -2.59
CDX4O14627 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.12□□□□□ -2.59
CDX4O14627 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.12□□□□□ -2.59
CDX4O14627 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.13□□□□□ -2.59
CDX4O14627 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.13□□□□□ -2.59
CDX4O14627 RNA5SP86-201ENST00000390869 98 ntBASIC-1.13□□□□□ -2.59
CDX4O14627 MIR548H1-201ENST00000408610 102 ntBASIC-1.13□□□□□ -2.59
CDX4O14627 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.13□□□□□ -2.59
CDX4O14627 RNU6-753P-201ENST00000363926 107 ntBASIC-1.14□□□□□ -2.59
CDX4O14627 MIR487B-201ENST00000385021 84 ntBASIC-1.14□□□□□ -2.59
CDX4O14627 RNU6-68P-201ENST00000516576 104 ntBASIC-1.14□□□□□ -2.59
CDX4O14627 MIR548AL-201ENST00000578416 97 ntBASIC-1.14□□□□□ -2.59
CDX4O14627 RNU6-841P-201ENST00000383872 107 ntBASIC-1.15□□□□□ -2.59
CDX4O14627 RNU6-118P-201ENST00000516552 102 ntBASIC-1.15□□□□□ -2.59
CDX4O14627 RNA5SP93-201ENST00000362525 114 ntBASIC-1.16□□□□□ -2.6
CDX4O14627 RNY4P7-201ENST00000364600 96 ntBASIC-1.16□□□□□ -2.6
CDX4O14627 MTND4LP19-201ENST00000403051 166 ntBASIC-1.16□□□□□ -2.6
CDX4O14627 MIR379-201ENST00000362218 67 ntBASIC-1.17□□□□□ -2.6
CDX4O14627 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.17□□□□□ -2.6
CDX4O14627 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.17□□□□□ -2.6
CDX4O14627 snoU13.10-201ENST00000459301 103 ntBASIC-1.17□□□□□ -2.6
CDX4O14627 MIR548AM-201ENST00000584298 74 ntBASIC-1.17□□□□□ -2.6
CDX4O14627 RNU6-912P-201ENST00000363800 104 ntBASIC-1.18□□□□□ -2.6
CDX4O14627 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.18□□□□□ -2.6
CDX4O14627 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.18□□□□□ -2.6
CDX4O14627 MIR548W-201ENST00000581970 74 ntBASIC-1.18□□□□□ -2.6
CDX4O14627 MIR4317-201ENST00000637586 65 ntBASIC-1.18□□□□□ -2.6
CDX4O14627 RNU6-838P-201ENST00000363399 108 ntBASIC-1.19□□□□□ -2.6
CDX4O14627 RNU6-808P-201ENST00000391233 108 ntBASIC-1.19□□□□□ -2.6
CDX4O14627 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.19□□□□□ -2.6
CDX4O14627 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.19□□□□□ -2.6
CDX4O14627 MIR548H4-201ENST00000408689 111 ntBASIC-1.22□□□□□ -2.6
CDX4O14627 SNORD18.1-201ENST00000363807 70 ntBASIC-1.23□□□□□ -2.61
CDX4O14627 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.23□□□□□ -2.61
CDX4O14627 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.23□□□□□ -2.61
CDX4O14627 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.24□□□□□ -2.61
CDX4O14627 RNU6-930P-201ENST00000390938 100 ntBASIC-1.24□□□□□ -2.61
CDX4O14627 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.25□□□□□ -2.61
CDX4O14627 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.25□□□□□ -2.61
CDX4O14627 RNU4-88P-201ENST00000411220 86 ntBASIC-1.26□□□□□ -2.61
CDX4O14627 SNORD54-201ENST00000459159 67 ntBASIC-1.27□□□□□ -2.61
CDX4O14627 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.28□□□□□ -2.61
CDX4O14627 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.28□□□□□ -2.61
CDX4O14627 RNU6-986P-201ENST00000363133 102 ntBASIC-1.29□□□□□ -2.62
CDX4O14627 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.29□□□□□ -2.62
CDX4O14627 MIR548F3-201ENST00000408509 87 ntBASIC-1.29□□□□□ -2.62
CDX4O14627 AC108019.1-201ENST00000512540 175 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms