Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR1285-2-201ENST00000408311 88 ntBASIC-1.43□□□□□ -2.64
PDGFRAP16234 RNU6-634P-201ENST00000459134 106 ntBASIC-1.43□□□□□ -2.64
PDGFRAP16234 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
PDGFRAP16234 RNY4P29-201ENST00000410801 97 ntBASIC-1.44□□□□□ -2.64
PDGFRAP16234 MIR487B-201ENST00000385021 84 ntBASIC-1.45□□□□□ -2.64
PDGFRAP16234 RNU6-92P-201ENST00000605893 104 ntBASIC-1.45□□□□□ -2.64
PDGFRAP16234 RNU6-573P-201ENST00000383938 106 ntBASIC-1.46□□□□□ -2.64
PDGFRAP16234 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.46□□□□□ -2.64
PDGFRAP16234 RNU6-172P-201ENST00000411000 93 ntBASIC-1.46□□□□□ -2.64
PDGFRAP16234 RNU6-228P-201ENST00000362700 106 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 SNORA26.2-201ENST00000390922 122 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 AC018880.2-201ENST00000414265 201 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 RNU7-151P-201ENST00000516930 53 ntBASIC-1.47□□□□□ -2.64
PDGFRAP16234 RNU6-247P-201ENST00000362636 107 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 RNU6-663P-201ENST00000391105 106 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 RNU6-995P-201ENST00000391244 107 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 AC108019.1-201ENST00000512540 175 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 RNU6-523P-201ENST00000516304 54 ntBASIC-1.48□□□□□ -2.65
PDGFRAP16234 MIR579-201ENST00000385221 98 ntBASIC-1.49□□□□□ -2.65
PDGFRAP16234 RNU6-258P-201ENST00000390884 101 ntBASIC-1.49□□□□□ -2.65
PDGFRAP16234 MIR1255A-201ENST00000408338 113 ntBASIC-1.49□□□□□ -2.65
PDGFRAP16234 RNU6-857P-201ENST00000515893 110 ntBASIC-1.49□□□□□ -2.65
PDGFRAP16234 SNORD60.1-201ENST00000362451 73 ntBASIC-1.5□□□□□ -2.65
PDGFRAP16234 MIR4441-201ENST00000582623 100 ntBASIC-1.5□□□□□ -2.65
PDGFRAP16234 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.5□□□□□ -2.65
PDGFRAP16234 RNU6-79P-201ENST00000362511 107 ntBASIC-1.51□□□□□ -2.65
PDGFRAP16234 RNU6-279P-201ENST00000391297 101 ntBASIC-1.51□□□□□ -2.65
PDGFRAP16234 MIR7978-201ENST00000636158 59 ntBASIC-1.51□□□□□ -2.65
PDGFRAP16234 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.52□□□□□ -2.65
PDGFRAP16234 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.52□□□□□ -2.65
PDGFRAP16234 RNU6-400P-201ENST00000391173 106 ntBASIC-1.52□□□□□ -2.65
PDGFRAP16234 MIR4756-201ENST00000577874 78 ntBASIC-1.52□□□□□ -2.65
PDGFRAP16234 MIR664B-201ENST00000626756 61 ntBASIC-1.52□□□□□ -2.65
PDGFRAP16234 MIR365A-201ENST00000362260 87 ntBASIC-1.53□□□□□ -2.65
PDGFRAP16234 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.53□□□□□ -2.65
PDGFRAP16234 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.53□□□□□ -2.65
PDGFRAP16234 MIR125B1-201ENST00000385236 88 ntBASIC-1.53□□□□□ -2.65
PDGFRAP16234 MIR23C-201ENST00000579846 100 ntBASIC-1.53□□□□□ -2.65
PDGFRAP16234 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
PDGFRAP16234 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.55□□□□□ -2.66
PDGFRAP16234 SNORA25.4-201ENST00000363666 124 ntBASIC-1.55□□□□□ -2.66
PDGFRAP16234 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.55□□□□□ -2.66
PDGFRAP16234 SNORD63.2-201ENST00000516303 64 ntBASIC-1.55□□□□□ -2.66
PDGFRAP16234 U4.2-201ENST00000618561 85 ntBASIC-1.55□□□□□ -2.66
PDGFRAP16234 RNU6-669P-201ENST00000365575 107 ntBASIC-1.56□□□□□ -2.66
PDGFRAP16234 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.56□□□□□ -2.66
PDGFRAP16234 SNORD30.1-201ENST00000391309 70 ntBASIC-1.56□□□□□ -2.66
PDGFRAP16234 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.57□□□□□ -2.66
PDGFRAP16234 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.57□□□□□ -2.66
PDGFRAP16234 RNU6-871P-201ENST00000516122 100 ntBASIC-1.57□□□□□ -2.66
PDGFRAP16234 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.57□□□□□ -2.66
PDGFRAP16234 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.57□□□□□ -2.66
PDGFRAP16234 SNORD78.1-201ENST00000390866 65 ntBASIC-1.58□□□□□ -2.66
PDGFRAP16234 RNA5SP225-201ENST00000410874 135 ntBASIC-1.59□□□□□ -2.66
PDGFRAP16234 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.59□□□□□ -2.66
PDGFRAP16234 RNU6-231P-201ENST00000517122 103 ntBASIC-1.59□□□□□ -2.66
PDGFRAP16234 AC120024.2-201ENST00000576526 175 ntBASIC-1.59□□□□□ -2.66
PDGFRAP16234 SNORA27.2-201ENST00000363365 126 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 SNORA25.5-201ENST00000363782 126 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 RNU6-563P-201ENST00000364872 108 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 MIR4723-201ENST00000585070 81 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 AC005520.4-201ENST00000604337 90 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 MIR7110-201ENST00000612638 86 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.6□□□□□ -2.67
PDGFRAP16234 RNU7-160P-201ENST00000516660 62 ntBASIC-1.61□□□□□ -2.67
PDGFRAP16234 RNU6-122P-201ENST00000516818 107 ntBASIC-1.61□□□□□ -2.67
PDGFRAP16234 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.62□□□□□ -2.67
PDGFRAP16234 MIR1302-4-201ENST00000408701 150 ntBASIC-1.62□□□□□ -2.67
PDGFRAP16234 U6.111-201ENST00000636093 83 ntBASIC-1.62□□□□□ -2.67
PDGFRAP16234 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.63□□□□□ -2.67
PDGFRAP16234 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.63□□□□□ -2.67
PDGFRAP16234 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.63□□□□□ -2.67
PDGFRAP16234 RNU6-649P-201ENST00000384463 107 ntBASIC-1.63□□□□□ -2.67
PDGFRAP16234 RNU6-810P-201ENST00000364001 107 ntBASIC-1.64□□□□□ -2.67
PDGFRAP16234 RNU6-974P-201ENST00000384099 108 ntBASIC-1.64□□□□□ -2.67
PDGFRAP16234 RNU6-980P-201ENST00000516925 103 ntBASIC-1.64□□□□□ -2.67
PDGFRAP16234 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
PDGFRAP16234 RNU6-841P-201ENST00000383872 107 ntBASIC-1.65□□□□□ -2.67
PDGFRAP16234 RNU6-695P-201ENST00000391157 104 ntBASIC-1.65□□□□□ -2.67
PDGFRAP16234 SNORD116.2-201ENST00000391251 93 ntBASIC-1.65□□□□□ -2.67
PDGFRAP16234 RNU6-539P-201ENST00000516665 103 ntBASIC-1.65□□□□□ -2.67
PDGFRAP16234 MIR4511-201ENST00000582784 87 ntBASIC-1.65□□□□□ -2.67
PDGFRAP16234 RNY4P27-201ENST00000363341 96 ntBASIC-1.66□□□□□ -2.68
PDGFRAP16234 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.66□□□□□ -2.68
PDGFRAP16234 MIR548AM-201ENST00000584298 74 ntBASIC-1.66□□□□□ -2.68
PDGFRAP16234 RNA5SP405-201ENST00000363059 114 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 MIR3123-201ENST00000583417 75 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 MIR4679-1-201ENST00000637619 75 ntBASIC-1.67□□□□□ -2.68
PDGFRAP16234 RNU6-828P-201ENST00000364876 107 ntBASIC-1.68□□□□□ -2.68
PDGFRAP16234 SNORD114-3-201ENST00000364969 75 ntBASIC-1.68□□□□□ -2.68
PDGFRAP16234 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 277.2 ms