Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.44□□□□□ -2.48
COL5A1P20908 MIR1285-2-201ENST00000408311 88 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 AC114801.3-201ENST00000510231 177 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 MIR6738-201ENST00000619620 64 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 RNU6-520P-201ENST00000384717 104 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 MIR587-201ENST00000384845 96 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 MIR7978-201ENST00000636158 59 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 MIR5683-201ENST00000636514 76 ntBASIC-0.45□□□□□ -2.48
COL5A1P20908 RNU6-247P-201ENST00000362636 107 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 MIR507-201ENST00000385234 94 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 AC018880.2-201ENST00000414265 201 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 RNU6-732P-201ENST00000516033 103 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 MIR378F-201ENST00000578143 78 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 MIR3170-201ENST00000582699 77 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 MIR6818-201ENST00000621576 65 ntBASIC-0.46□□□□□ -2.48
COL5A1P20908 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.47□□□□□ -2.48
COL5A1P20908 snoU83B.1-201ENST00000517136 88 ntBASIC-0.47□□□□□ -2.48
COL5A1P20908 MIR4306-201ENST00000583390 91 ntBASIC-0.47□□□□□ -2.48
COL5A1P20908 MIR4324-201ENST00000584846 72 ntBASIC-0.47□□□□□ -2.48
COL5A1P20908 MIR4441-201ENST00000582623 100 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 U6.111-201ENST00000636093 83 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 RNU6-669P-201ENST00000365575 107 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 MIR29B1-201ENST00000385015 81 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 SNORA40B-201ENST00000385573 128 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 RNU7-119P-201ENST00000459279 63 ntBASIC-0.48□□□□□ -2.49
COL5A1P20908 RNU6-800P-201ENST00000384473 103 ntBASIC-0.49□□□□□ -2.49
COL5A1P20908 MIR147A-201ENST00000385079 72 ntBASIC-0.49□□□□□ -2.49
COL5A1P20908 SNORD116.2-201ENST00000391251 93 ntBASIC-0.49□□□□□ -2.49
COL5A1P20908 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 RNU6-172P-201ENST00000411000 93 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 RNU6-810P-201ENST00000364001 107 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 RNU6-598P-201ENST00000364017 105 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 MIR579-201ENST00000385221 98 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 RNU6-576P-201ENST00000390854 102 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 RNU6-995P-201ENST00000391244 107 ntBASIC-0.5□□□□□ -2.49
COL5A1P20908 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.51□□□□□ -2.49
COL5A1P20908 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.51□□□□□ -2.49
COL5A1P20908 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.51□□□□□ -2.49
COL5A1P20908 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.51□□□□□ -2.49
COL5A1P20908 MIR7110-201ENST00000612638 86 ntBASIC-0.51□□□□□ -2.49
COL5A1P20908 RNU6-706P-201ENST00000517229 104 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 MIR3115-201ENST00000577915 68 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 AC139453.2-201ENST00000487255 133 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 RNU6-638P-201ENST00000516582 104 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 RNU7-160P-201ENST00000516660 62 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 SNORA40.16-201ENST00000517238 121 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 MIR23C-201ENST00000579846 100 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 MIR4499-201ENST00000584834 69 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.52□□□□□ -2.49
COL5A1P20908 RNU6-164P-201ENST00000364604 103 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 RNU6-608P-201ENST00000383927 104 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 MIR520D-201ENST00000385002 87 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 AC090616.4-201ENST00000448026 115 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 RNU7-134P-201ENST00000458997 64 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 AC120024.2-201ENST00000576526 175 ntBASIC-0.53□□□□□ -2.49
COL5A1P20908 RNA5SP26-201ENST00000362406 119 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 RNU6-231P-201ENST00000517122 103 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 SNORA27.2-201ENST00000363365 126 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 RNU6-974P-201ENST00000384099 108 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 MIR125B1-201ENST00000385236 88 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 AC125388.1-201ENST00000459631 156 ntBASIC-0.54□□□□□ -2.5
COL5A1P20908 SNORD45.2-201ENST00000363552 72 ntBASIC-0.55□□□□□ -2.5
COL5A1P20908 MIR548X-201ENST00000580069 75 ntBASIC-0.55□□□□□ -2.5
COL5A1P20908 RNU6-79P-201ENST00000362511 107 ntBASIC-0.56□□□□□ -2.5
COL5A1P20908 AL500527.2-201ENST00000454105 95 ntBASIC-0.56□□□□□ -2.5
COL5A1P20908 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.56□□□□□ -2.5
COL5A1P20908 RNU6-122P-201ENST00000516818 107 ntBASIC-0.56□□□□□ -2.5
COL5A1P20908 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 SNORD60-201ENST00000383903 83 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 SNORD63.2-201ENST00000516303 64 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 MIR466-201ENST00000580653 84 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 MIR1246-201ENST00000636535 73 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 RNU6-119P-201ENST00000364882 107 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
COL5A1P20908 RPL35AP4-201ENST00000412007 102 ntBASIC-0.57□□□□□ -2.5
COL5A1P20908 RNY4P27-201ENST00000363341 96 ntBASIC-0.58□□□□□ -2.5
COL5A1P20908 RNU6-419P-201ENST00000517030 63 ntBASIC-0.58□□□□□ -2.5
COL5A1P20908 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.59□□□□□ -2.5
COL5A1P20908 uc_338.19-201ENST00000616808 99 ntBASIC-0.59□□□□□ -2.5
COL5A1P20908 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.59□□□□□ -2.5
COL5A1P20908 RNU6-695P-201ENST00000391157 104 ntBASIC-0.59□□□□□ -2.5
COL5A1P20908 RNU6-361P-201ENST00000364454 107 ntBASIC-0.6□□□□□ -2.51
COL5A1P20908 RNU6-828P-201ENST00000364876 107 ntBASIC-0.6□□□□□ -2.51
COL5A1P20908 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.6□□□□□ -2.51
COL5A1P20908 RNU6-499P-201ENST00000365615 107 ntBASIC-0.61□□□□□ -2.51
COL5A1P20908 MIR4770-201ENST00000579149 58 ntBASIC-0.61□□□□□ -2.51
COL5A1P20908 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.61□□□□□ -2.51
COL5A1P20908 RNU6-258P-201ENST00000390884 101 ntBASIC-0.62□□□□□ -2.51
COL5A1P20908 MIR8485-201ENST00000401372 91 ntBASIC-0.62□□□□□ -2.51
COL5A1P20908 RNY3P8-201ENST00000411366 126 ntBASIC-0.62□□□□□ -2.51
COL5A1P20908 AC138207.3-201ENST00000585289 166 ntBASIC-0.62□□□□□ -2.51
COL5A1P20908 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.63□□□□□ -2.51
COL5A1P20908 HLA-S-202ENST00000425174 53 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms