Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD115-31-201ENST00000365318 82 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 AC044792.1-201ENST00000593294 196 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-497P-201ENST00000365316 104 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-810P-201ENST00000364001 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-974P-201ENST00000384099 108 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD60-201ENST00000383903 83 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD116.2-201ENST00000391251 93 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-590P-201ENST00000365039 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-315P-201ENST00000362666 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 AP001318.4-201ENST00000616637 121 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD18C-201ENST00000362704 69 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 MIR569-201ENST00000385228 96 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-345P-201ENST00000517001 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 AL031737.1-201ENST00000450125 223 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 RNU6-22P-201ENST00000384355 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORA63.4-201ENST00000362763 126 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-327P-201ENST00000516270 127 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORD63.2-201ENST00000516303 64 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AC013734.1-201ENST00000619329 111 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 MIR4317-201ENST00000637586 65 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-330P-201ENST00000363015 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 MIR548N-201ENST00000408742 75 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORD113-3-201ENST00000364830 72 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU7-119P-201ENST00000459279 63 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-219P-201ENST00000364728 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AL731768.1-201ENST00000603124 139 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNY1P5-201ENST00000383890 115 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 SNORA40B-201ENST00000385573 128 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-162P-201ENST00000516228 103 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-267P-201ENST00000516714 103 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-176P-201ENST00000517196 105 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-886P-201ENST00000384319 105 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-520P-201ENST00000384717 104 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU7-151P-201ENST00000516930 53 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 MIR4426-201ENST00000640330 63 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-663P-201ENST00000391105 106 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNY3P8-201ENST00000411366 126 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-589P-201ENST00000516485 107 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-979P-201ENST00000383896 107 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SNORA17.4-201ENST00000391287 132 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SNORD60.1-201ENST00000362451 73 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 MIR581-201ENST00000384895 96 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 MIR7978-201ENST00000636158 59 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-172P-201ENST00000411000 93 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-822P-201ENST00000362707 106 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU7-171P-201ENST00000459581 62 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 AC008267.6-201ENST00000441664 139 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 SNORD45.2-201ENST00000363552 72 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-737P-201ENST00000365370 107 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-255P-201ENST00000516957 105 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 SNORD114-13-201ENST00000364377 74 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 MIR548AI-201ENST00000579940 88 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-640P-201ENST00000363693 105 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-196P-201ENST00000384315 107 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-257P-201ENST00000410238 98 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 MIR154-201ENST00000385243 84 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-912P-201ENST00000363800 104 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNY4P13-201ENST00000384284 96 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-70P-201ENST00000516438 60 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-411P-201ENST00000384451 107 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 SNORD45A-201ENST00000384512 84 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR363-201ENST00000384840 75 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR4503-201ENST00000582187 83 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR664A-201ENST00000626086 82 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 MIR450A1-201ENST00000362262 91 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-147P-201ENST00000383983 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-419P-201ENST00000517030 63 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 MIR548BB-201ENST00000626714 66 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-854P-201ENST00000364036 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms