Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR6818-201ENST00000621576 65 ntBASIC-0.97□□□□□ -2.56
SIX4Q9UIU6 RNU6-30P-201ENST00000384561 107 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 MIR29B1-201ENST00000385015 81 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 MIR125B1-201ENST00000385236 88 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 SNORD83B-201ENST00000386745 93 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 MIR3938-201ENST00000582157 103 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.98□□□□□ -2.57
SIX4Q9UIU6 RNA5SP476-201ENST00000516613 103 ntBASIC-0.99□□□□□ -2.57
SIX4Q9UIU6 uc_338.19-201ENST00000616808 99 ntBASIC-0.99□□□□□ -2.57
SIX4Q9UIU6 RNU6-590P-201ENST00000365039 107 ntBASIC-1□□□□□ -2.57
SIX4Q9UIU6 RNU6-258P-201ENST00000390884 101 ntBASIC-1□□□□□ -2.57
SIX4Q9UIU6 RNU7-119P-201ENST00000459279 63 ntBASIC-1□□□□□ -2.57
SIX4Q9UIU6 MIR4499-201ENST00000584834 69 ntBASIC-1□□□□□ -2.57
SIX4Q9UIU6 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.01□□□□□ -2.57
SIX4Q9UIU6 SNORA40B-201ENST00000385573 128 ntBASIC-1.01□□□□□ -2.57
SIX4Q9UIU6 SNORD63.2-201ENST00000516303 64 ntBASIC-1.01□□□□□ -2.57
SIX4Q9UIU6 RNU7-160P-201ENST00000516660 62 ntBASIC-1.01□□□□□ -2.57
SIX4Q9UIU6 SNORA40.16-201ENST00000517238 121 ntBASIC-1.01□□□□□ -2.57
SIX4Q9UIU6 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.02□□□□□ -2.57
SIX4Q9UIU6 AC090616.4-201ENST00000448026 115 ntBASIC-1.02□□□□□ -2.57
SIX4Q9UIU6 RNU7-134P-201ENST00000458997 64 ntBASIC-1.02□□□□□ -2.57
SIX4Q9UIU6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
SIX4Q9UIU6 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.04□□□□□ -2.58
SIX4Q9UIU6 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.04□□□□□ -2.58
SIX4Q9UIU6 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.05□□□□□ -2.58
SIX4Q9UIU6 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.05□□□□□ -2.58
SIX4Q9UIU6 HAR1A.1-201ENST00000459583 118 ntBASIC-1.05□□□□□ -2.58
SIX4Q9UIU6 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.05□□□□□ -2.58
SIX4Q9UIU6 RNU6-974P-201ENST00000384099 108 ntBASIC-1.06□□□□□ -2.58
SIX4Q9UIU6 RNU6-520P-201ENST00000384717 104 ntBASIC-1.06□□□□□ -2.58
SIX4Q9UIU6 AC125388.1-201ENST00000459631 156 ntBASIC-1.06□□□□□ -2.58
SIX4Q9UIU6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.07□□□□□ -2.58
SIX4Q9UIU6 RNU6-828P-201ENST00000364876 107 ntBASIC-1.08□□□□□ -2.58
SIX4Q9UIU6 AC139453.2-201ENST00000487255 133 ntBASIC-1.08□□□□□ -2.58
SIX4Q9UIU6 RNY1P9-201ENST00000532431 109 ntBASIC-1.08□□□□□ -2.58
SIX4Q9UIU6 RNU6-164P-201ENST00000364604 103 ntBASIC-1.1□□□□□ -2.59
SIX4Q9UIU6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.1□□□□□ -2.59
SIX4Q9UIU6 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.1□□□□□ -2.59
SIX4Q9UIU6 RNA5SP67-201ENST00000516422 131 ntBASIC-1.1□□□□□ -2.59
SIX4Q9UIU6 MIR6738-201ENST00000619620 64 ntBASIC-1.11□□□□□ -2.59
SIX4Q9UIU6 SNORA27.2-201ENST00000363365 126 ntBASIC-1.12□□□□□ -2.59
SIX4Q9UIU6 MIR4324-201ENST00000584846 72 ntBASIC-1.12□□□□□ -2.59
SIX4Q9UIU6 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.13□□□□□ -2.59
SIX4Q9UIU6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
SIX4Q9UIU6 MIR1468-201ENST00000410600 86 ntBASIC-1.14□□□□□ -2.59
SIX4Q9UIU6 RNU6-446P-201ENST00000362827 106 ntBASIC-1.15□□□□□ -2.59
SIX4Q9UIU6 MIR633-201ENST00000384821 98 ntBASIC-1.16□□□□□ -2.6
SIX4Q9UIU6 AC018880.2-201ENST00000414265 201 ntBASIC-1.16□□□□□ -2.6
SIX4Q9UIU6 MIR23C-201ENST00000579846 100 ntBASIC-1.16□□□□□ -2.6
SIX4Q9UIU6 AC091912.2-201ENST00000624798 167 ntBASIC-1.17□□□□□ -2.6
SIX4Q9UIU6 MIR6874-201ENST00000635894 71 ntBASIC-1.17□□□□□ -2.6
SIX4Q9UIU6 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
SIX4Q9UIU6 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
SIX4Q9UIU6 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.19□□□□□ -2.6
SIX4Q9UIU6 MIR587-201ENST00000384845 96 ntBASIC-1.2□□□□□ -2.6
SIX4Q9UIU6 RNY3P8-201ENST00000411366 126 ntBASIC-1.2□□□□□ -2.6
SIX4Q9UIU6 AC120024.2-201ENST00000576526 175 ntBASIC-1.2□□□□□ -2.6
SIX4Q9UIU6 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.21□□□□□ -2.6
SIX4Q9UIU6 RNU6-829P-201ENST00000363700 112 ntBASIC-1.21□□□□□ -2.6
SIX4Q9UIU6 RNU6-563P-201ENST00000364872 108 ntBASIC-1.21□□□□□ -2.6
SIX4Q9UIU6 MIR409-201ENST00000362237 79 ntBASIC-1.22□□□□□ -2.6
SIX4Q9UIU6 AL451105.1-201ENST00000450005 189 ntBASIC-1.23□□□□□ -2.61
SIX4Q9UIU6 RNU6-79P-201ENST00000362511 107 ntBASIC-1.24□□□□□ -2.61
SIX4Q9UIU6 RNU6-419P-201ENST00000517030 63 ntBASIC-1.24□□□□□ -2.61
SIX4Q9UIU6 SNORD113-4-201ENST00000364802 75 ntBASIC-1.25□□□□□ -2.61
SIX4Q9UIU6 MIR8485-201ENST00000401372 91 ntBASIC-1.25□□□□□ -2.61
SIX4Q9UIU6 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
SIX4Q9UIU6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.26□□□□□ -2.61
SIX4Q9UIU6 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.26□□□□□ -2.61
SIX4Q9UIU6 MIR4306-201ENST00000583390 91 ntBASIC-1.26□□□□□ -2.61
SIX4Q9UIU6 AC079150.2-201ENST00000443733 78 ntBASIC-1.27□□□□□ -2.61
SIX4Q9UIU6 AC013734.1-201ENST00000619329 111 ntBASIC-1.27□□□□□ -2.61
SIX4Q9UIU6 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.28□□□□□ -2.61
SIX4Q9UIU6 RNU6-530P-201ENST00000391180 107 ntBASIC-1.28□□□□□ -2.61
SIX4Q9UIU6 RNU6-788P-201ENST00000390967 104 ntBASIC-1.29□□□□□ -2.62
SIX4Q9UIU6 MIR3165-201ENST00000579874 75 ntBASIC-1.29□□□□□ -2.62
SIX4Q9UIU6 SNORD45.2-201ENST00000363552 72 ntBASIC-1.3□□□□□ -2.62
SIX4Q9UIU6 MIR548X-201ENST00000580069 75 ntBASIC-1.3□□□□□ -2.62
SIX4Q9UIU6 MIR202-201ENST00000362219 110 ntBASIC-1.31□□□□□ -2.62
SIX4Q9UIU6 RNA5SP266-201ENST00000410273 108 ntBASIC-1.31□□□□□ -2.62
SIX4Q9UIU6 RNU6-499P-201ENST00000365615 107 ntBASIC-1.32□□□□□ -2.62
SIX4Q9UIU6 RNU6-400P-201ENST00000391173 106 ntBASIC-1.32□□□□□ -2.62
SIX4Q9UIU6 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.32□□□□□ -2.62
SIX4Q9UIU6 U6.97-201ENST00000636904 101 ntBASIC-1.34□□□□□ -2.62
SIX4Q9UIU6 MIR4320-201ENST00000636981 65 ntBASIC-1.35□□□□□ -2.63
SIX4Q9UIU6 MIR6502-201ENST00000617296 76 ntBASIC-1.36□□□□□ -2.63
SIX4Q9UIU6 RNU6-361P-201ENST00000364454 107 ntBASIC-1.37□□□□□ -2.63
SIX4Q9UIU6 MIR4426-201ENST00000640330 63 ntBASIC-1.38□□□□□ -2.63
SIX4Q9UIU6 SNORD60-201ENST00000383903 83 ntBASIC-1.39□□□□□ -2.63
SIX4Q9UIU6 SNORA17.4-201ENST00000391287 132 ntBASIC-1.39□□□□□ -2.63
SIX4Q9UIU6 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.4□□□□□ -2.63
SIX4Q9UIU6 RNU6-706P-201ENST00000517229 104 ntBASIC-1.4□□□□□ -2.63
SIX4Q9UIU6 MIR548N-201ENST00000408742 75 ntBASIC-1.42□□□□□ -2.64
SIX4Q9UIU6 MIR4520-1-201ENST00000582609 70 ntBASIC-1.42□□□□□ -2.64
SIX4Q9UIU6 RNU6-742P-201ENST00000365289 107 ntBASIC-1.43□□□□□ -2.64
SIX4Q9UIU6 MIR581-201ENST00000384895 96 ntBASIC-1.43□□□□□ -2.64
SIX4Q9UIU6 RNU6-695P-201ENST00000391157 104 ntBASIC-1.43□□□□□ -2.64
SIX4Q9UIU6 RNU6-980P-201ENST00000516925 103 ntBASIC-1.43□□□□□ -2.64
SIX4Q9UIU6 RNU4-33P-201ENST00000364316 85 ntBASIC-1.44□□□□□ -2.64
SIX4Q9UIU6 RNA5SP331-201ENST00000364986 107 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms