Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNY3P8-201ENST00000411366 126 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 MIR4756-201ENST00000577874 78 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 MIR1245B-201ENST00000636115 69 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 SNORA27.2-201ENST00000363365 126 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNU6-940P-201ENST00000363433 104 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNU6-649P-201ENST00000384463 107 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNU6-523P-201ENST00000516304 54 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 MIR4666B-201ENST00000578142 81 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 MIR5588-201ENST00000581890 63 ntBASIC-1.08□□□□□ -2.58
CCDC88CQ9P219 RNU6-841P-201ENST00000383872 107 ntBASIC-1.09□□□□□ -2.58
CCDC88CQ9P219 AC108019.1-201ENST00000512540 175 ntBASIC-1.09□□□□□ -2.58
CCDC88CQ9P219 RNU6-92P-201ENST00000605893 104 ntBASIC-1.09□□□□□ -2.58
CCDC88CQ9P219 RNU6-294P-201ENST00000364999 102 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 SNORD60-201ENST00000383903 83 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 MIR581-201ENST00000384895 96 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 RNA5SP86-201ENST00000390869 98 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 RNU6-995P-201ENST00000391244 107 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 SNORD63.2-201ENST00000516303 64 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 IGLL4P-201ENST00000614590 133 ntBASIC-1.1□□□□□ -2.58
CCDC88CQ9P219 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 RNU6-32P-201ENST00000383948 107 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 RNU6-13P-201ENST00000384248 107 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 RNU6-12P-201ENST00000384604 107 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 RNU6-41P-201ENST00000384741 107 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 MIR3668-201ENST00000582138 75 ntBASIC-1.1□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 MIR548AI-201ENST00000579940 88 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 SNORD18C-201ENST00000362704 69 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 RNU6-663P-201ENST00000391105 106 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 RNU6-983P-201ENST00000516004 103 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 MIR664B-201ENST00000626756 61 ntBASIC-1.11□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.12□□□□□ -2.59
CCDC88CQ9P219 MIR125B1-201ENST00000385236 88 ntBASIC-1.12□□□□□ -2.59
CCDC88CQ9P219 MIR548N-201ENST00000408742 75 ntBASIC-1.12□□□□□ -2.59
CCDC88CQ9P219 RNU6-380P-201ENST00000410207 107 ntBASIC-1.12□□□□□ -2.59
CCDC88CQ9P219 MIR379-201ENST00000362218 67 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 RNU6-810P-201ENST00000364001 107 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 RNA5SP173-201ENST00000364857 136 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 SNORD116.2-201ENST00000391251 93 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 RNU6-172P-201ENST00000411000 93 ntBASIC-1.13□□□□□ -2.59
CCDC88CQ9P219 RNU6-912P-201ENST00000363800 104 ntBASIC-1.14□□□□□ -2.59
CCDC88CQ9P219 RNU6-361P-201ENST00000364454 107 ntBASIC-1.14□□□□□ -2.59
CCDC88CQ9P219 RNU4-88P-201ENST00000411220 86 ntBASIC-1.14□□□□□ -2.59
CCDC88CQ9P219 MIR3134-201ENST00000579433 74 ntBASIC-1.14□□□□□ -2.59
CCDC88CQ9P219 U7.4-201ENST00000614961 63 ntBASIC-1.14□□□□□ -2.59
CCDC88CQ9P219 SNORD18.1-201ENST00000363807 70 ntBASIC-1.15□□□□□ -2.59
CCDC88CQ9P219 RNY4P7-201ENST00000364600 96 ntBASIC-1.15□□□□□ -2.59
CCDC88CQ9P219 SNORD113-1-201ENST00000365321 69 ntBASIC-1.15□□□□□ -2.59
CCDC88CQ9P219 RNU6-411P-201ENST00000384451 107 ntBASIC-1.15□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.15□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.16□□□□□ -2.59
CCDC88CQ9P219 RNU6-215P-201ENST00000365169 102 ntBASIC-1.16□□□□□ -2.59
CCDC88CQ9P219 RNU6-313P-201ENST00000516317 112 ntBASIC-1.16□□□□□ -2.59
CCDC88CQ9P219 MIR4712-201ENST00000583750 82 ntBASIC-1.16□□□□□ -2.59
CCDC88CQ9P219 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.16□□□□□ -2.6
CCDC88CQ9P219 RNU6-820P-201ENST00000384273 107 ntBASIC-1.16□□□□□ -2.6
CCDC88CQ9P219 MIR3938-201ENST00000582157 103 ntBASIC-1.16□□□□□ -2.6
CCDC88CQ9P219 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.16□□□□□ -2.6
CCDC88CQ9P219 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.17□□□□□ -2.6
CCDC88CQ9P219 RNU6-687P-201ENST00000516443 89 ntBASIC-1.17□□□□□ -2.6
CCDC88CQ9P219 MIR5582-201ENST00000579697 68 ntBASIC-1.17□□□□□ -2.6
CCDC88CQ9P219 SNORA40B-201ENST00000385573 128 ntBASIC-1.18□□□□□ -2.6
CCDC88CQ9P219 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
CCDC88CQ9P219 MIR494-201ENST00000349529 81 ntBASIC-1.18□□□□□ -2.6
CCDC88CQ9P219 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.18□□□□□ -2.6
CCDC88CQ9P219 RNA5SP93-201ENST00000362525 114 ntBASIC-1.19□□□□□ -2.6
CCDC88CQ9P219 RNU6-980P-201ENST00000516925 103 ntBASIC-1.19□□□□□ -2.6
CCDC88CQ9P219 MIR7110-201ENST00000612638 86 ntBASIC-1.19□□□□□ -2.6
CCDC88CQ9P219 MIR202-201ENST00000362219 110 ntBASIC-1.2□□□□□ -2.6
CCDC88CQ9P219 RNU6-895P-201ENST00000384125 103 ntBASIC-1.2□□□□□ -2.6
CCDC88CQ9P219 SNORA40.16-201ENST00000517238 121 ntBASIC-1.2□□□□□ -2.6
CCDC88CQ9P219 RNU6-153P-201ENST00000364422 104 ntBASIC-1.21□□□□□ -2.6
CCDC88CQ9P219 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.21□□□□□ -2.6
CCDC88CQ9P219 RNU7-160P-201ENST00000516660 62 ntBASIC-1.21□□□□□ -2.6
CCDC88CQ9P219 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.22□□□□□ -2.6
CCDC88CQ9P219 RNU6-520P-201ENST00000384717 104 ntBASIC-1.22□□□□□ -2.6
CCDC88CQ9P219 RNU6-68P-201ENST00000516576 104 ntBASIC-1.22□□□□□ -2.6
CCDC88CQ9P219 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.22□□□□□ -2.6
CCDC88CQ9P219 AC062037.1-201ENST00000605302 128 ntBASIC-1.22□□□□□ -2.6
CCDC88CQ9P219 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 SNORA17.4-201ENST00000391287 132 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 RNU6-634P-201ENST00000459134 106 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 RNA5SP405-201ENST00000363059 114 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 RNU6-406P-201ENST00000516470 107 ntBASIC-1.23□□□□□ -2.61
CCDC88CQ9P219 SNORD45.2-201ENST00000363552 72 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms