Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.78□□□□□ -2.69
PRPF39Q86UA1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.78□□□□□ -2.69
PRPF39Q86UA1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.78□□□□□ -2.69
PRPF39Q86UA1 U6.97-201ENST00000636904 101 ntBASIC-1.78□□□□□ -2.69
PRPF39Q86UA1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.79□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.79□□□□□ -2.7
PRPF39Q86UA1 RNU6-153P-201ENST00000364422 104 ntBASIC-1.79□□□□□ -2.7
PRPF39Q86UA1 MIR3123-201ENST00000583417 75 ntBASIC-1.79□□□□□ -2.7
PRPF39Q86UA1 SNORD60.1-201ENST00000362451 73 ntBASIC-1.8□□□□□ -2.7
PRPF39Q86UA1 RNU6-294P-201ENST00000364999 102 ntBASIC-1.8□□□□□ -2.7
PRPF39Q86UA1 MIR450A2-201ENST00000385022 100 ntBASIC-1.8□□□□□ -2.7
PRPF39Q86UA1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.8□□□□□ -2.7
PRPF39Q86UA1 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.8□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.81□□□□□ -2.7
PRPF39Q86UA1 RNU6-406P-201ENST00000516470 107 ntBASIC-1.81□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.82□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.83□□□□□ -2.7
PRPF39Q86UA1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.83□□□□□ -2.7
PRPF39Q86UA1 RNU6-810P-201ENST00000364001 107 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 AC062037.1-201ENST00000605302 128 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.84□□□□□ -2.7
PRPF39Q86UA1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.85□□□□□ -2.71
PRPF39Q86UA1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.85□□□□□ -2.71
PRPF39Q86UA1 RNU6-411P-201ENST00000384451 107 ntBASIC-1.85□□□□□ -2.71
PRPF39Q86UA1 MIR5582-201ENST00000579697 68 ntBASIC-1.85□□□□□ -2.71
PRPF39Q86UA1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.86□□□□□ -2.71
PRPF39Q86UA1 RNU6-231P-201ENST00000517122 103 ntBASIC-1.86□□□□□ -2.71
PRPF39Q86UA1 MIR7110-201ENST00000612638 86 ntBASIC-1.86□□□□□ -2.71
PRPF39Q86UA1 U4.2-201ENST00000618561 85 ntBASIC-1.86□□□□□ -2.71
PRPF39Q86UA1 U2.22-201ENST00000636441 106 ntBASIC-1.86□□□□□ -2.71
PRPF39Q86UA1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.87□□□□□ -2.71
PRPF39Q86UA1 SNORD116.2-201ENST00000391251 93 ntBASIC-1.88□□□□□ -2.71
PRPF39Q86UA1 MIR548AM-201ENST00000584298 74 ntBASIC-1.88□□□□□ -2.71
PRPF39Q86UA1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.89□□□□□ -2.71
PRPF39Q86UA1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.89□□□□□ -2.71
PRPF39Q86UA1 AC108019.1-201ENST00000512540 175 ntBASIC-1.89□□□□□ -2.71
PRPF39Q86UA1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.9□□□□□ -2.71
PRPF39Q86UA1 RNU6-663P-201ENST00000391105 106 ntBASIC-1.9□□□□□ -2.71
PRPF39Q86UA1 RNU6-634P-201ENST00000459134 106 ntBASIC-1.9□□□□□ -2.71
PRPF39Q86UA1 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.9□□□□□ -2.71
PRPF39Q86UA1 U7.4-201ENST00000614961 63 ntBASIC-1.9□□□□□ -2.71
PRPF39Q86UA1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.91□□□□□ -2.72
PRPF39Q86UA1 MIR581-201ENST00000384895 96 ntBASIC-1.91□□□□□ -2.72
PRPF39Q86UA1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.91□□□□□ -2.72
PRPF39Q86UA1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.91□□□□□ -2.72
PRPF39Q86UA1 MIR4756-201ENST00000577874 78 ntBASIC-1.91□□□□□ -2.72
PRPF39Q86UA1 MIR365A-201ENST00000362260 87 ntBASIC-1.92□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.92□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.92□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.92□□□□□ -2.72
PRPF39Q86UA1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.92□□□□□ -2.72
PRPF39Q86UA1 MIR202-201ENST00000362219 110 ntBASIC-1.93□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.93□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.93□□□□□ -2.72
PRPF39Q86UA1 RNU6-820P-201ENST00000384273 107 ntBASIC-1.93□□□□□ -2.72
PRPF39Q86UA1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.94□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.94□□□□□ -2.72
PRPF39Q86UA1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.95□□□□□ -2.72
PRPF39Q86UA1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.95□□□□□ -2.72
PRPF39Q86UA1 snoU13.10-201ENST00000459301 103 ntBASIC-1.95□□□□□ -2.72
PRPF39Q86UA1 MIR1246-201ENST00000636535 73 ntBASIC-1.95□□□□□ -2.72
PRPF39Q86UA1 SNORA25.5-201ENST00000363782 126 ntBASIC-1.96□□□□□ -2.72
PRPF39Q86UA1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.96□□□□□ -2.72
PRPF39Q86UA1 SNORA40.16-201ENST00000517238 121 ntBASIC-1.96□□□□□ -2.72
PRPF39Q86UA1 MIR548W-201ENST00000581970 74 ntBASIC-1.96□□□□□ -2.72
PRPF39Q86UA1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.97□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.97□□□□□ -2.72
PRPF39Q86UA1 SNORA40B-201ENST00000385573 128 ntBASIC-1.97□□□□□ -2.72
PRPF39Q86UA1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.97□□□□□ -2.72
PRPF39Q86UA1 RNU6-122P-201ENST00000516818 107 ntBASIC-1.97□□□□□ -2.72
PRPF39Q86UA1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.98□□□□□ -2.73
PRPF39Q86UA1 SNORD30.1-201ENST00000391309 70 ntBASIC-1.98□□□□□ -2.73
PRPF39Q86UA1 RNU6-573P-201ENST00000383938 106 ntBASIC-1.99□□□□□ -2.73
PRPF39Q86UA1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.99□□□□□ -2.73
PRPF39Q86UA1 MIR4441-201ENST00000582623 100 ntBASIC-1.99□□□□□ -2.73
PRPF39Q86UA1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.99□□□□□ -2.73
PRPF39Q86UA1 SNORA25.4-201ENST00000363666 124 ntBASIC-2□□□□□ -2.73
PRPF39Q86UA1 MIR1207-201ENST00000408249 87 ntBASIC-2□□□□□ -2.73
PRPF39Q86UA1 SNORD18C-201ENST00000362704 69 ntBASIC-2.01□□□□□ -2.73
PRPF39Q86UA1 RNU6-980P-201ENST00000516925 103 ntBASIC-2.01□□□□□ -2.73
PRPF39Q86UA1 RNU6-530P-201ENST00000391180 107 ntBASIC-2.02□□□□□ -2.73
PRPF39Q86UA1 SNORD73B-201ENST00000364394 72 ntBASIC-2.03□□□□□ -2.73
PRPF39Q86UA1 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.03□□□□□ -2.73
PRPF39Q86UA1 MIR1255A-201ENST00000408338 113 ntBASIC-2.03□□□□□ -2.73
PRPF39Q86UA1 MIR548N-201ENST00000408742 75 ntBASIC-2.03□□□□□ -2.73
PRPF39Q86UA1 SNORD60-201ENST00000383903 83 ntBASIC-2.04□□□□□ -2.74
PRPF39Q86UA1 SNORA17.4-201ENST00000391287 132 ntBASIC-2.04□□□□□ -2.74
PRPF39Q86UA1 MIR664B-201ENST00000626756 61 ntBASIC-2.04□□□□□ -2.74
PRPF39Q86UA1 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.05□□□□□ -2.74
PRPF39Q86UA1 RNU6-857P-201ENST00000515893 110 ntBASIC-2.05□□□□□ -2.74
PRPF39Q86UA1 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.06□□□□□ -2.74
PRPF39Q86UA1 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.06□□□□□ -2.74
PRPF39Q86UA1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.06□□□□□ -2.74
PRPF39Q86UA1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.06□□□□□ -2.74
PRPF39Q86UA1 U6.111-201ENST00000636093 83 ntBASIC-2.06□□□□□ -2.74
PRPF39Q86UA1 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms