Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTND5P20-201ENST00000448677 143 ntBASIC-1.58□□□□□ -2.66
CACNA1AO00555 RNU7-171P-201ENST00000459581 62 ntBASIC-1.58□□□□□ -2.66
CACNA1AO00555 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 MTND5P41-201ENST00000517498 206 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 RNU6-979P-201ENST00000383896 107 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.59□□□□□ -2.66
CACNA1AO00555 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.6□□□□□ -2.66
CACNA1AO00555 RNU7-120P-201ENST00000459334 63 ntBASIC-1.6□□□□□ -2.66
CACNA1AO00555 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.6□□□□□ -2.66
CACNA1AO00555 RNU6-200P-201ENST00000364743 107 ntBASIC-1.6□□□□□ -2.67
CACNA1AO00555 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
CACNA1AO00555 RNU6-122P-201ENST00000516818 107 ntBASIC-1.6□□□□□ -2.67
CACNA1AO00555 U6atac.1-201ENST00000616025 117 ntBASIC-1.6□□□□□ -2.67
CACNA1AO00555 MIR3938-201ENST00000582157 103 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 MALAT1.1-201ENST00000618249 95 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 RNU6-776P-201ENST00000364403 104 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 RNU6-255P-201ENST00000516957 105 ntBASIC-1.61□□□□□ -2.67
CACNA1AO00555 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.61□□□□□ -2.67
CACNA1AO00555 SNORD45C-201ENST00000383893 79 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 RNU6-675P-201ENST00000384236 104 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 AC008737.2-201ENST00000599446 118 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 RNU6-788P-201ENST00000390967 104 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 RNU6-257P-201ENST00000410238 98 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 RNU6-687P-201ENST00000516443 89 ntBASIC-1.62□□□□□ -2.67
CACNA1AO00555 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.62□□□□□ -2.67
CACNA1AO00555 MIR545-201ENST00000385085 106 ntBASIC-1.63□□□□□ -2.67
CACNA1AO00555 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.63□□□□□ -2.67
CACNA1AO00555 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.63□□□□□ -2.67
CACNA1AO00555 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.63□□□□□ -2.67
CACNA1AO00555 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 MIR606-201ENST00000384851 96 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 AL589823.1-201ENST00000429577 183 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 AL117351.2-201ENST00000513571 157 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 MIR5588-201ENST00000581890 63 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 MIR4666B-201ENST00000578142 81 ntBASIC-1.64□□□□□ -2.67
CACNA1AO00555 RNU4-33P-201ENST00000364316 85 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 RNU6-916P-201ENST00000516088 109 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 MIR4511-201ENST00000582784 87 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 RNU6-959P-201ENST00000384671 107 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 MIR568-201ENST00000385036 95 ntBASIC-1.65□□□□□ -2.67
CACNA1AO00555 RNU6-836P-201ENST00000362920 107 ntBASIC-1.66□□□□□ -2.68
CACNA1AO00555 RNU6-379P-201ENST00000363813 104 ntBASIC-1.66□□□□□ -2.68
CACNA1AO00555 MTCYBP9-201ENST00000431021 303 ntBASIC-1.66□□□□□ -2.68
CACNA1AO00555 AL117187.1-201ENST00000555482 181 ntBASIC-1.66□□□□□ -2.68
CACNA1AO00555 RNU6-886P-201ENST00000384319 105 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 RNU7-200P-201ENST00000516105 62 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 MIR548S-201ENST00000581352 82 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 MIR1302-3-201ENST00000408128 138 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 RNU6-589P-201ENST00000516485 107 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 MIR3134-201ENST00000579433 74 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 MIR4679-1-201ENST00000637619 75 ntBASIC-1.67□□□□□ -2.68
CACNA1AO00555 RNU6-209P-201ENST00000384118 107 ntBASIC-1.68□□□□□ -2.68
CACNA1AO00555 RNU6-388P-201ENST00000517012 105 ntBASIC-1.68□□□□□ -2.68
CACNA1AO00555 RNU6-389P-201ENST00000517048 105 ntBASIC-1.68□□□□□ -2.68
CACNA1AO00555 RNU6-634P-201ENST00000459134 106 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 SNORA25.4-201ENST00000363666 124 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 AC044792.1-201ENST00000593294 196 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 IGLL4P-201ENST00000614590 133 ntBASIC-1.69□□□□□ -2.68
CACNA1AO00555 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.7□□□□□ -2.68
CACNA1AO00555 MIR548AL-201ENST00000578416 97 ntBASIC-1.7□□□□□ -2.68
CACNA1AO00555 MIR548AH-201ENST00000637109 76 ntBASIC-1.7□□□□□ -2.68
CACNA1AO00555 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.71□□□□□ -2.68
CACNA1AO00555 MTCYBP6-201ENST00000441810 138 ntBASIC-1.71□□□□□ -2.68
CACNA1AO00555 RNU6-346P-201ENST00000516288 111 ntBASIC-1.71□□□□□ -2.68
CACNA1AO00555 RNA5SP449-201ENST00000516871 130 ntBASIC-1.71□□□□□ -2.68
CACNA1AO00555 AC103706.3-201ENST00000636297 85 ntBASIC-1.71□□□□□ -2.68
CACNA1AO00555 MIR450A1-201ENST00000362262 91 ntBASIC-1.72□□□□□ -2.68
CACNA1AO00555 RNU4-85P-201ENST00000364675 123 ntBASIC-1.72□□□□□ -2.68
CACNA1AO00555 U7.4-201ENST00000614961 63 ntBASIC-1.72□□□□□ -2.68
CACNA1AO00555 MT-TG-201ENST00000387429 68 ntBASIC-1.72□□□□□ -2.69
CACNA1AO00555 MIR4712-201ENST00000583750 82 ntBASIC-1.73□□□□□ -2.69
CACNA1AO00555 RNU6-242P-201ENST00000384359 107 ntBASIC-1.73□□□□□ -2.69
CACNA1AO00555 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.73□□□□□ -2.69
CACNA1AO00555 RNU6-640P-201ENST00000363693 105 ntBASIC-1.74□□□□□ -2.69
CACNA1AO00555 RNU6-539P-201ENST00000516665 103 ntBASIC-1.74□□□□□ -2.69
CACNA1AO00555 RNU6-871P-201ENST00000516122 100 ntBASIC-1.74□□□□□ -2.69
CACNA1AO00555 RNU6-808P-201ENST00000391233 108 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 AC110620.1-201ENST00000416042 228 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 SNORD116-14-201ENST00000383894 92 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 SNORD116-17-201ENST00000383929 92 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 SNORD116-15-201ENST00000384445 92 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 SNORD116-19-201ENST00000384729 92 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 SNORD30.1-201ENST00000391309 70 ntBASIC-1.75□□□□□ -2.69
CACNA1AO00555 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms