Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-540P-201ENST00000384622 101 ntBASIC-1.21□□□□□ -2.6
ZNF560Q96MR9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.21□□□□□ -2.6
ZNF560Q96MR9 RNU6-92P-201ENST00000605893 104 ntBASIC-1.21□□□□□ -2.6
ZNF560Q96MR9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.22□□□□□ -2.6
ZNF560Q96MR9 RNU6-695P-201ENST00000391157 104 ntBASIC-1.22□□□□□ -2.6
ZNF560Q96MR9 MIR548H1-201ENST00000408610 102 ntBASIC-1.22□□□□□ -2.6
ZNF560Q96MR9 RNU6-542P-201ENST00000516405 103 ntBASIC-1.22□□□□□ -2.6
ZNF560Q96MR9 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.23□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.23□□□□□ -2.61
ZNF560Q96MR9 MIR3123-201ENST00000583417 75 ntBASIC-1.23□□□□□ -2.61
ZNF560Q96MR9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.23□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 SNORA27.2-201ENST00000363365 126 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 RNU6-411P-201ENST00000384451 107 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 RNU6-634P-201ENST00000459134 106 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 MIR23C-201ENST00000579846 100 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 U6.97-201ENST00000636904 101 ntBASIC-1.24□□□□□ -2.61
ZNF560Q96MR9 RNU6-810P-201ENST00000364001 107 ntBASIC-1.25□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.25□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.25□□□□□ -2.61
ZNF560Q96MR9 RNU6-231P-201ENST00000517122 103 ntBASIC-1.25□□□□□ -2.61
ZNF560Q96MR9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.25□□□□□ -2.61
ZNF560Q96MR9 RNU6-663P-201ENST00000391105 106 ntBASIC-1.26□□□□□ -2.61
ZNF560Q96MR9 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.27□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.27□□□□□ -2.61
ZNF560Q96MR9 RNU6-820P-201ENST00000384273 107 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 SNORD116.2-201ENST00000391251 93 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 MIR1468-201ENST00000410600 86 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 MIR7110-201ENST00000612638 86 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 U7.4-201ENST00000614961 63 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.28□□□□□ -2.61
ZNF560Q96MR9 RNU6-228P-201ENST00000362700 106 ntBASIC-1.29□□□□□ -2.62
ZNF560Q96MR9 MIR581-201ENST00000384895 96 ntBASIC-1.29□□□□□ -2.62
ZNF560Q96MR9 SNORA40.16-201ENST00000517238 121 ntBASIC-1.29□□□□□ -2.62
ZNF560Q96MR9 RNU6-573P-201ENST00000383938 106 ntBASIC-1.3□□□□□ -2.62
ZNF560Q96MR9 SNX3P1X-201ENST00000414887 175 ntBASIC-1.3□□□□□ -2.62
ZNF560Q96MR9 RNU7-160P-201ENST00000516660 62 ntBASIC-1.3□□□□□ -2.62
ZNF560Q96MR9 SNORA25.5-201ENST00000363782 126 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 SNORD73B-201ENST00000364394 72 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 RNU6-841P-201ENST00000383872 107 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 AC108019.1-201ENST00000512540 175 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 RNU6-122P-201ENST00000516818 107 ntBASIC-1.31□□□□□ -2.62
ZNF560Q96MR9 MIR202-201ENST00000362219 110 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 SNORA25.4-201ENST00000363666 124 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 SNORD18.1-201ENST00000363807 70 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 RNU6-828P-201ENST00000364876 107 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 RNU6-520P-201ENST00000384717 104 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 SNORA40B-201ENST00000385573 128 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 RNU6-857P-201ENST00000515893 110 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 MIR4756-201ENST00000577874 78 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 MIR548AM-201ENST00000584298 74 ntBASIC-1.32□□□□□ -2.62
ZNF560Q96MR9 MIR1255A-201ENST00000408338 113 ntBASIC-1.33□□□□□ -2.62
ZNF560Q96MR9 SNORD30.1-201ENST00000391309 70 ntBASIC-1.34□□□□□ -2.62
ZNF560Q96MR9 RNA5SP225-201ENST00000410874 135 ntBASIC-1.34□□□□□ -2.62
ZNF560Q96MR9 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.34□□□□□ -2.62
ZNF560Q96MR9 MIR548W-201ENST00000581970 74 ntBASIC-1.34□□□□□ -2.62
ZNF560Q96MR9 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 RNU6-649P-201ENST00000384463 107 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 MIR1285-2-201ENST00000408311 88 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 RNY4P29-201ENST00000410801 97 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 AL627230.5-201ENST00000619807 58 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 MIR3202-2-201ENST00000635980 79 ntBASIC-1.35□□□□□ -2.63
ZNF560Q96MR9 RNA5SP331-201ENST00000364986 107 ntBASIC-1.36□□□□□ -2.63
ZNF560Q96MR9 MIR601-201ENST00000385256 79 ntBASIC-1.36□□□□□ -2.63
ZNF560Q96MR9 snoU13.10-201ENST00000459301 103 ntBASIC-1.36□□□□□ -2.63
ZNF560Q96MR9 RNA5SP170-201ENST00000517150 101 ntBASIC-1.36□□□□□ -2.63
ZNF560Q96MR9 U6.111-201ENST00000636093 83 ntBASIC-1.36□□□□□ -2.63
ZNF560Q96MR9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.37□□□□□ -2.63
ZNF560Q96MR9 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.37□□□□□ -2.63
ZNF560Q96MR9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
ZNF560Q96MR9 RNU6-279P-201ENST00000391297 101 ntBASIC-1.37□□□□□ -2.63
ZNF560Q96MR9 MIR1246-201ENST00000636535 73 ntBASIC-1.37□□□□□ -2.63
ZNF560Q96MR9 RNU4-88P-201ENST00000411220 86 ntBASIC-1.38□□□□□ -2.63
ZNF560Q96MR9 MIR4511-201ENST00000582784 87 ntBASIC-1.38□□□□□ -2.63
ZNF560Q96MR9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.38□□□□□ -2.63
ZNF560Q96MR9 RNU6-530P-201ENST00000391180 107 ntBASIC-1.39□□□□□ -2.63
ZNF560Q96MR9 MIR548N-201ENST00000408742 75 ntBASIC-1.39□□□□□ -2.63
ZNF560Q96MR9 SNORA26.2-201ENST00000390922 122 ntBASIC-1.4□□□□□ -2.63
ZNF560Q96MR9 MIR198-201ENST00000637333 62 ntBASIC-1.4□□□□□ -2.63
ZNF560Q96MR9 SNORD18C-201ENST00000362704 69 ntBASIC-1.41□□□□□ -2.64
ZNF560Q96MR9 MIR365A-201ENST00000362260 87 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 RNU6-361P-201ENST00000364454 107 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 SNORA17.4-201ENST00000391287 132 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 RNU6-980P-201ENST00000516925 103 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 MIR664B-201ENST00000626756 61 ntBASIC-1.42□□□□□ -2.64
ZNF560Q96MR9 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.43□□□□□ -2.64
ZNF560Q96MR9 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.43□□□□□ -2.64
ZNF560Q96MR9 AL451105.1-201ENST00000450005 189 ntBASIC-1.43□□□□□ -2.64
ZNF560Q96MR9 RNU6-68P-201ENST00000516576 104 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms