Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-431P-201ENST00000383874 107 ntBASIC-0.81□□□□□ -2.54
ATG4AQ8WYN0 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.81□□□□□ -2.54
ATG4AQ8WYN0 SNORD116.2-201ENST00000391251 93 ntBASIC-0.81□□□□□ -2.54
ATG4AQ8WYN0 MIR579-201ENST00000385221 98 ntBASIC-0.82□□□□□ -2.54
ATG4AQ8WYN0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.82□□□□□ -2.54
ATG4AQ8WYN0 MIR4490-201ENST00000582647 84 ntBASIC-0.82□□□□□ -2.54
ATG4AQ8WYN0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.83□□□□□ -2.54
ATG4AQ8WYN0 RNU6-520P-201ENST00000384717 104 ntBASIC-0.83□□□□□ -2.54
ATG4AQ8WYN0 SNORD64-201ENST00000386683 67 ntBASIC-0.83□□□□□ -2.54
ATG4AQ8WYN0 MIR7978-201ENST00000636158 59 ntBASIC-0.83□□□□□ -2.54
ATG4AQ8WYN0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.84□□□□□ -2.54
ATG4AQ8WYN0 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.84□□□□□ -2.54
ATG4AQ8WYN0 RNU7-160P-201ENST00000516660 62 ntBASIC-0.84□□□□□ -2.54
ATG4AQ8WYN0 MIR3170-201ENST00000582699 77 ntBASIC-0.84□□□□□ -2.54
ATG4AQ8WYN0 MIR587-201ENST00000384845 96 ntBASIC-0.85□□□□□ -2.55
ATG4AQ8WYN0 RNU6-810P-201ENST00000364001 107 ntBASIC-0.86□□□□□ -2.55
ATG4AQ8WYN0 MIR3115-201ENST00000577915 68 ntBASIC-0.86□□□□□ -2.55
ATG4AQ8WYN0 MIR409-201ENST00000362237 79 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 MIR125B1-201ENST00000385236 88 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 SNORA40B-201ENST00000385573 128 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 RNU6-788P-201ENST00000390967 104 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.87□□□□□ -2.55
ATG4AQ8WYN0 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
ATG4AQ8WYN0 SNORA40.16-201ENST00000517238 121 ntBASIC-0.88□□□□□ -2.55
ATG4AQ8WYN0 RNU6-247P-201ENST00000362636 107 ntBASIC-0.89□□□□□ -2.55
ATG4AQ8WYN0 MIR520D-201ENST00000385002 87 ntBASIC-0.89□□□□□ -2.55
ATG4AQ8WYN0 RNA5SP266-201ENST00000410273 108 ntBASIC-0.89□□□□□ -2.55
ATG4AQ8WYN0 MIR382-201ENST00000637119 76 ntBASIC-0.9□□□□□ -2.55
ATG4AQ8WYN0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.91□□□□□ -2.56
ATG4AQ8WYN0 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.92□□□□□ -2.56
ATG4AQ8WYN0 MIR4306-201ENST00000583390 91 ntBASIC-0.92□□□□□ -2.56
ATG4AQ8WYN0 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.92□□□□□ -2.56
ATG4AQ8WYN0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.94□□□□□ -2.56
ATG4AQ8WYN0 RNU6-828P-201ENST00000364876 107 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 RNU6-608P-201ENST00000383927 104 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 MIR29B1-201ENST00000385015 81 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 RNU7-134P-201ENST00000458997 64 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 RNA5SP461-201ENST00000516451 104 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 MIR3165-201ENST00000579874 75 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 AL627230.5-201ENST00000619807 58 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 MIR4320-201ENST00000636981 65 ntBASIC-0.95□□□□□ -2.56
ATG4AQ8WYN0 MIR8485-201ENST00000401372 91 ntBASIC-0.96□□□□□ -2.56
ATG4AQ8WYN0 RPL35AP4-201ENST00000412007 102 ntBASIC-0.96□□□□□ -2.56
ATG4AQ8WYN0 SNORD63.2-201ENST00000516303 64 ntBASIC-0.96□□□□□ -2.56
ATG4AQ8WYN0 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.96□□□□□ -2.56
ATG4AQ8WYN0 RNA5SP26-201ENST00000362406 119 ntBASIC-0.97□□□□□ -2.56
ATG4AQ8WYN0 MIR633-201ENST00000384821 98 ntBASIC-0.97□□□□□ -2.56
ATG4AQ8WYN0 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.97□□□□□ -2.56
ATG4AQ8WYN0 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 SNX3P1X-201ENST00000414887 175 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 MIR6818-201ENST00000621576 65 ntBASIC-0.98□□□□□ -2.57
ATG4AQ8WYN0 RNU6-446P-201ENST00000362827 106 ntBASIC-0.99□□□□□ -2.57
ATG4AQ8WYN0 RNU6-226P-201ENST00000363778 107 ntBASIC-0.99□□□□□ -2.57
ATG4AQ8WYN0 RNA5SP331-201ENST00000364986 107 ntBASIC-1□□□□□ -2.57
ATG4AQ8WYN0 RNU6-258P-201ENST00000390884 101 ntBASIC-1□□□□□ -2.57
ATG4AQ8WYN0 RNU6-706P-201ENST00000517229 104 ntBASIC-1□□□□□ -2.57
ATG4AQ8WYN0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
ATG4AQ8WYN0 SNORA27.2-201ENST00000363365 126 ntBASIC-1.02□□□□□ -2.57
ATG4AQ8WYN0 RNU6-829P-201ENST00000363700 112 ntBASIC-1.02□□□□□ -2.57
ATG4AQ8WYN0 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.03□□□□□ -2.57
ATG4AQ8WYN0 AC090616.4-201ENST00000448026 115 ntBASIC-1.03□□□□□ -2.57
ATG4AQ8WYN0 RNU6-499P-201ENST00000365615 107 ntBASIC-1.04□□□□□ -2.58
ATG4AQ8WYN0 HLA-S-202ENST00000425174 53 ntBASIC-1.04□□□□□ -2.58
ATG4AQ8WYN0 AC079150.2-201ENST00000443733 78 ntBASIC-1.04□□□□□ -2.58
ATG4AQ8WYN0 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.04□□□□□ -2.58
ATG4AQ8WYN0 RNU6-974P-201ENST00000384099 108 ntBASIC-1.05□□□□□ -2.58
ATG4AQ8WYN0 MIR1468-201ENST00000410600 86 ntBASIC-1.05□□□□□ -2.58
ATG4AQ8WYN0 MIR23C-201ENST00000579846 100 ntBASIC-1.05□□□□□ -2.58
ATG4AQ8WYN0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.06□□□□□ -2.58
ATG4AQ8WYN0 MIR5591-201ENST00000578248 65 ntBASIC-1.07□□□□□ -2.58
ATG4AQ8WYN0 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.08□□□□□ -2.58
ATG4AQ8WYN0 MIR601-201ENST00000385256 79 ntBASIC-1.09□□□□□ -2.58
ATG4AQ8WYN0 AL451105.1-201ENST00000450005 189 ntBASIC-1.1□□□□□ -2.59
ATG4AQ8WYN0 RNU6-419P-201ENST00000517030 63 ntBASIC-1.1□□□□□ -2.59
ATG4AQ8WYN0 MIR4520-1-201ENST00000582609 70 ntBASIC-1.1□□□□□ -2.59
ATG4AQ8WYN0 AC138207.3-201ENST00000585289 166 ntBASIC-1.1□□□□□ -2.59
ATG4AQ8WYN0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.11□□□□□ -2.59
ATG4AQ8WYN0 SNORD113-4-201ENST00000364802 75 ntBASIC-1.11□□□□□ -2.59
ATG4AQ8WYN0 RNU6-576P-201ENST00000390854 102 ntBASIC-1.11□□□□□ -2.59
ATG4AQ8WYN0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.12□□□□□ -2.59
ATG4AQ8WYN0 SNORD45.2-201ENST00000363552 72 ntBASIC-1.13□□□□□ -2.59
ATG4AQ8WYN0 MIR1246-201ENST00000636535 73 ntBASIC-1.13□□□□□ -2.59
ATG4AQ8WYN0 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.14□□□□□ -2.59
ATG4AQ8WYN0 RNA5SP180-201ENST00000516181 101 ntBASIC-1.14□□□□□ -2.59
ATG4AQ8WYN0 MIR548X-201ENST00000580069 75 ntBASIC-1.14□□□□□ -2.59
ATG4AQ8WYN0 AC018880.2-201ENST00000414265 201 ntBASIC-1.15□□□□□ -2.59
ATG4AQ8WYN0 MIR198-201ENST00000637333 62 ntBASIC-1.15□□□□□ -2.59
ATG4AQ8WYN0 MIR6502-201ENST00000617296 76 ntBASIC-1.16□□□□□ -2.6
ATG4AQ8WYN0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.16□□□□□ -2.6
ATG4AQ8WYN0 MIR1285-2-201ENST00000408311 88 ntBASIC-1.18□□□□□ -2.6
ATG4AQ8WYN0 MIR4770-201ENST00000579149 58 ntBASIC-1.18□□□□□ -2.6
ATG4AQ8WYN0 AC091912.2-201ENST00000624798 167 ntBASIC-1.19□□□□□ -2.6
ATG4AQ8WYN0 MIR6874-201ENST00000635894 71 ntBASIC-1.19□□□□□ -2.6
ATG4AQ8WYN0 MIR365A-201ENST00000362260 87 ntBASIC-1.21□□□□□ -2.6
ATG4AQ8WYN0 RNY3P8-201ENST00000411366 126 ntBASIC-1.21□□□□□ -2.6
ATG4AQ8WYN0 U4.2-201ENST00000618561 85 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 242.3 ms