Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.95□□□□□ -2.72
USH1CQ9Y6N9 AC008267.6-201ENST00000441664 139 ntBASIC-1.95□□□□□ -2.72
USH1CQ9Y6N9 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.95□□□□□ -2.72
USH1CQ9Y6N9 MIR4484-201ENST00000582855 83 ntBASIC-1.95□□□□□ -2.72
USH1CQ9Y6N9 MALAT1.1-201ENST00000618249 95 ntBASIC-1.95□□□□□ -2.72
USH1CQ9Y6N9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
USH1CQ9Y6N9 RNU6-530P-201ENST00000391180 107 ntBASIC-1.96□□□□□ -2.72
USH1CQ9Y6N9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.96□□□□□ -2.72
USH1CQ9Y6N9 RNU6-834P-201ENST00000362367 110 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 RNY4P9-201ENST00000363194 97 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 RNU6-912P-201ENST00000363800 104 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 RNA5SP173-201ENST00000364857 136 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 SNORD116-24-201ENST00000384549 92 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 AP001318.4-201ENST00000616637 121 ntBASIC-1.97□□□□□ -2.72
USH1CQ9Y6N9 RNU6-361P-201ENST00000364454 107 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 RNU6-675P-201ENST00000384236 104 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 MIR4719-201ENST00000585233 84 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.98□□□□□ -2.73
USH1CQ9Y6N9 RNA5SP93-201ENST00000362525 114 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 SNORD60-201ENST00000383903 83 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 SNORA17.4-201ENST00000391287 132 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 SNORD54-201ENST00000459159 67 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 MIR3133-201ENST00000583157 78 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.99□□□□□ -2.73
USH1CQ9Y6N9 RNU6-1047P-201ENST00000364418 107 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.273-201ENST00000364703 102 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.397-201ENST00000383950 98 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.709-201ENST00000516952 92 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 AL365222.1-201ENST00000614661 98 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 SNX3P1Y-201ENST00000615757 176 ntBASIC-2□□□□□ -2.73
USH1CQ9Y6N9 SNORA63.4-201ENST00000362763 126 ntBASIC-2.01□□□□□ -2.73
USH1CQ9Y6N9 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.01□□□□□ -2.73
USH1CQ9Y6N9 AL031737.1-201ENST00000450125 223 ntBASIC-2.01□□□□□ -2.73
USH1CQ9Y6N9 SNORA40.13-201ENST00000516379 120 ntBASIC-2.01□□□□□ -2.73
USH1CQ9Y6N9 AC006160.2-201ENST00000637708 154 ntBASIC-2.01□□□□□ -2.73
USH1CQ9Y6N9 MIR450A1-201ENST00000362262 91 ntBASIC-2.02□□□□□ -2.73
USH1CQ9Y6N9 RNU6-755P-201ENST00000364400 103 ntBASIC-2.02□□□□□ -2.73
USH1CQ9Y6N9 RNU6-81P-201ENST00000365608 104 ntBASIC-2.02□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.02□□□□□ -2.73
USH1CQ9Y6N9 RNU7-160P-201ENST00000516660 62 ntBASIC-2.02□□□□□ -2.73
USH1CQ9Y6N9 RNU6-810P-201ENST00000364001 107 ntBASIC-2.03□□□□□ -2.73
USH1CQ9Y6N9 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.03□□□□□ -2.73
USH1CQ9Y6N9 RNU6-794P-201ENST00000517261 64 ntBASIC-2.03□□□□□ -2.73
USH1CQ9Y6N9 RNU6-315P-201ENST00000362666 107 ntBASIC-2.04□□□□□ -2.74
USH1CQ9Y6N9 RNU6-380P-201ENST00000410207 107 ntBASIC-2.04□□□□□ -2.74
USH1CQ9Y6N9 RNU6-828P-201ENST00000364876 107 ntBASIC-2.05□□□□□ -2.74
USH1CQ9Y6N9 MIR488-201ENST00000365739 83 ntBASIC-2.05□□□□□ -2.74
USH1CQ9Y6N9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
USH1CQ9Y6N9 RNU6-230P-201ENST00000362457 104 ntBASIC-2.06□□□□□ -2.74
USH1CQ9Y6N9 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.06□□□□□ -2.74
USH1CQ9Y6N9 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.06□□□□□ -2.74
USH1CQ9Y6N9 MIR548AI-201ENST00000579940 88 ntBASIC-2.06□□□□□ -2.74
USH1CQ9Y6N9 SNORD60.1-201ENST00000362451 73 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 MIR1254-1-201ENST00000408257 97 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 RNU6-231P-201ENST00000517122 103 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.07□□□□□ -2.74
USH1CQ9Y6N9 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.08□□□□□ -2.74
USH1CQ9Y6N9 AC090425.1-201ENST00000610007 140 ntBASIC-2.08□□□□□ -2.74
USH1CQ9Y6N9 MIR7110-201ENST00000612638 86 ntBASIC-2.08□□□□□ -2.74
USH1CQ9Y6N9 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.09□□□□□ -2.74
USH1CQ9Y6N9 RNU6-789P-201ENST00000517105 102 ntBASIC-2.09□□□□□ -2.74
USH1CQ9Y6N9 RNU6-844P-201ENST00000517175 102 ntBASIC-2.09□□□□□ -2.74
USH1CQ9Y6N9 MIR5693-201ENST00000577722 73 ntBASIC-2.09□□□□□ -2.74
USH1CQ9Y6N9 MIR379-201ENST00000362218 67 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 RNU6-640P-201ENST00000363693 105 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 SNORA40.16-201ENST00000517238 121 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 RNU6-92P-201ENST00000605893 104 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 MIR4426-201ENST00000640330 63 ntBASIC-2.1□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.11□□□□□ -2.75
USH1CQ9Y6N9 AL731768.1-201ENST00000603124 139 ntBASIC-2.11□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.12□□□□□ -2.75
USH1CQ9Y6N9 SNORA40B-201ENST00000385573 128 ntBASIC-2.12□□□□□ -2.75
USH1CQ9Y6N9 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.12□□□□□ -2.75
USH1CQ9Y6N9 RNU6-590P-201ENST00000365039 107 ntBASIC-2.13□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.13□□□□□ -2.75
USH1CQ9Y6N9 RNU6-22P-201ENST00000384355 107 ntBASIC-2.13□□□□□ -2.75
USH1CQ9Y6N9 SNORD116.2-201ENST00000391251 93 ntBASIC-2.13□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.13□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.14□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.14□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.14□□□□□ -2.75
USH1CQ9Y6N9 RNU6-742P-201ENST00000365289 107 ntBASIC-2.14□□□□□ -2.75
USH1CQ9Y6N9 RNU6-209P-201ENST00000384118 107 ntBASIC-2.14□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.15□□□□□ -2.75
USH1CQ9Y6N9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.15□□□□□ -2.75
USH1CQ9Y6N9 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.16□□□□□ -2.76
USH1CQ9Y6N9 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.16□□□□□ -2.76
USH1CQ9Y6N9 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.16□□□□□ -2.76
USH1CQ9Y6N9 AL451105.1-201ENST00000450005 189 ntBASIC-2.16□□□□□ -2.76
USH1CQ9Y6N9 RNU6-300P-201ENST00000459080 104 ntBASIC-2.16□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms