Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU6-406P-201ENST00000516470 107 ntBASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 MIR3123-201ENST00000583417 75 ntBASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 AC062037.1-201ENST00000605302 128 ntBASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 RNU6-228P-201ENST00000362700 106 ntBASIC-0.99□□□□□ -2.57
TNFRSF9Q07011 SNORA27.2-201ENST00000363365 126 ntBASIC-0.99□□□□□ -2.57
TNFRSF9Q07011 RNA5SP173-201ENST00000364857 136 ntBASIC-0.99□□□□□ -2.57
TNFRSF9Q07011 RNU6-92P-201ENST00000605893 104 ntBASIC-0.99□□□□□ -2.57
TNFRSF9Q07011 U2.22-201ENST00000636441 106 ntBASIC-0.99□□□□□ -2.57
TNFRSF9Q07011 RNU6-810P-201ENST00000364001 107 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 RNU6-294P-201ENST00000364999 102 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.442-201ENST00000384131 102 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 MIR581-201ENST00000384895 96 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 MIR450A2-201ENST00000385022 100 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 RNU6-995P-201ENST00000391244 107 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 RNU6-542P-201ENST00000516405 103 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 MIR23C-201ENST00000579846 100 ntBASIC-1□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.01□□□□□ -2.57
TNFRSF9Q07011 MIR5582-201ENST00000579697 68 ntBASIC-1.01□□□□□ -2.57
TNFRSF9Q07011 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.01□□□□□ -2.57
TNFRSF9Q07011 SNORD18.1-201ENST00000363807 70 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 RNU6-242P-201ENST00000384359 107 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 MIR1468-201ENST00000410600 86 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 AC108019.1-201ENST00000512540 175 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 RNU6-231P-201ENST00000517122 103 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 MIR4756-201ENST00000577874 78 ntBASIC-1.02□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.03□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.03□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 RNU6-411P-201ENST00000384451 107 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 SNORD116.2-201ENST00000391251 93 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 MIR548W-201ENST00000581970 74 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 MIR548AM-201ENST00000584298 74 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 MIR7110-201ENST00000612638 86 ntBASIC-1.04□□□□□ -2.58
TNFRSF9Q07011 RNU6-841P-201ENST00000383872 107 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 RNU6-573P-201ENST00000383938 106 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 RNU6-663P-201ENST00000391105 106 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 RNU6-634P-201ENST00000459134 106 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 SNORA40.16-201ENST00000517238 121 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 U7.4-201ENST00000614961 63 ntBASIC-1.05□□□□□ -2.58
TNFRSF9Q07011 MIR202-201ENST00000362219 110 ntBASIC-1.06□□□□□ -2.58
TNFRSF9Q07011 RNU6-520P-201ENST00000384717 104 ntBASIC-1.06□□□□□ -2.58
TNFRSF9Q07011 RNU4-88P-201ENST00000411220 86 ntBASIC-1.06□□□□□ -2.58
TNFRSF9Q07011 snoU13.10-201ENST00000459301 103 ntBASIC-1.06□□□□□ -2.58
TNFRSF9Q07011 MIR1246-201ENST00000636535 73 ntBASIC-1.06□□□□□ -2.58
TNFRSF9Q07011 SNORA25.5-201ENST00000363782 126 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.07□□□□□ -2.58
TNFRSF9Q07011 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 RNU6-820P-201ENST00000384273 107 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 MIR601-201ENST00000385256 79 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 RNU7-160P-201ENST00000516660 62 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 RNU6-122P-201ENST00000516818 107 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.08□□□□□ -2.58
TNFRSF9Q07011 SNORD73B-201ENST00000364394 72 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 RNU6-649P-201ENST00000384463 107 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 SNORA40B-201ENST00000385573 128 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 RNU6-983P-201ENST00000516004 103 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.09□□□□□ -2.58
TNFRSF9Q07011 RNU6-828P-201ENST00000364876 107 ntBASIC-1.1□□□□□ -2.59
TNFRSF9Q07011 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.1□□□□□ -2.59
TNFRSF9Q07011 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.1□□□□□ -2.59
TNFRSF9Q07011 MIR1255A-201ENST00000408338 113 ntBASIC-1.1□□□□□ -2.59
TNFRSF9Q07011 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 RNU6-530P-201ENST00000391180 107 ntBASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 SNORD30.1-201ENST00000391309 70 ntBASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 MIR548N-201ENST00000408742 75 ntBASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 RNU6-980P-201ENST00000516925 103 ntBASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.11□□□□□ -2.59
TNFRSF9Q07011 SNORA25.4-201ENST00000363666 124 ntBASIC-1.12□□□□□ -2.59
TNFRSF9Q07011 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.12□□□□□ -2.59
TNFRSF9Q07011 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.12□□□□□ -2.59
TNFRSF9Q07011 RNU6-857P-201ENST00000515893 110 ntBASIC-1.12□□□□□ -2.59
TNFRSF9Q07011 MIR664B-201ENST00000626756 61 ntBASIC-1.12□□□□□ -2.59
TNFRSF9Q07011 SNORA17.4-201ENST00000391287 132 ntBASIC-1.13□□□□□ -2.59
TNFRSF9Q07011 RNA5SP225-201ENST00000410874 135 ntBASIC-1.13□□□□□ -2.59
TNFRSF9Q07011 RNU6-68P-201ENST00000516576 104 ntBASIC-1.13□□□□□ -2.59
TNFRSF9Q07011 SNORD18C-201ENST00000362704 69 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 RNU6-361P-201ENST00000364454 107 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 RNA5SP180-201ENST00000516181 101 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 MIR4511-201ENST00000582784 87 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 U6.111-201ENST00000636093 83 ntBASIC-1.14□□□□□ -2.59
TNFRSF9Q07011 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.15□□□□□ -2.59
TNFRSF9Q07011 SNORD60-201ENST00000383903 83 ntBASIC-1.15□□□□□ -2.59
TNFRSF9Q07011 RNY4P29-201ENST00000410801 97 ntBASIC-1.15□□□□□ -2.59
TNFRSF9Q07011 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.15□□□□□ -2.59
TNFRSF9Q07011 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.16□□□□□ -2.6
TNFRSF9Q07011 RNU6-742P-201ENST00000365289 107 ntBASIC-1.16□□□□□ -2.6
TNFRSF9Q07011 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.16□□□□□ -2.6
TNFRSF9Q07011 RNU6-279P-201ENST00000391297 101 ntBASIC-1.16□□□□□ -2.6
TNFRSF9Q07011 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms