Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-380P-201ENST00000410207 107 ntBASIC-5.25□□□□□ -3.25
ABCA3Q99758 RNU6-1137P-201ENST00000517073 99 ntBASIC-5.25□□□□□ -3.25
ABCA3Q99758 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.26□□□□□ -3.25
ABCA3Q99758 RNU6-162P-201ENST00000516228 103 ntBASIC-5.26□□□□□ -3.25
ABCA3Q99758 SNORA63.4-201ENST00000362763 126 ntBASIC-5.26□□□□□ -3.25
ABCA3Q99758 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.26□□□□□ -3.25
ABCA3Q99758 MIRLET7A1-201ENST00000362295 80 ntBASIC-5.27□□□□□ -3.25
ABCA3Q99758 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.27□□□□□ -3.25
ABCA3Q99758 RNU6-474P-201ENST00000384243 107 ntBASIC-5.27□□□□□ -3.25
ABCA3Q99758 MIR548X2-201ENST00000579776 100 ntBASIC-5.27□□□□□ -3.25
ABCA3Q99758 MIR548AI-201ENST00000579940 88 ntBASIC-5.27□□□□□ -3.25
ABCA3Q99758 Y_RNA.662-201ENST00000516028 97 ntBASIC-5.28□□□□□ -3.25
ABCA3Q99758 Y_RNA.93-201ENST00000363066 109 ntBASIC-5.28□□□□□ -3.26
ABCA3Q99758 SNORA40.16-201ENST00000517238 121 ntBASIC-5.28□□□□□ -3.26
ABCA3Q99758 RNU7-119P-201ENST00000459279 63 ntBASIC-5.31□□□□□ -3.26
ABCA3Q99758 MTATP8P2-201ENST00000435212 202 ntBASIC-5.32□□□□□ -3.26
ABCA3Q99758 Y_RNA.107-201ENST00000363190 121 ntBASIC-5.33□□□□□ -3.26
ABCA3Q99758 RNU6-659P-201ENST00000516454 104 ntBASIC-5.33□□□□□ -3.26
ABCA3Q99758 SNORD116-22-201ENST00000384430 92 ntBASIC-5.34□□□□□ -3.26
ABCA3Q99758 Y_RNA.431-201ENST00000384086 102 ntBASIC-5.35□□□□□ -3.27
ABCA3Q99758 Y_RNA.544-201ENST00000384650 113 ntBASIC-5.35□□□□□ -3.27
ABCA3Q99758 Y_RNA.580-201ENST00000391004 95 ntBASIC-5.35□□□□□ -3.27
ABCA3Q99758 Y_RNA.219-201ENST00000364232 113 ntBASIC-5.36□□□□□ -3.27
ABCA3Q99758 MIR154-201ENST00000385243 84 ntBASIC-5.36□□□□□ -3.27
ABCA3Q99758 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.37□□□□□ -3.27
ABCA3Q99758 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.37□□□□□ -3.27
ABCA3Q99758 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.37□□□□□ -3.27
ABCA3Q99758 AC134503.1-201ENST00000633048 54 ntBASIC-5.37□□□□□ -3.27
ABCA3Q99758 Y_RNA.532-201ENST00000384590 113 ntBASIC-5.38□□□□□ -3.27
ABCA3Q99758 MIR4668-201ENST00000582284 70 ntBASIC-5.4□□□□□ -3.27
ABCA3Q99758 MIR590-201ENST00000385008 97 ntBASIC-5.4□□□□□ -3.27
ABCA3Q99758 U6atac.1-201ENST00000616025 117 ntBASIC-5.4□□□□□ -3.27
ABCA3Q99758 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.41□□□□□ -3.28
ABCA3Q99758 RNU6-267P-201ENST00000516714 103 ntBASIC-5.41□□□□□ -3.28
ABCA3Q99758 Y_RNA.818-201ENST00000618813 71 ntBASIC-5.41□□□□□ -3.28
ABCA3Q99758 MIR664A-201ENST00000626086 82 ntBASIC-5.41□□□□□ -3.28
ABCA3Q99758 RNU6-379P-201ENST00000363813 104 ntBASIC-5.42□□□□□ -3.28
ABCA3Q99758 SNORD116-24-201ENST00000384549 92 ntBASIC-5.42□□□□□ -3.28
ABCA3Q99758 SNORA25.5-201ENST00000363782 126 ntBASIC-5.45□□□□□ -3.28
ABCA3Q99758 RNU6-875P-201ENST00000516488 106 ntBASIC-5.45□□□□□ -3.28
ABCA3Q99758 RNU6-776P-201ENST00000364403 104 ntBASIC-5.46□□□□□ -3.28
ABCA3Q99758 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.46□□□□□ -3.28
ABCA3Q99758 AC006160.2-201ENST00000637708 154 ntBASIC-5.46□□□□□ -3.28
ABCA3Q99758 AL117187.1-201ENST00000555482 181 ntBASIC-5.47□□□□□ -3.29
ABCA3Q99758 MIR4801-201ENST00000582704 82 ntBASIC-5.47□□□□□ -3.29
ABCA3Q99758 MIR4795-201ENST00000584182 89 ntBASIC-5.47□□□□□ -3.29
ABCA3Q99758 MIR4484-201ENST00000582855 83 ntBASIC-5.48□□□□□ -3.29
ABCA3Q99758 Y_RNA.350-201ENST00000365409 98 ntBASIC-5.49□□□□□ -3.29
ABCA3Q99758 MIR2052-201ENST00000636055 55 ntBASIC-5.5□□□□□ -3.29
ABCA3Q99758 Y_RNA.356-201ENST00000365475 113 ntBASIC-5.51□□□□□ -3.29
ABCA3Q99758 RNU6-70P-201ENST00000516438 60 ntBASIC-5.51□□□□□ -3.29
ABCA3Q99758 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-5.51□□□□□ -3.29
ABCA3Q99758 MTND4LP9-201ENST00000427694 174 ntBASIC-5.52□□□□□ -3.29
ABCA3Q99758 Y_RNA.290-201ENST00000364879 114 ntBASIC-5.53□□□□□ -3.29
ABCA3Q99758 MIR1302-5-201ENST00000408164 150 ntBASIC-5.53□□□□□ -3.29
ABCA3Q99758 RNU6-394P-201ENST00000410735 107 ntBASIC-5.53□□□□□ -3.29
ABCA3Q99758 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.53□□□□□ -3.29
ABCA3Q99758 MIR3171-201ENST00000584270 74 ntBASIC-5.53□□□□□ -3.29
ABCA3Q99758 RNU6-895P-201ENST00000384125 103 ntBASIC-5.54□□□□□ -3.3
ABCA3Q99758 MIR3914-2-201ENST00000637339 95 ntBASIC-5.54□□□□□ -3.3
ABCA3Q99758 MIR548X-201ENST00000580069 75 ntBASIC-5.54□□□□□ -3.3
ABCA3Q99758 MIR3128-201ENST00000581957 66 ntBASIC-5.54□□□□□ -3.3
ABCA3Q99758 MIR4760-201ENST00000585040 80 ntBASIC-5.54□□□□□ -3.3
ABCA3Q99758 RNU6-623P-201ENST00000363143 105 ntBASIC-5.55□□□□□ -3.3
ABCA3Q99758 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-5.55□□□□□ -3.3
ABCA3Q99758 Y_RNA.611-201ENST00000410682 108 ntBASIC-5.56□□□□□ -3.3
ABCA3Q99758 Y_RNA.574-201ENST00000384766 95 ntBASIC-5.57□□□□□ -3.3
ABCA3Q99758 SNORD116-18-201ENST00000383961 92 ntBASIC-5.58□□□□□ -3.3
ABCA3Q99758 SNORD33.1-201ENST00000516213 88 ntBASIC-5.58□□□□□ -3.3
ABCA3Q99758 SNORA20.1-201ENST00000364790 130 ntBASIC-5.59□□□□□ -3.3
ABCA3Q99758 MIR569-201ENST00000385228 96 ntBASIC-5.59□□□□□ -3.3
ABCA3Q99758 RNU7-107P-201ENST00000459121 61 ntBASIC-5.59□□□□□ -3.3
ABCA3Q99758 RNU6-111P-201ENST00000517179 105 ntBASIC-5.59□□□□□ -3.3
ABCA3Q99758 MIR548BB-201ENST00000626714 66 ntBASIC-5.59□□□□□ -3.3
ABCA3Q99758 SNORA19-201ENST00000384737 128 ntBASIC-5.6□□□□□ -3.31
ABCA3Q99758 Y_RNA.607-201ENST00000410597 98 ntBASIC-5.6□□□□□ -3.31
ABCA3Q99758 RNU6-426P-201ENST00000516464 97 ntBASIC-5.6□□□□□ -3.31
ABCA3Q99758 RNU6-940P-201ENST00000363433 104 ntBASIC-5.61□□□□□ -3.31
ABCA3Q99758 RNU7-120P-201ENST00000459334 63 ntBASIC-5.61□□□□□ -3.31
ABCA3Q99758 SNORA40-201ENST00000388090 126 ntBASIC-5.62□□□□□ -3.31
ABCA3Q99758 MIR548H4-201ENST00000408689 111 ntBASIC-5.62□□□□□ -3.31
ABCA3Q99758 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.62□□□□□ -3.31
ABCA3Q99758 U6.95-201ENST00000636931 70 ntBASIC-5.62□□□□□ -3.31
ABCA3Q99758 MTND4P29-201ENST00000503122 1372 ntBASIC-5.64□□□□□ -3.31
ABCA3Q99758 RNU6-1023P-201ENST00000516137 106 ntBASIC-5.65□□□□□ -3.31
ABCA3Q99758 RNU6-109P-201ENST00000516364 107 ntBASIC-5.65□□□□□ -3.31
ABCA3Q99758 RNU6-184P-201ENST00000516514 107 ntBASIC-5.65□□□□□ -3.31
ABCA3Q99758 MIR3938-201ENST00000582157 103 ntBASIC-5.66□□□□□ -3.32
ABCA3Q99758 SNORD116-21-201ENST00000384507 92 ntBASIC-5.67□□□□□ -3.32
ABCA3Q99758 Y_RNA.216-201ENST00000364205 93 ntBASIC-5.68□□□□□ -3.32
ABCA3Q99758 RNU6-497P-201ENST00000365316 104 ntBASIC-5.68□□□□□ -3.32
ABCA3Q99758 RNU6-979P-201ENST00000383896 107 ntBASIC-5.68□□□□□ -3.32
ABCA3Q99758 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.68□□□□□ -3.32
ABCA3Q99758 AC004792.1-201ENST00000614523 137 ntBASIC-5.69□□□□□ -3.32
ABCA3Q99758 RNU6-797P-201ENST00000363101 109 ntBASIC-5.7□□□□□ -3.32
ABCA3Q99758 RNU6-219P-201ENST00000364728 107 ntBASIC-5.7□□□□□ -3.32
ABCA3Q99758 Y_RNA.712-201ENST00000517011 92 ntBASIC-5.71□□□□□ -3.32
ABCA3Q99758 RNU6-122P-201ENST00000516818 107 ntBASIC-5.72□□□□□ -3.33
ABCA3Q99758 AC090425.1-201ENST00000610007 140 ntBASIC-5.73□□□□□ -3.33
ABCA3Q99758 RNU6-315P-201ENST00000362666 107 ntBASIC-5.74□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms