Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC018880.2-201ENST00000414265 201 ntBASIC-1.25□□□□□ -2.61
FOXC2Q99958 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.26□□□□□ -2.61
FOXC2Q99958 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.26□□□□□ -2.61
FOXC2Q99958 MIR125B1-201ENST00000385236 88 ntBASIC-1.27□□□□□ -2.61
FOXC2Q99958 MIR7978-201ENST00000636158 59 ntBASIC-1.27□□□□□ -2.61
FOXC2Q99958 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU6-540P-201ENST00000384622 101 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU6-400P-201ENST00000391173 106 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU6-523P-201ENST00000516304 54 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU7-151P-201ENST00000516930 53 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 MIR4770-201ENST00000579149 58 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU6-92P-201ENST00000605893 104 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 U7.4-201ENST00000614961 63 ntBASIC-1.28□□□□□ -2.61
FOXC2Q99958 RNU6-634P-201ENST00000459134 106 ntBASIC-1.29□□□□□ -2.62
FOXC2Q99958 RNU6-172P-201ENST00000411000 93 ntBASIC-1.3□□□□□ -2.62
FOXC2Q99958 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.31□□□□□ -2.62
FOXC2Q99958 MIR5591-201ENST00000578248 65 ntBASIC-1.31□□□□□ -2.62
FOXC2Q99958 SNORA27.2-201ENST00000363365 126 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 RNU6-669P-201ENST00000365575 107 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 RNU6-995P-201ENST00000391244 107 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 MIR4520-1-201ENST00000582609 70 ntBASIC-1.32□□□□□ -2.62
FOXC2Q99958 SNORD60.1-201ENST00000362451 73 ntBASIC-1.33□□□□□ -2.62
FOXC2Q99958 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.33□□□□□ -2.62
FOXC2Q99958 SNORD73B-201ENST00000364394 72 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 MIR579-201ENST00000385221 98 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 HLA-S-202ENST00000425174 53 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 AC120024.2-201ENST00000576526 175 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 MIR3202-2-201ENST00000635980 79 ntBASIC-1.34□□□□□ -2.62
FOXC2Q99958 RNU6-247P-201ENST00000362636 107 ntBASIC-1.35□□□□□ -2.63
FOXC2Q99958 RNU6-563P-201ENST00000364872 108 ntBASIC-1.35□□□□□ -2.63
FOXC2Q99958 RNU7-160P-201ENST00000516660 62 ntBASIC-1.35□□□□□ -2.63
FOXC2Q99958 RNA5SP170-201ENST00000517150 101 ntBASIC-1.35□□□□□ -2.63
FOXC2Q99958 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.36□□□□□ -2.63
FOXC2Q99958 RNU6-663P-201ENST00000391105 106 ntBASIC-1.36□□□□□ -2.63
FOXC2Q99958 RNA5SP86-201ENST00000390869 98 ntBASIC-1.37□□□□□ -2.63
FOXC2Q99958 RNU6-279P-201ENST00000391297 101 ntBASIC-1.37□□□□□ -2.63
FOXC2Q99958 SNORD63.2-201ENST00000516303 64 ntBASIC-1.37□□□□□ -2.63
FOXC2Q99958 RNU6-974P-201ENST00000384099 108 ntBASIC-1.38□□□□□ -2.63
FOXC2Q99958 RNY4P29-201ENST00000410801 97 ntBASIC-1.38□□□□□ -2.63
FOXC2Q99958 AC005520.4-201ENST00000604337 90 ntBASIC-1.38□□□□□ -2.63
FOXC2Q99958 MIR7110-201ENST00000612638 86 ntBASIC-1.38□□□□□ -2.63
FOXC2Q99958 MIR1246-201ENST00000636535 73 ntBASIC-1.38□□□□□ -2.63
FOXC2Q99958 RNU6-228P-201ENST00000362700 106 ntBASIC-1.39□□□□□ -2.63
FOXC2Q99958 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.39□□□□□ -2.63
FOXC2Q99958 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.39□□□□□ -2.63
FOXC2Q99958 RNU6-573P-201ENST00000383938 106 ntBASIC-1.39□□□□□ -2.63
FOXC2Q99958 RNU6-122P-201ENST00000516818 107 ntBASIC-1.39□□□□□ -2.63
FOXC2Q99958 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 SNORA25.4-201ENST00000363666 124 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 RNU6-695P-201ENST00000391157 104 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 RNU6-857P-201ENST00000515893 110 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 RNU6-231P-201ENST00000517122 103 ntBASIC-1.4□□□□□ -2.63
FOXC2Q99958 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.41□□□□□ -2.64
FOXC2Q99958 SNORA25.5-201ENST00000363782 126 ntBASIC-1.41□□□□□ -2.64
FOXC2Q99958 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.41□□□□□ -2.64
FOXC2Q99958 MIR1255A-201ENST00000408338 113 ntBASIC-1.41□□□□□ -2.64
FOXC2Q99958 AC013734.1-201ENST00000619329 111 ntBASIC-1.42□□□□□ -2.64
FOXC2Q99958 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.43□□□□□ -2.64
FOXC2Q99958 SNORA26.2-201ENST00000390922 122 ntBASIC-1.43□□□□□ -2.64
FOXC2Q99958 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.44□□□□□ -2.64
FOXC2Q99958 RNU6-810P-201ENST00000364001 107 ntBASIC-1.44□□□□□ -2.64
FOXC2Q99958 MIR548H1-201ENST00000408610 102 ntBASIC-1.44□□□□□ -2.64
FOXC2Q99958 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.44□□□□□ -2.64
FOXC2Q99958 MIR4511-201ENST00000582784 87 ntBASIC-1.44□□□□□ -2.64
FOXC2Q99958 RNU6-828P-201ENST00000364876 107 ntBASIC-1.45□□□□□ -2.64
FOXC2Q99958 SNORD30.1-201ENST00000391309 70 ntBASIC-1.45□□□□□ -2.64
FOXC2Q99958 RNU6-871P-201ENST00000516122 100 ntBASIC-1.45□□□□□ -2.64
FOXC2Q99958 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.46□□□□□ -2.64
FOXC2Q99958 RNY3P8-201ENST00000411366 126 ntBASIC-1.46□□□□□ -2.64
FOXC2Q99958 MIR3123-201ENST00000583417 75 ntBASIC-1.46□□□□□ -2.64
FOXC2Q99958 U6.111-201ENST00000636093 83 ntBASIC-1.46□□□□□ -2.64
FOXC2Q99958 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 SNORA40B-201ENST00000385573 128 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 RNU6-539P-201ENST00000516665 103 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 SNORA40.16-201ENST00000517238 121 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 AC103706.3-201ENST00000636297 85 ntBASIC-1.47□□□□□ -2.64
FOXC2Q99958 RNU6-649P-201ENST00000384463 107 ntBASIC-1.48□□□□□ -2.65
FOXC2Q99958 SNORD78.1-201ENST00000390866 65 ntBASIC-1.48□□□□□ -2.65
FOXC2Q99958 RNU6-841P-201ENST00000383872 107 ntBASIC-1.49□□□□□ -2.65
FOXC2Q99958 RNU6-520P-201ENST00000384717 104 ntBASIC-1.49□□□□□ -2.65
FOXC2Q99958 SNORD116.2-201ENST00000391251 93 ntBASIC-1.49□□□□□ -2.65
FOXC2Q99958 RNY4P7-201ENST00000364600 96 ntBASIC-1.5□□□□□ -2.65
FOXC2Q99958 MIR487B-201ENST00000385021 84 ntBASIC-1.5□□□□□ -2.65
FOXC2Q99958 RNU6-226P-201ENST00000363778 107 ntBASIC-1.51□□□□□ -2.65
FOXC2Q99958 MIR1302-4-201ENST00000408701 150 ntBASIC-1.51□□□□□ -2.65
FOXC2Q99958 RNU7-119P-201ENST00000459279 63 ntBASIC-1.51□□□□□ -2.65
FOXC2Q99958 RNU6-940P-201ENST00000363433 104 ntBASIC-1.52□□□□□ -2.65
FOXC2Q99958 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.52□□□□□ -2.65
FOXC2Q99958 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.52□□□□□ -2.65
FOXC2Q99958 RNU6-361P-201ENST00000364454 107 ntBASIC-1.53□□□□□ -2.65
FOXC2Q99958 RNU6-119P-201ENST00000364882 107 ntBASIC-1.53□□□□□ -2.65
FOXC2Q99958 MIR581-201ENST00000384895 96 ntBASIC-1.53□□□□□ -2.65
FOXC2Q99958 RNA5SP225-201ENST00000410874 135 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms