Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 U2.18-201ENST00000622185 84 ntBASIC-0.93□□□□□ -2.56
ZNF394Q53GI3 MIR147A-201ENST00000385079 72 ntBASIC-0.94□□□□□ -2.56
ZNF394Q53GI3 RNU6-995P-201ENST00000391244 107 ntBASIC-0.94□□□□□ -2.56
ZNF394Q53GI3 MIR4324-201ENST00000584846 72 ntBASIC-0.94□□□□□ -2.56
ZNF394Q53GI3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.94□□□□□ -2.56
ZNF394Q53GI3 MIR382-201ENST00000637119 76 ntBASIC-0.95□□□□□ -2.56
ZNF394Q53GI3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.96□□□□□ -2.56
ZNF394Q53GI3 RNU6-520P-201ENST00000384717 104 ntBASIC-0.98□□□□□ -2.57
ZNF394Q53GI3 MIR548Q-201ENST00000408404 100 ntBASIC-0.98□□□□□ -2.57
ZNF394Q53GI3 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
ZNF394Q53GI3 RNU6-788P-201ENST00000390967 104 ntBASIC-0.99□□□□□ -2.57
ZNF394Q53GI3 SNORD19-201ENST00000391191 68 ntBASIC-0.99□□□□□ -2.57
ZNF394Q53GI3 MIR4320-201ENST00000636981 65 ntBASIC-0.99□□□□□ -2.57
ZNF394Q53GI3 RNU7-160P-201ENST00000516660 62 ntBASIC-1□□□□□ -2.57
ZNF394Q53GI3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.01□□□□□ -2.57
ZNF394Q53GI3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.01□□□□□ -2.57
ZNF394Q53GI3 MIR4490-201ENST00000582647 84 ntBASIC-1.01□□□□□ -2.57
ZNF394Q53GI3 MIR5683-201ENST00000636514 76 ntBASIC-1.01□□□□□ -2.57
ZNF394Q53GI3 RNU7-151P-201ENST00000516930 53 ntBASIC-1.03□□□□□ -2.57
ZNF394Q53GI3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.03□□□□□ -2.57
ZNF394Q53GI3 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.04□□□□□ -2.58
ZNF394Q53GI3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.05□□□□□ -2.58
ZNF394Q53GI3 SNORD116.2-201ENST00000391251 93 ntBASIC-1.05□□□□□ -2.58
ZNF394Q53GI3 MIR1468-201ENST00000410600 86 ntBASIC-1.06□□□□□ -2.58
ZNF394Q53GI3 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
ZNF394Q53GI3 SNORA40B-201ENST00000385573 128 ntBASIC-1.09□□□□□ -2.58
ZNF394Q53GI3 MIR7978-201ENST00000636158 59 ntBASIC-1.09□□□□□ -2.58
ZNF394Q53GI3 MIR601-201ENST00000385256 79 ntBASIC-1.1□□□□□ -2.59
ZNF394Q53GI3 MIR3170-201ENST00000582699 77 ntBASIC-1.1□□□□□ -2.59
ZNF394Q53GI3 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.12□□□□□ -2.59
ZNF394Q53GI3 RNU6-810P-201ENST00000364001 107 ntBASIC-1.12□□□□□ -2.59
ZNF394Q53GI3 MIR579-201ENST00000385221 98 ntBASIC-1.12□□□□□ -2.59
ZNF394Q53GI3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.12□□□□□ -2.59
ZNF394Q53GI3 RNU6-247P-201ENST00000362636 107 ntBASIC-1.13□□□□□ -2.59
ZNF394Q53GI3 MIR125B1-201ENST00000385236 88 ntBASIC-1.13□□□□□ -2.59
ZNF394Q53GI3 MIR3115-201ENST00000577915 68 ntBASIC-1.13□□□□□ -2.59
ZNF394Q53GI3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.14□□□□□ -2.59
ZNF394Q53GI3 AP002795.1-201ENST00000534879 84 ntBASIC-1.14□□□□□ -2.59
ZNF394Q53GI3 MIR3165-201ENST00000579874 75 ntBASIC-1.14□□□□□ -2.59
ZNF394Q53GI3 MIR198-201ENST00000637333 62 ntBASIC-1.15□□□□□ -2.59
ZNF394Q53GI3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.16□□□□□ -2.6
ZNF394Q53GI3 SNORA40.16-201ENST00000517238 121 ntBASIC-1.16□□□□□ -2.6
ZNF394Q53GI3 RNU6-828P-201ENST00000364876 107 ntBASIC-1.17□□□□□ -2.6
ZNF394Q53GI3 MIR507-201ENST00000385234 94 ntBASIC-1.17□□□□□ -2.6
ZNF394Q53GI3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.17□□□□□ -2.6
ZNF394Q53GI3 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.18□□□□□ -2.6
ZNF394Q53GI3 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
ZNF394Q53GI3 MIR6818-201ENST00000621576 65 ntBASIC-1.18□□□□□ -2.6
ZNF394Q53GI3 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.19□□□□□ -2.6
ZNF394Q53GI3 MIR29B1-201ENST00000385015 81 ntBASIC-1.19□□□□□ -2.6
ZNF394Q53GI3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.19□□□□□ -2.6
ZNF394Q53GI3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.2□□□□□ -2.6
ZNF394Q53GI3 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.21□□□□□ -2.6
ZNF394Q53GI3 AC138207.3-201ENST00000585289 166 ntBASIC-1.21□□□□□ -2.6
ZNF394Q53GI3 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.22□□□□□ -2.6
ZNF394Q53GI3 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
ZNF394Q53GI3 U4.2-201ENST00000618561 85 ntBASIC-1.22□□□□□ -2.6
ZNF394Q53GI3 MIR520D-201ENST00000385002 87 ntBASIC-1.23□□□□□ -2.61
ZNF394Q53GI3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.23□□□□□ -2.61
ZNF394Q53GI3 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.23□□□□□ -2.61
ZNF394Q53GI3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.25□□□□□ -2.61
ZNF394Q53GI3 SNORD63.2-201ENST00000516303 64 ntBASIC-1.25□□□□□ -2.61
ZNF394Q53GI3 MIR23C-201ENST00000579846 100 ntBASIC-1.25□□□□□ -2.61
ZNF394Q53GI3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.25□□□□□ -2.61
ZNF394Q53GI3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.26□□□□□ -2.61
ZNF394Q53GI3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.26□□□□□ -2.61
ZNF394Q53GI3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.26□□□□□ -2.61
ZNF394Q53GI3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.26□□□□□ -2.61
ZNF394Q53GI3 RNU6-499P-201ENST00000365615 107 ntBASIC-1.27□□□□□ -2.61
ZNF394Q53GI3 HLA-S-202ENST00000425174 53 ntBASIC-1.27□□□□□ -2.61
ZNF394Q53GI3 AC091912.2-201ENST00000624798 167 ntBASIC-1.27□□□□□ -2.61
ZNF394Q53GI3 MIR365A-201ENST00000362260 87 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 SNORA27.2-201ENST00000363365 126 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 MIR633-201ENST00000384821 98 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 MIR6874-201ENST00000635894 71 ntBASIC-1.28□□□□□ -2.61
ZNF394Q53GI3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.29□□□□□ -2.62
ZNF394Q53GI3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.29□□□□□ -2.62
ZNF394Q53GI3 RNU6-446P-201ENST00000362827 106 ntBASIC-1.3□□□□□ -2.62
ZNF394Q53GI3 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.3□□□□□ -2.62
ZNF394Q53GI3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.3□□□□□ -2.62
ZNF394Q53GI3 MIR5591-201ENST00000578248 65 ntBASIC-1.3□□□□□ -2.62
ZNF394Q53GI3 AC079150.2-201ENST00000443733 78 ntBASIC-1.31□□□□□ -2.62
ZNF394Q53GI3 RNU6-829P-201ENST00000363700 112 ntBASIC-1.32□□□□□ -2.62
ZNF394Q53GI3 SNORD45.2-201ENST00000363552 72 ntBASIC-1.33□□□□□ -2.62
ZNF394Q53GI3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
ZNF394Q53GI3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.33□□□□□ -2.62
ZNF394Q53GI3 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
ZNF394Q53GI3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.34□□□□□ -2.62
ZNF394Q53GI3 AC090616.4-201ENST00000448026 115 ntBASIC-1.34□□□□□ -2.62
ZNF394Q53GI3 MIR4770-201ENST00000579149 58 ntBASIC-1.34□□□□□ -2.62
ZNF394Q53GI3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.35□□□□□ -2.63
ZNF394Q53GI3 MIR6502-201ENST00000617296 76 ntBASIC-1.35□□□□□ -2.63
ZNF394Q53GI3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.36□□□□□ -2.63
ZNF394Q53GI3 MIR1207-201ENST00000408249 87 ntBASIC-1.37□□□□□ -2.63
ZNF394Q53GI3 RNU6-419P-201ENST00000517030 63 ntBASIC-1.37□□□□□ -2.63
ZNF394Q53GI3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.39□□□□□ -2.63
ZNF394Q53GI3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.39□□□□□ -2.63
ZNF394Q53GI3 AL451105.1-201ENST00000450005 189 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms