Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RNU6-1257P-201ENST00000384625 110 ntBASIC-6.9□□□□□ -3.51
VPS13AQ96RL7 RNU6-1188P-201ENST00000363795 107 ntBASIC-6.9□□□□□ -3.51
VPS13AQ96RL7 Y_RNA.273-201ENST00000364703 102 ntBASIC-6.9□□□□□ -3.51
VPS13AQ96RL7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-6.91□□□□□ -3.52
VPS13AQ96RL7 Y_RNA.661-201ENST00000516003 99 ntBASIC-6.91□□□□□ -3.52
VPS13AQ96RL7 Y_RNA.632-201ENST00000459189 102 ntBASIC-6.92□□□□□ -3.52
VPS13AQ96RL7 RNU6-772P-201ENST00000516042 105 ntBASIC-6.92□□□□□ -3.52
VPS13AQ96RL7 MIR559-201ENST00000385188 96 ntBASIC-6.94□□□□□ -3.52
VPS13AQ96RL7 RNU7-197P-201ENST00000458836 62 ntBASIC-6.94□□□□□ -3.52
VPS13AQ96RL7 AC090582.1-201ENST00000636321 199 ntBASIC-6.94□□□□□ -3.52
VPS13AQ96RL7 RNU6-675P-201ENST00000384236 104 ntBASIC-6.95□□□□□ -3.52
VPS13AQ96RL7 Y_RNA.94-201ENST00000363068 106 ntBASIC-6.96□□□□□ -3.52
VPS13AQ96RL7 SNORA40.15-201ENST00000516884 107 ntBASIC-6.96□□□□□ -3.52
VPS13AQ96RL7 MTND2P14-201ENST00000482139 351 ntBASIC-6.98□□□□□ -3.53
VPS13AQ96RL7 SNORA81.3-201ENST00000517283 198 ntBASIC-6.98□□□□□ -3.53
VPS13AQ96RL7 Y_RNA.88-201ENST00000363029 99 ntBASIC-6.98□□□□□ -3.53
VPS13AQ96RL7 RNU6-930P-201ENST00000390938 100 ntBASIC-6.98□□□□□ -3.53
VPS13AQ96RL7 RNU6-1143P-201ENST00000516125 104 ntBASIC-6.98□□□□□ -3.53
VPS13AQ96RL7 snoMBII-202.2-201ENST00000517263 86 ntBASIC-6.99□□□□□ -3.53
VPS13AQ96RL7 RNU6-871P-201ENST00000516122 100 ntBASIC-7□□□□□ -3.53
VPS13AQ96RL7 MIR1245B-201ENST00000636115 69 ntBASIC-7.01□□□□□ -3.53
VPS13AQ96RL7 RNU6-463P-201ENST00000384340 107 ntBASIC-7.02□□□□□ -3.53
VPS13AQ96RL7 MIR548T-201ENST00000408369 74 ntBASIC-7.02□□□□□ -3.53
VPS13AQ96RL7 Y_RNA.19-201ENST00000362462 99 ntBASIC-7.03□□□□□ -3.54
VPS13AQ96RL7 MTND5P22-201ENST00000458380 195 ntBASIC-7.04□□□□□ -3.54
VPS13AQ96RL7 Y_RNA.316-201ENST00000365118 111 ntBASIC-7.06□□□□□ -3.54
VPS13AQ96RL7 Y_RNA.545-201ENST00000384652 105 ntBASIC-7.06□□□□□ -3.54
VPS13AQ96RL7 RNU6-918P-201ENST00000391219 106 ntBASIC-7.06□□□□□ -3.54
VPS13AQ96RL7 Y_RNA.579-201ENST00000390939 94 ntBASIC-7.07□□□□□ -3.54
VPS13AQ96RL7 Y_RNA.496-201ENST00000384444 101 ntBASIC-7.08□□□□□ -3.54
VPS13AQ96RL7 U6.111-201ENST00000636093 83 ntBASIC-7.08□□□□□ -3.54
VPS13AQ96RL7 MIR6863-201ENST00000636112 90 ntBASIC-7.08□□□□□ -3.54
VPS13AQ96RL7 RNU6-988P-201ENST00000519081 107 ntBASIC-7.08□□□□□ -3.54
VPS13AQ96RL7 RNU6-1085P-201ENST00000363576 107 ntBASIC-7.09□□□□□ -3.54
VPS13AQ96RL7 RNU6-471P-201ENST00000383944 106 ntBASIC-7.1□□□□□ -3.55
VPS13AQ96RL7 MIR4712-201ENST00000583750 82 ntBASIC-7.1□□□□□ -3.55
VPS13AQ96RL7 MIR5690-201ENST00000583739 73 ntBASIC-7.11□□□□□ -3.55
VPS13AQ96RL7 MIR4643-201ENST00000577473 78 ntBASIC-7.13□□□□□ -3.55
VPS13AQ96RL7 RNU6-908P-201ENST00000410160 94 ntBASIC-7.14□□□□□ -3.55
VPS13AQ96RL7 Y_RNA.26-201ENST00000362539 101 ntBASIC-7.16□□□□□ -3.55
VPS13AQ96RL7 RNU6-844P-201ENST00000517175 102 ntBASIC-7.16□□□□□ -3.55
VPS13AQ96RL7 RNU7-171P-201ENST00000459581 62 ntBASIC-7.16□□□□□ -3.56
VPS13AQ96RL7 Y_RNA.619-201ENST00000410951 90 ntBASIC-7.17□□□□□ -3.56
VPS13AQ96RL7 MTND2P30-201ENST00000456663 382 ntBASIC-7.18□□□□□ -3.56
VPS13AQ96RL7 Y_RNA.73-201ENST00000362910 113 ntBASIC-7.18□□□□□ -3.56
VPS13AQ96RL7 MTND4LP32-201ENST00000636111 270 ntBASIC-7.18□□□□□ -3.56
VPS13AQ96RL7 SNORD116-21-201ENST00000384507 92 ntBASIC-7.19□□□□□ -3.56
VPS13AQ96RL7 AC109635.3-201ENST00000529536 185 ntBASIC-7.19□□□□□ -3.56
VPS13AQ96RL7 RNU6-823P-201ENST00000391042 103 ntBASIC-7.2□□□□□ -3.56
VPS13AQ96RL7 Y_RNA.516-201ENST00000384541 124 ntBASIC-7.2□□□□□ -3.56
VPS13AQ96RL7 RNY3P10-201ENST00000384764 102 ntBASIC-7.21□□□□□ -3.56
VPS13AQ96RL7 AC040904.1-201ENST00000590850 223 ntBASIC-7.21□□□□□ -3.56
VPS13AQ96RL7 U6.95-201ENST00000636931 70 ntBASIC-7.21□□□□□ -3.56
VPS13AQ96RL7 RNU7-107P-201ENST00000459121 61 ntBASIC-7.21□□□□□ -3.56
VPS13AQ96RL7 Y_RNA.535-201ENST00000384612 99 ntBASIC-7.22□□□□□ -3.56
VPS13AQ96RL7 MIR1302-11-201ENST00000408051 138 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 MIR1302-9-201ENST00000408365 138 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 MIR1302-10-201ENST00000408734 138 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 MIR1252-201ENST00000408861 65 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 SNORA40.13-201ENST00000516379 120 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 MIR1302-2-201ENST00000607096 138 ntBASIC-7.22□□□□□ -3.57
VPS13AQ96RL7 SNORA26.8-201ENST00000391306 124 ntBASIC-7.23□□□□□ -3.57
VPS13AQ96RL7 MALAT1.1-201ENST00000618249 95 ntBASIC-7.23□□□□□ -3.57
VPS13AQ96RL7 MIR4528-201ENST00000577763 90 ntBASIC-7.24□□□□□ -3.57
VPS13AQ96RL7 IGLL4P-201ENST00000614590 133 ntBASIC-7.24□□□□□ -3.57
VPS13AQ96RL7 Y_RNA.276-201ENST00000364732 109 ntBASIC-7.27□□□□□ -3.57
VPS13AQ96RL7 DLEU2_1.1-201ENST00000612089 120 ntBASIC-7.27□□□□□ -3.57
VPS13AQ96RL7 MIR3914-2-201ENST00000637339 95 ntBASIC-7.27□□□□□ -3.57
VPS13AQ96RL7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-7.28□□□□□ -3.58
VPS13AQ96RL7 DLEU2_4.2-201ENST00000616613 58 ntBASIC-7.28□□□□□ -3.58
VPS13AQ96RL7 AC004792.1-201ENST00000614523 137 ntBASIC-7.29□□□□□ -3.58
VPS13AQ96RL7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-7.3□□□□□ -3.58
VPS13AQ96RL7 RNU4-71P-201ENST00000516258 113 ntBASIC-7.31□□□□□ -3.58
VPS13AQ96RL7 MIR5588-201ENST00000581890 63 ntBASIC-7.31□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.58-201ENST00000362807 102 ntBASIC-7.32□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.277-201ENST00000364754 102 ntBASIC-7.32□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.626-201ENST00000411288 95 ntBASIC-7.33□□□□□ -3.58
VPS13AQ96RL7 RNU6-936P-201ENST00000384005 107 ntBASIC-7.34□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.645-201ENST00000391229 102 ntBASIC-7.34□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.252-201ENST00000364556 101 ntBASIC-7.34□□□□□ -3.58
VPS13AQ96RL7 Y_RNA.635-201ENST00000459041 101 ntBASIC-7.35□□□□□ -3.59
VPS13AQ96RL7 RNU6-483P-201ENST00000384088 108 ntBASIC-7.35□□□□□ -3.59
VPS13AQ96RL7 AP003461.1-201ENST00000528866 78 ntBASIC-7.35□□□□□ -3.59
VPS13AQ96RL7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-7.35□□□□□ -3.59
VPS13AQ96RL7 MIR548X2-201ENST00000579776 100 ntBASIC-7.36□□□□□ -3.59
VPS13AQ96RL7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-7.36□□□□□ -3.59
VPS13AQ96RL7 RNU4-14P-201ENST00000410858 122 ntBASIC-7.37□□□□□ -3.59
VPS13AQ96RL7 RNU6-1135P-201ENST00000411083 103 ntBASIC-7.37□□□□□ -3.59
VPS13AQ96RL7 Y_RNA.693-201ENST00000516641 110 ntBASIC-7.38□□□□□ -3.59
VPS13AQ96RL7 AL353621.2-201ENST00000605340 133 ntBASIC-7.39□□□□□ -3.59
VPS13AQ96RL7 SNORD116-4-201ENST00000384733 96 ntBASIC-7.4□□□□□ -3.59
VPS13AQ96RL7 Y_RNA.712-201ENST00000517011 92 ntBASIC-7.42□□□□□ -3.6
VPS13AQ96RL7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-7.45□□□□□ -3.6
VPS13AQ96RL7 MIR4666B-201ENST00000578142 81 ntBASIC-7.45□□□□□ -3.6
VPS13AQ96RL7 Y_RNA.89-201ENST00000363031 102 ntBASIC-7.45□□□□□ -3.6
VPS13AQ96RL7 Y_RNA.386-201ENST00000383913 105 ntBASIC-7.48□□□□□ -3.61
VPS13AQ96RL7 Y_RNA.580-201ENST00000391004 95 ntBASIC-7.49□□□□□ -3.61
VPS13AQ96RL7 MTND4LP9-201ENST00000427694 174 ntBASIC-7.49□□□□□ -3.61
VPS13AQ96RL7 MTND4P17-201ENST00000470444 350 ntBASIC-7.49□□□□□ -3.61
VPS13AQ96RL7 RNU7-30P-201ENST00000516835 62 ntBASIC-7.49□□□□□ -3.61
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms