Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RNA5SP331-201ENST00000364986 107 ntBASIC-0.5□□□□□ -2.49
LMX1BO60663 SNORA40B-201ENST00000385573 128 ntBASIC-0.5□□□□□ -2.49
LMX1BO60663 AC079150.2-201ENST00000443733 78 ntBASIC-0.5□□□□□ -2.49
LMX1BO60663 MIR5683-201ENST00000636514 76 ntBASIC-0.5□□□□□ -2.49
LMX1BO60663 RNU6-499P-201ENST00000365615 107 ntBASIC-0.52□□□□□ -2.49
LMX1BO60663 SNORA32.3-201ENST00000384772 121 ntBASIC-0.52□□□□□ -2.49
LMX1BO60663 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
LMX1BO60663 RNU6-258P-201ENST00000390884 101 ntBASIC-0.52□□□□□ -2.49
LMX1BO60663 MIR548Q-201ENST00000408404 100 ntBASIC-0.52□□□□□ -2.49
LMX1BO60663 RNU7-160P-201ENST00000516660 62 ntBASIC-0.52□□□□□ -2.49
LMX1BO60663 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.53□□□□□ -2.49
LMX1BO60663 RNU6-974P-201ENST00000384099 108 ntBASIC-0.53□□□□□ -2.49
LMX1BO60663 RNU4-63P-201ENST00000411313 118 ntBASIC-0.53□□□□□ -2.49
LMX1BO60663 SNORD64-201ENST00000386683 67 ntBASIC-0.54□□□□□ -2.5
LMX1BO60663 MIR548AX-201ENST00000580117 73 ntBASIC-0.54□□□□□ -2.5
LMX1BO60663 RNU6-608P-201ENST00000383927 104 ntBASIC-0.55□□□□□ -2.5
LMX1BO60663 RNU6-995P-201ENST00000391244 107 ntBASIC-0.55□□□□□ -2.5
LMX1BO60663 RNA5SP26-201ENST00000362406 119 ntBASIC-0.56□□□□□ -2.5
LMX1BO60663 RNA5SP266-201ENST00000410273 108 ntBASIC-0.56□□□□□ -2.5
LMX1BO60663 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.58□□□□□ -2.5
LMX1BO60663 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.58□□□□□ -2.5
LMX1BO60663 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.58□□□□□ -2.5
LMX1BO60663 SNORD114-25-201ENST00000363742 72 ntBASIC-0.59□□□□□ -2.5
LMX1BO60663 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.59□□□□□ -2.5
LMX1BO60663 MIR382-201ENST00000637119 76 ntBASIC-0.59□□□□□ -2.5
LMX1BO60663 SNORD63.2-201ENST00000516303 64 ntBASIC-0.6□□□□□ -2.51
LMX1BO60663 MIR507-201ENST00000385234 94 ntBASIC-0.61□□□□□ -2.51
LMX1BO60663 RPL35AP4-201ENST00000412007 102 ntBASIC-0.61□□□□□ -2.51
LMX1BO60663 RNY1P9-201ENST00000532431 109 ntBASIC-0.61□□□□□ -2.51
LMX1BO60663 RNU6-828P-201ENST00000364876 107 ntBASIC-0.62□□□□□ -2.51
LMX1BO60663 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.62□□□□□ -2.51
LMX1BO60663 MT-TQ-201ENST00000387372 72 ntBASIC-0.62□□□□□ -2.51
LMX1BO60663 AL500527.2-201ENST00000454105 95 ntBASIC-0.62□□□□□ -2.51
LMX1BO60663 RNU6-419P-201ENST00000517030 63 ntBASIC-0.63□□□□□ -2.51
LMX1BO60663 RNU6-247P-201ENST00000362636 107 ntBASIC-0.64□□□□□ -2.51
LMX1BO60663 AC090616.4-201ENST00000448026 115 ntBASIC-0.64□□□□□ -2.51
LMX1BO60663 MIR29B1-201ENST00000385015 81 ntBASIC-0.65□□□□□ -2.51
LMX1BO60663 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
LMX1BO60663 MIR548X-201ENST00000580069 75 ntBASIC-0.65□□□□□ -2.51
LMX1BO60663 MIR6818-201ENST00000621576 65 ntBASIC-0.65□□□□□ -2.51
LMX1BO60663 SNORA27.2-201ENST00000363365 126 ntBASIC-0.66□□□□□ -2.52
LMX1BO60663 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.66□□□□□ -2.52
LMX1BO60663 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
LMX1BO60663 RNU6-980P-201ENST00000516925 103 ntBASIC-0.67□□□□□ -2.52
LMX1BO60663 MIR1468-201ENST00000410600 86 ntBASIC-0.68□□□□□ -2.52
LMX1BO60663 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.68□□□□□ -2.52
LMX1BO60663 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.69□□□□□ -2.52
LMX1BO60663 AL451105.1-201ENST00000450005 189 ntBASIC-0.69□□□□□ -2.52
LMX1BO60663 RNU7-134P-201ENST00000458997 64 ntBASIC-0.69□□□□□ -2.52
LMX1BO60663 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.69□□□□□ -2.52
LMX1BO60663 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.7□□□□□ -2.52
LMX1BO60663 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.7□□□□□ -2.52
LMX1BO60663 snoU83B.1-201ENST00000517136 88 ntBASIC-0.71□□□□□ -2.52
LMX1BO60663 SNX3P1X-201ENST00000414887 175 ntBASIC-0.72□□□□□ -2.52
LMX1BO60663 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.73□□□□□ -2.53
LMX1BO60663 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.73□□□□□ -2.53
LMX1BO60663 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
LMX1BO60663 RNY3P8-201ENST00000411366 126 ntBASIC-0.75□□□□□ -2.53
LMX1BO60663 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.75□□□□□ -2.53
LMX1BO60663 RNU4-33P-201ENST00000364316 85 ntBASIC-0.76□□□□□ -2.53
LMX1BO60663 RNU6-164P-201ENST00000364604 103 ntBASIC-0.76□□□□□ -2.53
LMX1BO60663 RNU6-614P-201ENST00000384369 107 ntBASIC-0.77□□□□□ -2.53
LMX1BO60663 MIR23C-201ENST00000579846 100 ntBASIC-0.77□□□□□ -2.53
LMX1BO60663 MIR4499-201ENST00000584834 69 ntBASIC-0.77□□□□□ -2.53
LMX1BO60663 U6.59-201ENST00000615686 107 ntBASIC-0.77□□□□□ -2.53
LMX1BO60663 MTND4LP19-201ENST00000403051 166 ntBASIC-0.78□□□□□ -2.53
LMX1BO60663 RNU6-563P-201ENST00000364872 108 ntBASIC-0.79□□□□□ -2.54
LMX1BO60663 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.79□□□□□ -2.54
LMX1BO60663 RNU6-530P-201ENST00000391180 107 ntBASIC-0.79□□□□□ -2.54
LMX1BO60663 SNORD45.2-201ENST00000363552 72 ntBASIC-0.8□□□□□ -2.54
LMX1BO60663 MIR587-201ENST00000384845 96 ntBASIC-0.8□□□□□ -2.54
LMX1BO60663 SNORD83B-201ENST00000386745 93 ntBASIC-0.8□□□□□ -2.54
LMX1BO60663 AC120024.2-201ENST00000576526 175 ntBASIC-0.8□□□□□ -2.54
LMX1BO60663 AC013734.1-201ENST00000619329 111 ntBASIC-0.8□□□□□ -2.54
LMX1BO60663 RNU6-79P-201ENST00000362511 107 ntBASIC-0.81□□□□□ -2.54
LMX1BO60663 RNU6-361P-201ENST00000364454 107 ntBASIC-0.81□□□□□ -2.54
LMX1BO60663 RNU6-936P-201ENST00000384005 107 ntBASIC-0.81□□□□□ -2.54
LMX1BO60663 RNU6-742P-201ENST00000365289 107 ntBASIC-0.82□□□□□ -2.54
LMX1BO60663 uc_338.19-201ENST00000616808 99 ntBASIC-0.82□□□□□ -2.54
LMX1BO60663 AC091912.2-201ENST00000624798 167 ntBASIC-0.83□□□□□ -2.54
LMX1BO60663 MIR202-201ENST00000362219 110 ntBASIC-0.84□□□□□ -2.54
LMX1BO60663 AC018880.2-201ENST00000414265 201 ntBASIC-0.84□□□□□ -2.54
LMX1BO60663 MIR4324-201ENST00000584846 72 ntBASIC-0.84□□□□□ -2.54
LMX1BO60663 MIR6874-201ENST00000635894 71 ntBASIC-0.84□□□□□ -2.54
LMX1BO60663 RNU6-576P-201ENST00000390854 102 ntBASIC-0.86□□□□□ -2.55
LMX1BO60663 RNU6-753P-201ENST00000363926 107 ntBASIC-0.87□□□□□ -2.55
LMX1BO60663 MIR581-201ENST00000384895 96 ntBASIC-0.87□□□□□ -2.55
LMX1BO60663 SNORA17.4-201ENST00000391287 132 ntBASIC-0.87□□□□□ -2.55
LMX1BO60663 MIR8485-201ENST00000401372 91 ntBASIC-0.87□□□□□ -2.55
LMX1BO60663 MIR4723-201ENST00000585070 81 ntBASIC-0.87□□□□□ -2.55
LMX1BO60663 SCARNA17-201ENST00000516183 144 ntBASIC-0.88□□□□□ -2.55
LMX1BO60663 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.88□□□□□ -2.55
LMX1BO60663 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.89□□□□□ -2.55
LMX1BO60663 MIR548N-201ENST00000408742 75 ntBASIC-0.89□□□□□ -2.55
LMX1BO60663 MIR4320-201ENST00000636981 65 ntBASIC-0.89□□□□□ -2.55
LMX1BO60663 MIR4426-201ENST00000640330 63 ntBASIC-0.89□□□□□ -2.55
LMX1BO60663 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.9□□□□□ -2.55
LMX1BO60663 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.9□□□□□ -2.55
LMX1BO60663 RNU6-808P-201ENST00000391233 108 ntBASIC-0.9□□□□□ -2.55
LMX1BO60663 MIR378F-201ENST00000578143 78 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms