Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MIR548H4-201ENST00000408689 111 ntBASIC-2.43□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 RNU6-797P-201ENST00000363101 109 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 MIR590-201ENST00000385008 97 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 RNU6-426P-201ENST00000516464 97 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 RNU6-267P-201ENST00000516714 103 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 RNU6-231P-201ENST00000517122 103 ntBASIC-2.44□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.45□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.45□□□□□ -2.8
CSPG4Q6UVK1 AC139792.2-201ENST00000624218 587 ntBASIC-2.45□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 RNU6-497P-201ENST00000365316 104 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 SNORD45C-201ENST00000383893 79 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 RNU6-474P-201ENST00000384243 107 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.46□□□□□ -2.8
CSPG4Q6UVK1 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.47□□□□□ -2.8
CSPG4Q6UVK1 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.47□□□□□ -2.8
CSPG4Q6UVK1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.47□□□□□ -2.8
CSPG4Q6UVK1 AL451105.1-201ENST00000450005 189 ntBASIC-2.47□□□□□ -2.8
CSPG4Q6UVK1 MIR363-201ENST00000384840 75 ntBASIC-2.48□□□□□ -2.81
CSPG4Q6UVK1 MIR3171-201ENST00000584270 74 ntBASIC-2.48□□□□□ -2.81
CSPG4Q6UVK1 AL353621.2-201ENST00000605340 133 ntBASIC-2.48□□□□□ -2.81
CSPG4Q6UVK1 AL157777.2-201ENST00000258070 137 ntBASIC-2.49□□□□□ -2.81
CSPG4Q6UVK1 MTND4LP9-201ENST00000427694 174 ntBASIC-2.49□□□□□ -2.81
CSPG4Q6UVK1 MIR4484-201ENST00000582855 83 ntBASIC-2.49□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.5□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.5□□□□□ -2.81
CSPG4Q6UVK1 U6.95-201ENST00000636931 70 ntBASIC-2.5□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.51□□□□□ -2.81
CSPG4Q6UVK1 RNU6-895P-201ENST00000384125 103 ntBASIC-2.51□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.51□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.51□□□□□ -2.81
CSPG4Q6UVK1 SNORD116-24-201ENST00000384549 92 ntBASIC-2.51□□□□□ -2.81
CSPG4Q6UVK1 RNU6-315P-201ENST00000362666 107 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 MTND4P29-201ENST00000503122 1372 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 MIR3938-201ENST00000582157 103 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 MIR4760-201ENST00000585040 80 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 RNU6-875P-201ENST00000516488 106 ntBASIC-2.52□□□□□ -2.81
CSPG4Q6UVK1 SNORA63.4-201ENST00000362763 126 ntBASIC-2.53□□□□□ -2.81
CSPG4Q6UVK1 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.53□□□□□ -2.81
CSPG4Q6UVK1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.53□□□□□ -2.81
CSPG4Q6UVK1 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.53□□□□□ -2.82
CSPG4Q6UVK1 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.53□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.53□□□□□ -2.82
CSPG4Q6UVK1 MIR548X-201ENST00000580069 75 ntBASIC-2.53□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.54□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.54□□□□□ -2.82
CSPG4Q6UVK1 SNORA40-201ENST00000388090 126 ntBASIC-2.54□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.54□□□□□ -2.82
CSPG4Q6UVK1 RNU6-411P-201ENST00000384451 107 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 RNU6-663P-201ENST00000391105 106 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 AC139453.2-201ENST00000487255 133 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 MIR3128-201ENST00000581957 66 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 MIR4795-201ENST00000584182 89 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 MIR548AH-201ENST00000637109 76 ntBASIC-2.55□□□□□ -2.82
CSPG4Q6UVK1 RNU6-111P-201ENST00000517179 105 ntBASIC-2.56□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.56□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.56□□□□□ -2.82
CSPG4Q6UVK1 RNU6-623P-201ENST00000363143 105 ntBASIC-2.57□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.57□□□□□ -2.82
CSPG4Q6UVK1 MT-TD-201ENST00000387419 68 ntBASIC-2.57□□□□□ -2.82
CSPG4Q6UVK1 SNORD115.2-201ENST00000391126 59 ntBASIC-2.57□□□□□ -2.82
CSPG4Q6UVK1 SNORA40.13-201ENST00000516379 120 ntBASIC-2.57□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 SNORD116-21-201ENST00000384507 92 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 MIR3914-2-201ENST00000637339 95 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 RNU6-979P-201ENST00000383896 107 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 RNU6-788P-201ENST00000390967 104 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 AC004792.1-201ENST00000614523 137 ntBASIC-2.58□□□□□ -2.82
CSPG4Q6UVK1 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.59□□□□□ -2.82
CSPG4Q6UVK1 MIR4801-201ENST00000582704 82 ntBASIC-2.59□□□□□ -2.82
CSPG4Q6UVK1 MIR548BB-201ENST00000626714 66 ntBASIC-2.59□□□□□ -2.82
CSPG4Q6UVK1 RNU6-379P-201ENST00000363813 104 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 RNU6-675P-201ENST00000384236 104 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 MIR545-201ENST00000385085 106 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 MIR569-201ENST00000385228 96 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 RNU6-380P-201ENST00000410207 107 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 RNU6-659P-201ENST00000516454 104 ntBASIC-2.6□□□□□ -2.83
CSPG4Q6UVK1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.61□□□□□ -2.83
CSPG4Q6UVK1 RNU6-419P-201ENST00000517030 63 ntBASIC-2.61□□□□□ -2.83
CSPG4Q6UVK1 RNU6-776P-201ENST00000364403 104 ntBASIC-2.62□□□□□ -2.83
CSPG4Q6UVK1 RNU6-219P-201ENST00000364728 107 ntBASIC-2.62□□□□□ -2.83
CSPG4Q6UVK1 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.62□□□□□ -2.83
CSPG4Q6UVK1 RNU6-394P-201ENST00000410735 107 ntBASIC-2.62□□□□□ -2.83
CSPG4Q6UVK1 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 AL589823.1-201ENST00000429577 183 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 RNU6-109P-201ENST00000516364 107 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 RNU6-184P-201ENST00000516514 107 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 RNU6-422P-201ENST00000384632 107 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 MIR548AL-201ENST00000578416 97 ntBASIC-2.63□□□□□ -2.83
CSPG4Q6UVK1 SNORA20.1-201ENST00000364790 130 ntBASIC-2.64□□□□□ -2.83
CSPG4Q6UVK1 RNU6-808P-201ENST00000391233 108 ntBASIC-2.64□□□□□ -2.83
CSPG4Q6UVK1 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.64□□□□□ -2.83
CSPG4Q6UVK1 MTND5P20-201ENST00000448677 143 ntBASIC-2.65□□□□□ -2.83
CSPG4Q6UVK1 SNORA25.4-201ENST00000363666 124 ntBASIC-2.65□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms