Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RPL35AP4-201ENST00000412007 102 ntBASIC-1.38□□□□□ -2.63
DDX56Q9NY93 RNA5SP461-201ENST00000516451 104 ntBASIC-1.38□□□□□ -2.63
DDX56Q9NY93 MIR4306-201ENST00000583390 91 ntBASIC-1.38□□□□□ -2.63
DDX56Q9NY93 AC103706.3-201ENST00000636297 85 ntBASIC-1.39□□□□□ -2.63
DDX56Q9NY93 RNU7-151P-201ENST00000516930 53 ntBASIC-1.4□□□□□ -2.63
DDX56Q9NY93 MIR6818-201ENST00000621576 65 ntBASIC-1.4□□□□□ -2.63
DDX56Q9NY93 MIR579-201ENST00000385221 98 ntBASIC-1.41□□□□□ -2.64
DDX56Q9NY93 MIR3170-201ENST00000582699 77 ntBASIC-1.41□□□□□ -2.64
DDX56Q9NY93 MIR520D-201ENST00000385002 87 ntBASIC-1.42□□□□□ -2.64
DDX56Q9NY93 MIR29B1-201ENST00000385015 81 ntBASIC-1.42□□□□□ -2.64
DDX56Q9NY93 RNU6-995P-201ENST00000391244 107 ntBASIC-1.42□□□□□ -2.64
DDX56Q9NY93 SNX3P1X-201ENST00000414887 175 ntBASIC-1.42□□□□□ -2.64
DDX56Q9NY93 RNU6-122P-201ENST00000516818 107 ntBASIC-1.42□□□□□ -2.64
DDX56Q9NY93 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.43□□□□□ -2.64
DDX56Q9NY93 RNU6-638P-201ENST00000516582 104 ntBASIC-1.43□□□□□ -2.64
DDX56Q9NY93 RNU7-134P-201ENST00000458997 64 ntBASIC-1.45□□□□□ -2.64
DDX56Q9NY93 AC114801.3-201ENST00000510231 177 ntBASIC-1.45□□□□□ -2.64
DDX56Q9NY93 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
DDX56Q9NY93 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.46□□□□□ -2.64
DDX56Q9NY93 RNU6-608P-201ENST00000383927 104 ntBASIC-1.47□□□□□ -2.64
DDX56Q9NY93 AC090616.4-201ENST00000448026 115 ntBASIC-1.47□□□□□ -2.64
DDX56Q9NY93 RNU6-706P-201ENST00000517229 104 ntBASIC-1.47□□□□□ -2.64
DDX56Q9NY93 MIR7110-201ENST00000612638 86 ntBASIC-1.47□□□□□ -2.64
DDX56Q9NY93 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.47□□□□□ -2.64
DDX56Q9NY93 RNU6-231P-201ENST00000517122 103 ntBASIC-1.48□□□□□ -2.65
DDX56Q9NY93 MIR7978-201ENST00000636158 59 ntBASIC-1.48□□□□□ -2.65
DDX56Q9NY93 RNU6-247P-201ENST00000362636 107 ntBASIC-1.49□□□□□ -2.65
DDX56Q9NY93 RNU6-940P-201ENST00000363433 104 ntBASIC-1.5□□□□□ -2.65
DDX56Q9NY93 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.5□□□□□ -2.65
DDX56Q9NY93 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.5□□□□□ -2.65
DDX56Q9NY93 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.51□□□□□ -2.65
DDX56Q9NY93 SNORD116.2-201ENST00000391251 93 ntBASIC-1.51□□□□□ -2.65
DDX56Q9NY93 RNA5SP180-201ENST00000516181 101 ntBASIC-1.53□□□□□ -2.65
DDX56Q9NY93 RNU6-576P-201ENST00000390854 102 ntBASIC-1.54□□□□□ -2.66
DDX56Q9NY93 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.55□□□□□ -2.66
DDX56Q9NY93 RNU6-810P-201ENST00000364001 107 ntBASIC-1.55□□□□□ -2.66
DDX56Q9NY93 MIR466-201ENST00000580653 84 ntBASIC-1.55□□□□□ -2.66
DDX56Q9NY93 MIR198-201ENST00000637333 62 ntBASIC-1.55□□□□□ -2.66
DDX56Q9NY93 RNU6-164P-201ENST00000364604 103 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 RNU6-669P-201ENST00000365575 107 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 MIR125B1-201ENST00000385236 88 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 MIR601-201ENST00000385256 79 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 RNU6-258P-201ENST00000390884 101 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 AC110620.1-201ENST00000416042 228 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.56□□□□□ -2.66
DDX56Q9NY93 RNU6-471P-201ENST00000383944 106 ntBASIC-1.57□□□□□ -2.66
DDX56Q9NY93 SNORD63.2-201ENST00000516303 64 ntBASIC-1.57□□□□□ -2.66
DDX56Q9NY93 RNU7-160P-201ENST00000516660 62 ntBASIC-1.57□□□□□ -2.66
DDX56Q9NY93 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.57□□□□□ -2.66
DDX56Q9NY93 MIR8485-201ENST00000401372 91 ntBASIC-1.58□□□□□ -2.66
DDX56Q9NY93 MIR1468-201ENST00000410600 86 ntBASIC-1.58□□□□□ -2.66
DDX56Q9NY93 HLA-S-202ENST00000425174 53 ntBASIC-1.58□□□□□ -2.66
DDX56Q9NY93 AC138207.3-201ENST00000585289 166 ntBASIC-1.58□□□□□ -2.66
DDX56Q9NY93 MIR1285-2-201ENST00000408311 88 ntBASIC-1.59□□□□□ -2.66
DDX56Q9NY93 MIR3938-201ENST00000582157 103 ntBASIC-1.59□□□□□ -2.66
DDX56Q9NY93 RNU7-119P-201ENST00000459279 63 ntBASIC-1.6□□□□□ -2.67
DDX56Q9NY93 RNU6-226P-201ENST00000363778 107 ntBASIC-1.61□□□□□ -2.67
DDX56Q9NY93 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.62□□□□□ -2.67
DDX56Q9NY93 MIR1246-201ENST00000636535 73 ntBASIC-1.62□□□□□ -2.67
DDX56Q9NY93 RNU6-974P-201ENST00000384099 108 ntBASIC-1.64□□□□□ -2.67
DDX56Q9NY93 SNORA40B-201ENST00000385573 128 ntBASIC-1.64□□□□□ -2.67
DDX56Q9NY93 MIR365A-201ENST00000362260 87 ntBASIC-1.65□□□□□ -2.67
DDX56Q9NY93 AC018880.2-201ENST00000414265 201 ntBASIC-1.65□□□□□ -2.67
DDX56Q9NY93 MIR23C-201ENST00000579846 100 ntBASIC-1.65□□□□□ -2.67
DDX56Q9NY93 AC091912.2-201ENST00000624798 167 ntBASIC-1.65□□□□□ -2.67
DDX56Q9NY93 SNORA27.2-201ENST00000363365 126 ntBASIC-1.66□□□□□ -2.68
DDX56Q9NY93 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.66□□□□□ -2.68
DDX56Q9NY93 SNORA40.16-201ENST00000517238 121 ntBASIC-1.66□□□□□ -2.68
DDX56Q9NY93 MIR4441-201ENST00000582623 100 ntBASIC-1.67□□□□□ -2.68
DDX56Q9NY93 RNU6-828P-201ENST00000364876 107 ntBASIC-1.68□□□□□ -2.68
DDX56Q9NY93 MIR6874-201ENST00000635894 71 ntBASIC-1.68□□□□□ -2.68
DDX56Q9NY93 MIR5591-201ENST00000578248 65 ntBASIC-1.69□□□□□ -2.68
DDX56Q9NY93 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.7□□□□□ -2.68
DDX56Q9NY93 RNU6-520P-201ENST00000384717 104 ntBASIC-1.7□□□□□ -2.68
DDX56Q9NY93 MIR6502-201ENST00000617296 76 ntBASIC-1.7□□□□□ -2.68
DDX56Q9NY93 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.71□□□□□ -2.68
DDX56Q9NY93 U4.2-201ENST00000618561 85 ntBASIC-1.72□□□□□ -2.68
DDX56Q9NY93 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.74□□□□□ -2.69
DDX56Q9NY93 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.75□□□□□ -2.69
DDX56Q9NY93 AC120024.2-201ENST00000576526 175 ntBASIC-1.75□□□□□ -2.69
DDX56Q9NY93 MIR4520-1-201ENST00000582609 70 ntBASIC-1.76□□□□□ -2.69
DDX56Q9NY93 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.77□□□□□ -2.69
DDX56Q9NY93 MIR4770-201ENST00000579149 58 ntBASIC-1.77□□□□□ -2.69
DDX56Q9NY93 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.77□□□□□ -2.69
DDX56Q9NY93 RNU6-79P-201ENST00000362511 107 ntBASIC-1.78□□□□□ -2.69
DDX56Q9NY93 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.78□□□□□ -2.69
DDX56Q9NY93 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.79□□□□□ -2.7
DDX56Q9NY93 RNU6-590P-201ENST00000365039 107 ntBASIC-1.79□□□□□ -2.7
DDX56Q9NY93 MIR4723-201ENST00000585070 81 ntBASIC-1.79□□□□□ -2.7
DDX56Q9NY93 RNU6-563P-201ENST00000364872 108 ntBASIC-1.81□□□□□ -2.7
DDX56Q9NY93 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
DDX56Q9NY93 AC125388.1-201ENST00000459631 156 ntBASIC-1.82□□□□□ -2.7
DDX56Q9NY93 SNORD114-3-201ENST00000364969 75 ntBASIC-1.83□□□□□ -2.7
DDX56Q9NY93 RNY3P8-201ENST00000411366 126 ntBASIC-1.83□□□□□ -2.7
DDX56Q9NY93 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms