Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.51□□□□□ -2.97
SDC4P31431 SNORD60.1-201ENST00000362451 73 ntBASIC-3.52□□□□□ -2.97
SDC4P31431 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.52□□□□□ -2.97
SDC4P31431 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.52□□□□□ -2.97
SDC4P31431 RNU6-300P-201ENST00000459080 104 ntBASIC-3.52□□□□□ -2.97
SDC4P31431 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.53□□□□□ -2.97
SDC4P31431 MIR548AI-201ENST00000579940 88 ntBASIC-3.53□□□□□ -2.97
SDC4P31431 AL731768.1-201ENST00000603124 139 ntBASIC-3.53□□□□□ -2.97
SDC4P31431 RNY4P7-201ENST00000364600 96 ntBASIC-3.54□□□□□ -2.98
SDC4P31431 RNU6-200P-201ENST00000364743 107 ntBASIC-3.54□□□□□ -2.98
SDC4P31431 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.54□□□□□ -2.98
SDC4P31431 MIR1302-3-201ENST00000408128 138 ntBASIC-3.54□□□□□ -2.98
SDC4P31431 MIR606-201ENST00000384851 96 ntBASIC-3.55□□□□□ -2.98
SDC4P31431 RNY4P25-201ENST00000459254 96 ntBASIC-3.55□□□□□ -2.98
SDC4P31431 RNU6-907P-201ENST00000390924 102 ntBASIC-3.56□□□□□ -2.98
SDC4P31431 SNORA40B-201ENST00000385573 128 ntBASIC-3.57□□□□□ -2.98
SDC4P31431 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.59□□□□□ -2.98
SDC4P31431 RNU6-895P-201ENST00000384125 103 ntBASIC-3.59□□□□□ -2.98
SDC4P31431 RNU6-380P-201ENST00000410207 107 ntBASIC-3.59□□□□□ -2.98
SDC4P31431 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.59□□□□□ -2.98
SDC4P31431 RNU6-542P-201ENST00000516405 103 ntBASIC-3.59□□□□□ -2.98
SDC4P31431 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.6□□□□□ -2.99
SDC4P31431 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.6□□□□□ -2.99
SDC4P31431 RNU6-867P-201ENST00000364956 107 ntBASIC-3.61□□□□□ -2.99
SDC4P31431 AL451105.1-201ENST00000450005 189 ntBASIC-3.61□□□□□ -2.99
SDC4P31431 SNORA40.16-201ENST00000517238 121 ntBASIC-3.61□□□□□ -2.99
SDC4P31431 MIR154-201ENST00000385243 84 ntBASIC-3.62□□□□□ -2.99
SDC4P31431 RNU6-345P-201ENST00000517001 107 ntBASIC-3.62□□□□□ -2.99
SDC4P31431 AC006160.2-201ENST00000637708 154 ntBASIC-3.62□□□□□ -2.99
SDC4P31431 RNU6-797P-201ENST00000363101 109 ntBASIC-3.63□□□□□ -2.99
SDC4P31431 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.63□□□□□ -2.99
SDC4P31431 RNU7-200P-201ENST00000516105 62 ntBASIC-3.63□□□□□ -2.99
SDC4P31431 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.63□□□□□ -2.99
SDC4P31431 RNU6-176P-201ENST00000517196 105 ntBASIC-3.63□□□□□ -2.99
SDC4P31431 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.64□□□□□ -2.99
SDC4P31431 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.64□□□□□ -2.99
SDC4P31431 SNORD45.2-201ENST00000363552 72 ntBASIC-3.64□□□□□ -2.99
SDC4P31431 RNU6-196P-201ENST00000384315 107 ntBASIC-3.64□□□□□ -2.99
SDC4P31431 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.65□□□□□ -2.99
SDC4P31431 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.65□□□□□ -2.99
SDC4P31431 RNU6-346P-201ENST00000516288 111 ntBASIC-3.65□□□□□ -2.99
SDC4P31431 AL353621.2-201ENST00000605340 133 ntBASIC-3.65□□□□□ -2.99
SDC4P31431 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.66□□□□□ -3
SDC4P31431 RNU6-800P-201ENST00000384473 103 ntBASIC-3.66□□□□□ -3
SDC4P31431 RNU6-70P-201ENST00000516438 60 ntBASIC-3.66□□□□□ -3
SDC4P31431 RNU6-742P-201ENST00000365289 107 ntBASIC-3.67□□□□□ -3
SDC4P31431 RNU6-738P-201ENST00000384531 106 ntBASIC-3.67□□□□□ -3
SDC4P31431 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.68□□□□□ -3
SDC4P31431 MIR4503-201ENST00000582187 83 ntBASIC-3.68□□□□□ -3
SDC4P31431 MALAT1.1-201ENST00000618249 95 ntBASIC-3.68□□□□□ -3
SDC4P31431 MIR2052-201ENST00000636055 55 ntBASIC-3.68□□□□□ -3
SDC4P31431 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.69□□□□□ -3
SDC4P31431 RNU6-315P-201ENST00000362666 107 ntBASIC-3.7□□□□□ -3
SDC4P31431 SNORD116-14-201ENST00000383894 92 ntBASIC-3.71□□□□□ -3
SDC4P31431 SNORD116-17-201ENST00000383929 92 ntBASIC-3.71□□□□□ -3
SDC4P31431 SNORD116-15-201ENST00000384445 92 ntBASIC-3.71□□□□□ -3
SDC4P31431 SNORD116-19-201ENST00000384729 92 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.71□□□□□ -3
SDC4P31431 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.71□□□□□ -3
SDC4P31431 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.72□□□□□ -3
SDC4P31431 RNU6-886P-201ENST00000384319 105 ntBASIC-3.73□□□□□ -3.01
SDC4P31431 RNU6-675P-201ENST00000384236 104 ntBASIC-3.74□□□□□ -3.01
SDC4P31431 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.74□□□□□ -3.01
SDC4P31431 RNU6-379P-201ENST00000363813 104 ntBASIC-3.75□□□□□ -3.01
SDC4P31431 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.75□□□□□ -3.01
SDC4P31431 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.75□□□□□ -3.01
SDC4P31431 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.75□□□□□ -3.01
SDC4P31431 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.75□□□□□ -3.01
SDC4P31431 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.76□□□□□ -3.01
SDC4P31431 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.76□□□□□ -3.01
SDC4P31431 RNU6-388P-201ENST00000517012 105 ntBASIC-3.76□□□□□ -3.01
SDC4P31431 RNU6-389P-201ENST00000517048 105 ntBASIC-3.76□□□□□ -3.01
SDC4P31431 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.77□□□□□ -3.01
SDC4P31431 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.77□□□□□ -3.01
SDC4P31431 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.78□□□□□ -3.01
SDC4P31431 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.78□□□□□ -3.01
SDC4P31431 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.78□□□□□ -3.01
SDC4P31431 MIR4801-201ENST00000582704 82 ntBASIC-3.78□□□□□ -3.01
SDC4P31431 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.79□□□□□ -3.02
SDC4P31431 RNU6-122P-201ENST00000516818 107 ntBASIC-3.79□□□□□ -3.02
SDC4P31431 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.8□□□□□ -3.02
SDC4P31431 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.8□□□□□ -3.02
SDC4P31431 MIR3134-201ENST00000579433 74 ntBASIC-3.8□□□□□ -3.02
SDC4P31431 AL359920.1-201ENST00000618332 176 ntBASIC-3.8□□□□□ -3.02
SDC4P31431 MIR450A1-201ENST00000362262 91 ntBASIC-3.81□□□□□ -3.02
SDC4P31431 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.81□□□□□ -3.02
SDC4P31431 RNU6-737P-201ENST00000365370 107 ntBASIC-3.81□□□□□ -3.02
SDC4P31431 RNU6-687P-201ENST00000516443 89 ntBASIC-3.81□□□□□ -3.02
SDC4P31431 RNU7-119P-201ENST00000459279 63 ntBASIC-3.82□□□□□ -3.02
SDC4P31431 RNU6-803P-201ENST00000516034 102 ntBASIC-3.82□□□□□ -3.02
SDC4P31431 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.82□□□□□ -3.02
SDC4P31431 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.83□□□□□ -3.02
SDC4P31431 SNORA25.5-201ENST00000363782 126 ntBASIC-3.83□□□□□ -3.02
SDC4P31431 MIR488-201ENST00000365739 83 ntBASIC-3.83□□□□□ -3.02
SDC4P31431 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.83□□□□□ -3.02
SDC4P31431 RNU6-419P-201ENST00000517030 63 ntBASIC-3.83□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 315.6 ms