Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RNU6-828P-201ENST00000364876 107 ntBASIC-0.2□□□□□ -2.44
ITGB1P05556 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.2□□□□□ -2.44
ITGB1P05556 SNORA26.4-201ENST00000391188 123 ntBASIC-0.2□□□□□ -2.44
ITGB1P05556 SNORD63.2-201ENST00000516303 64 ntBASIC-0.2□□□□□ -2.44
ITGB1P05556 MIR409-201ENST00000362237 79 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 RNU6-247P-201ENST00000362636 107 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 SNORD114-17-201ENST00000364699 75 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 MIR520D-201ENST00000385002 87 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 AC021146.6-201ENST00000514659 117 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 RNA5SP67-201ENST00000516422 131 ntBASIC-0.21□□□□□ -2.44
ITGB1P05556 RNU6-753P-201ENST00000363926 107 ntBASIC-0.23□□□□□ -2.45
ITGB1P05556 SNORD14C-201ENST00000365382 88 ntBASIC-0.23□□□□□ -2.45
ITGB1P05556 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.23□□□□□ -2.45
ITGB1P05556 AL353691.2-201ENST00000443795 59 ntBASIC-0.23□□□□□ -2.45
ITGB1P05556 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.24□□□□□ -2.45
ITGB1P05556 RNU6-258P-201ENST00000390884 101 ntBASIC-0.24□□□□□ -2.45
ITGB1P05556 MIR4436A-201ENST00000585278 85 ntBASIC-0.24□□□□□ -2.45
ITGB1P05556 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
ITGB1P05556 MIR5683-201ENST00000636514 76 ntBASIC-0.24□□□□□ -2.45
ITGB1P05556 MIR224-201ENST00000384889 81 ntBASIC-0.25□□□□□ -2.45
ITGB1P05556 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.26□□□□□ -2.45
ITGB1P05556 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
ITGB1P05556 SNORD114-14-201ENST00000362723 75 ntBASIC-0.27□□□□□ -2.45
ITGB1P05556 SNORA3B-201ENST00000391305 131 ntBASIC-0.27□□□□□ -2.45
ITGB1P05556 RPL35AP4-201ENST00000412007 102 ntBASIC-0.27□□□□□ -2.45
ITGB1P05556 AL451105.1-201ENST00000450005 189 ntBASIC-0.27□□□□□ -2.45
ITGB1P05556 SNORD45.2-201ENST00000363552 72 ntBASIC-0.28□□□□□ -2.45
ITGB1P05556 RNA5SP266-201ENST00000410273 108 ntBASIC-0.28□□□□□ -2.45
ITGB1P05556 RNU4-88P-201ENST00000411220 86 ntBASIC-0.28□□□□□ -2.45
ITGB1P05556 SNORD126-201ENST00000459475 77 ntBASIC-0.28□□□□□ -2.45
ITGB1P05556 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
ITGB1P05556 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.3□□□□□ -2.46
ITGB1P05556 MIR548AX-201ENST00000580117 73 ntBASIC-0.3□□□□□ -2.46
ITGB1P05556 RNU6-608P-201ENST00000383927 104 ntBASIC-0.31□□□□□ -2.46
ITGB1P05556 RNU6-284P-201ENST00000411105 106 ntBASIC-0.31□□□□□ -2.46
ITGB1P05556 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.31□□□□□ -2.46
ITGB1P05556 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
ITGB1P05556 MIR507-201ENST00000385234 94 ntBASIC-0.32□□□□□ -2.46
ITGB1P05556 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
ITGB1P05556 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.33□□□□□ -2.46
ITGB1P05556 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.33□□□□□ -2.46
ITGB1P05556 SNORA27.2-201ENST00000363365 126 ntBASIC-0.34□□□□□ -2.46
ITGB1P05556 RNU6-431P-201ENST00000383874 107 ntBASIC-0.34□□□□□ -2.46
ITGB1P05556 MIR1468-201ENST00000410600 86 ntBASIC-0.34□□□□□ -2.46
ITGB1P05556 SNORD114-25-201ENST00000363742 72 ntBASIC-0.35□□□□□ -2.47
ITGB1P05556 SNORA32.3-201ENST00000384772 121 ntBASIC-0.36□□□□□ -2.47
ITGB1P05556 SNORD64-201ENST00000386683 67 ntBASIC-0.36□□□□□ -2.47
ITGB1P05556 RNU6-530P-201ENST00000391180 107 ntBASIC-0.36□□□□□ -2.47
ITGB1P05556 MIR29B1-201ENST00000385015 81 ntBASIC-0.37□□□□□ -2.47
ITGB1P05556 RNY1P9-201ENST00000532431 109 ntBASIC-0.37□□□□□ -2.47
ITGB1P05556 MIR548AZ-201ENST00000616567 95 ntBASIC-0.37□□□□□ -2.47
ITGB1P05556 MIR147A-201ENST00000385079 72 ntBASIC-0.38□□□□□ -2.47
ITGB1P05556 MIR23C-201ENST00000579846 100 ntBASIC-0.38□□□□□ -2.47
ITGB1P05556 MT-TQ-201ENST00000387372 72 ntBASIC-0.39□□□□□ -2.47
ITGB1P05556 RNU6-930P-201ENST00000390938 100 ntBASIC-0.39□□□□□ -2.47
ITGB1P05556 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
ITGB1P05556 SNX3P1X-201ENST00000414887 175 ntBASIC-0.39□□□□□ -2.47
ITGB1P05556 RNA5SP26-201ENST00000362406 119 ntBASIC-0.4□□□□□ -2.47
ITGB1P05556 RNY3P8-201ENST00000411366 126 ntBASIC-0.41□□□□□ -2.48
ITGB1P05556 RNU6-838P-201ENST00000363399 108 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 AC090616.4-201ENST00000448026 115 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 AL500527.2-201ENST00000454105 95 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 RNU7-134P-201ENST00000458997 64 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 MIR4723-201ENST00000585070 81 ntBASIC-0.42□□□□□ -2.48
ITGB1P05556 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.43□□□□□ -2.48
ITGB1P05556 MIR548F3-201ENST00000408509 87 ntBASIC-0.44□□□□□ -2.48
ITGB1P05556 MIR382-201ENST00000637119 76 ntBASIC-0.44□□□□□ -2.48
ITGB1P05556 RNU6-742P-201ENST00000365289 107 ntBASIC-0.45□□□□□ -2.48
ITGB1P05556 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.45□□□□□ -2.48
ITGB1P05556 MIR548AL-201ENST00000578416 97 ntBASIC-0.46□□□□□ -2.48
ITGB1P05556 RNU6-563P-201ENST00000364872 108 ntBASIC-0.47□□□□□ -2.48
ITGB1P05556 MIR202-201ENST00000362219 110 ntBASIC-0.49□□□□□ -2.49
ITGB1P05556 RNU6-361P-201ENST00000364454 107 ntBASIC-0.49□□□□□ -2.49
ITGB1P05556 AC013734.1-201ENST00000619329 111 ntBASIC-0.49□□□□□ -2.49
ITGB1P05556 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.5□□□□□ -2.49
ITGB1P05556 MIR6818-201ENST00000621576 65 ntBASIC-0.5□□□□□ -2.49
ITGB1P05556 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.51□□□□□ -2.49
ITGB1P05556 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.51□□□□□ -2.49
ITGB1P05556 snoU83B.1-201ENST00000517136 88 ntBASIC-0.51□□□□□ -2.49
ITGB1P05556 MIR4426-201ENST00000640330 63 ntBASIC-0.51□□□□□ -2.49
ITGB1P05556 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.52□□□□□ -2.49
ITGB1P05556 AC120024.2-201ENST00000576526 175 ntBASIC-0.52□□□□□ -2.49
ITGB1P05556 MIR3681-201ENST00000580089 72 ntBASIC-0.52□□□□□ -2.49
ITGB1P05556 U6.97-201ENST00000636904 101 ntBASIC-0.52□□□□□ -2.49
ITGB1P05556 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.53□□□□□ -2.49
ITGB1P05556 MIR545-201ENST00000385085 106 ntBASIC-0.53□□□□□ -2.49
ITGB1P05556 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.53□□□□□ -2.49
ITGB1P05556 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.53□□□□□ -2.49
ITGB1P05556 MIR196A1-201ENST00000388006 70 ntBASIC-0.54□□□□□ -2.5
ITGB1P05556 RNU6-176P-201ENST00000517196 105 ntBASIC-0.54□□□□□ -2.5
ITGB1P05556 RNU6-986P-201ENST00000363133 102 ntBASIC-0.55□□□□□ -2.5
ITGB1P05556 SNORD60-201ENST00000383903 83 ntBASIC-0.55□□□□□ -2.5
ITGB1P05556 MIR6874-201ENST00000635894 71 ntBASIC-0.55□□□□□ -2.5
ITGB1P05556 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.56□□□□□ -2.5
ITGB1P05556 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.56□□□□□ -2.5
ITGB1P05556 SNORA17.4-201ENST00000391287 132 ntBASIC-0.56□□□□□ -2.5
ITGB1P05556 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.56□□□□□ -2.5
ITGB1P05556 MIR587-201ENST00000384845 96 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms