Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.92□□□□□ -3.2
SCAPERQ9BY12 RNU6-380P-201ENST00000410207 107 ntBASIC-4.92□□□□□ -3.2
SCAPERQ9BY12 MIR4795-201ENST00000584182 89 ntBASIC-4.92□□□□□ -3.2
SCAPERQ9BY12 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.93□□□□□ -3.2
SCAPERQ9BY12 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.93□□□□□ -3.2
SCAPERQ9BY12 Y_RNA.662-201ENST00000516028 97 ntBASIC-4.93□□□□□ -3.2
SCAPERQ9BY12 MIR548AI-201ENST00000579940 88 ntBASIC-4.93□□□□□ -3.2
SCAPERQ9BY12 MIR4668-201ENST00000582284 70 ntBASIC-4.93□□□□□ -3.2
SCAPERQ9BY12 RNU6-196P-201ENST00000384315 107 ntBASIC-4.94□□□□□ -3.2
SCAPERQ9BY12 MIR590-201ENST00000385008 97 ntBASIC-4.94□□□□□ -3.2
SCAPERQ9BY12 RNU6-623P-201ENST00000363143 105 ntBASIC-4.96□□□□□ -3.2
SCAPERQ9BY12 RNU6-788P-201ENST00000390967 104 ntBASIC-4.96□□□□□ -3.2
SCAPERQ9BY12 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.96□□□□□ -3.2
SCAPERQ9BY12 RNU6-422P-201ENST00000384632 107 ntBASIC-4.97□□□□□ -3.2
SCAPERQ9BY12 MIR569-201ENST00000385228 96 ntBASIC-4.97□□□□□ -3.2
SCAPERQ9BY12 MIR664A-201ENST00000626086 82 ntBASIC-4.97□□□□□ -3.2
SCAPERQ9BY12 RNU6-836P-201ENST00000362920 107 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 SNORD116-18-201ENST00000383961 92 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 SNORD116-24-201ENST00000384549 92 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 SNORD115.2-201ENST00000391126 59 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 AC134503.1-201ENST00000633048 54 ntBASIC-4.97□□□□□ -3.21
SCAPERQ9BY12 RNU6-895P-201ENST00000384125 103 ntBASIC-4.99□□□□□ -3.21
SCAPERQ9BY12 RNU6-875P-201ENST00000516488 106 ntBASIC-4.99□□□□□ -3.21
SCAPERQ9BY12 SNORA40.16-201ENST00000517238 121 ntBASIC-4.99□□□□□ -3.21
SCAPERQ9BY12 MIR3914-2-201ENST00000637339 95 ntBASIC-4.99□□□□□ -3.21
SCAPERQ9BY12 Y_RNA.335-201ENST00000365299 96 ntBASIC-5□□□□□ -3.21
SCAPERQ9BY12 RNU6-111P-201ENST00000517179 105 ntBASIC-5□□□□□ -3.21
SCAPERQ9BY12 SNORD33.1-201ENST00000516213 88 ntBASIC-5.01□□□□□ -3.21
SCAPERQ9BY12 MIR1302-5-201ENST00000408164 150 ntBASIC-5.02□□□□□ -3.21
SCAPERQ9BY12 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.03□□□□□ -3.21
SCAPERQ9BY12 Y_RNA.818-201ENST00000618813 71 ntBASIC-5.03□□□□□ -3.21
SCAPERQ9BY12 RNU7-107P-201ENST00000459121 61 ntBASIC-5.04□□□□□ -3.22
SCAPERQ9BY12 RNU7-119P-201ENST00000459279 63 ntBASIC-5.04□□□□□ -3.22
SCAPERQ9BY12 U6.95-201ENST00000636931 70 ntBASIC-5.04□□□□□ -3.22
SCAPERQ9BY12 RNA5SP449-201ENST00000516871 130 ntBASIC-5.05□□□□□ -3.22
SCAPERQ9BY12 Y_RNA.216-201ENST00000364205 93 ntBASIC-5.06□□□□□ -3.22
SCAPERQ9BY12 Y_RNA.290-201ENST00000364879 114 ntBASIC-5.06□□□□□ -3.22
SCAPERQ9BY12 MTND4LP9-201ENST00000427694 174 ntBASIC-5.06□□□□□ -3.22
SCAPERQ9BY12 MTATP8P1-201ENST00000467115 207 ntBASIC-5.06□□□□□ -3.22
SCAPERQ9BY12 MIR3128-201ENST00000581957 66 ntBASIC-5.06□□□□□ -3.22
SCAPERQ9BY12 MTND4P29-201ENST00000503122 1372 ntBASIC-5.07□□□□□ -3.22
SCAPERQ9BY12 Y_RNA.350-201ENST00000365409 98 ntBASIC-5.07□□□□□ -3.22
SCAPERQ9BY12 RNU6-109P-201ENST00000516364 107 ntBASIC-5.08□□□□□ -3.22
SCAPERQ9BY12 RNU6-184P-201ENST00000516514 107 ntBASIC-5.08□□□□□ -3.22
SCAPERQ9BY12 MIR154-201ENST00000385243 84 ntBASIC-5.09□□□□□ -3.22
SCAPERQ9BY12 Y_RNA.712-201ENST00000517011 92 ntBASIC-5.09□□□□□ -3.22
SCAPERQ9BY12 RNU6-419P-201ENST00000517030 63 ntBASIC-5.09□□□□□ -3.22
SCAPERQ9BY12 MIR3171-201ENST00000584270 74 ntBASIC-5.09□□□□□ -3.22
SCAPERQ9BY12 SNORD116-22-201ENST00000384430 92 ntBASIC-5.1□□□□□ -3.23
SCAPERQ9BY12 RNU6-394P-201ENST00000410735 107 ntBASIC-5.1□□□□□ -3.23
SCAPERQ9BY12 MIR548BB-201ENST00000626714 66 ntBASIC-5.1□□□□□ -3.23
SCAPERQ9BY12 SNORA20.1-201ENST00000364790 130 ntBASIC-5.11□□□□□ -3.23
SCAPERQ9BY12 Y_RNA.544-201ENST00000384650 113 ntBASIC-5.11□□□□□ -3.23
SCAPERQ9BY12 RNU6-1023P-201ENST00000516137 106 ntBASIC-5.12□□□□□ -3.23
SCAPERQ9BY12 MIR4317-201ENST00000637586 65 ntBASIC-5.12□□□□□ -3.23
SCAPERQ9BY12 RNU6-497P-201ENST00000365316 104 ntBASIC-5.14□□□□□ -3.23
SCAPERQ9BY12 AL589823.1-201ENST00000429577 183 ntBASIC-5.14□□□□□ -3.23
SCAPERQ9BY12 RNU7-120P-201ENST00000459334 63 ntBASIC-5.14□□□□□ -3.23
SCAPERQ9BY12 AP000770.2-201ENST00000623694 100 ntBASIC-5.14□□□□□ -3.23
SCAPERQ9BY12 RNU6-426P-201ENST00000516464 97 ntBASIC-5.14□□□□□ -3.23
SCAPERQ9BY12 RNU4-85P-201ENST00000364675 123 ntBASIC-5.17□□□□□ -3.24
SCAPERQ9BY12 SNORD116-21-201ENST00000384507 92 ntBASIC-5.17□□□□□ -3.24
SCAPERQ9BY12 SNORA19-201ENST00000384737 128 ntBASIC-5.17□□□□□ -3.24
SCAPERQ9BY12 SNORA40-201ENST00000388090 126 ntBASIC-5.17□□□□□ -3.24
SCAPERQ9BY12 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-5.17□□□□□ -3.24
SCAPERQ9BY12 RNU6-219P-201ENST00000364728 107 ntBASIC-5.18□□□□□ -3.24
SCAPERQ9BY12 MIR363-201ENST00000384840 75 ntBASIC-5.18□□□□□ -3.24
SCAPERQ9BY12 MIR545-201ENST00000385085 106 ntBASIC-5.18□□□□□ -3.24
SCAPERQ9BY12 U6atac.1-201ENST00000616025 117 ntBASIC-5.18□□□□□ -3.24
SCAPERQ9BY12 Y_RNA.297-201ENST00000364950 91 ntBASIC-5.19□□□□□ -3.24
SCAPERQ9BY12 Y_RNA.138-201ENST00000363462 102 ntBASIC-5.2□□□□□ -3.24
SCAPERQ9BY12 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.2□□□□□ -3.24
SCAPERQ9BY12 Y_RNA.611-201ENST00000410682 108 ntBASIC-5.21□□□□□ -3.24
SCAPERQ9BY12 RNU6-70P-201ENST00000516438 60 ntBASIC-5.21□□□□□ -3.24
SCAPERQ9BY12 MT-TD-201ENST00000387419 68 ntBASIC-5.22□□□□□ -3.24
SCAPERQ9BY12 RNU6-267P-201ENST00000516714 103 ntBASIC-5.22□□□□□ -3.24
SCAPERQ9BY12 RNU6-122P-201ENST00000516818 107 ntBASIC-5.22□□□□□ -3.24
SCAPERQ9BY12 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.23□□□□□ -3.25
SCAPERQ9BY12 MIR548F4-201ENST00000408515 105 ntBASIC-5.24□□□□□ -3.25
SCAPERQ9BY12 AC004792.1-201ENST00000614523 137 ntBASIC-5.24□□□□□ -3.25
SCAPERQ9BY12 RNU6-804P-201ENST00000384286 107 ntBASIC-5.25□□□□□ -3.25
SCAPERQ9BY12 SNORA25.5-201ENST00000363782 126 ntBASIC-5.26□□□□□ -3.25
SCAPERQ9BY12 RNU6-1134P-201ENST00000365156 101 ntBASIC-5.26□□□□□ -3.25
SCAPERQ9BY12 MIR2052-201ENST00000636055 55 ntBASIC-5.26□□□□□ -3.25
SCAPERQ9BY12 AC006160.2-201ENST00000637708 154 ntBASIC-5.26□□□□□ -3.25
SCAPERQ9BY12 RNU6-315P-201ENST00000362666 107 ntBASIC-5.27□□□□□ -3.25
SCAPERQ9BY12 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.28□□□□□ -3.25
SCAPERQ9BY12 MIR4801-201ENST00000582704 82 ntBASIC-5.29□□□□□ -3.26
SCAPERQ9BY12 Y_RNA.720-201ENST00000517166 92 ntBASIC-5.3□□□□□ -3.26
SCAPERQ9BY12 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.31□□□□□ -3.26
SCAPERQ9BY12 RNU6-797P-201ENST00000363101 109 ntBASIC-5.31□□□□□ -3.26
SCAPERQ9BY12 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.31□□□□□ -3.26
SCAPERQ9BY12 RNU6-257P-201ENST00000410238 98 ntBASIC-5.31□□□□□ -3.26
SCAPERQ9BY12 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.31□□□□□ -3.26
SCAPERQ9BY12 RNU6-776P-201ENST00000364403 104 ntBASIC-5.32□□□□□ -3.26
SCAPERQ9BY12 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.32□□□□□ -3.26
SCAPERQ9BY12 AC062037.2-201ENST00000610137 73 ntBASIC-5.32□□□□□ -3.26
SCAPERQ9BY12 RNU6-379P-201ENST00000363813 104 ntBASIC-5.34□□□□□ -3.26
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms