Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MIR548AI-201ENST00000579940 88 ntBASIC-1.9□□□□□ -2.71
UPK2O00526 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.91□□□□□ -2.72
UPK2O00526 MALAT1.1-201ENST00000618249 95 ntBASIC-1.91□□□□□ -2.72
UPK2O00526 RNU6-315P-201ENST00000362666 107 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 RNU6-828P-201ENST00000364876 107 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 MIR2052-201ENST00000636055 55 ntBASIC-1.92□□□□□ -2.72
UPK2O00526 RNU6-834P-201ENST00000362367 110 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 SNORD60.1-201ENST00000362451 73 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 RNU6-810P-201ENST00000364001 107 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
UPK2O00526 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 MIR4723-201ENST00000585070 81 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 RNU6-92P-201ENST00000605893 104 ntBASIC-1.93□□□□□ -2.72
UPK2O00526 RNY4P9-201ENST00000363194 97 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-912P-201ENST00000363800 104 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-530P-201ENST00000391180 107 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-789P-201ENST00000517105 102 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-231P-201ENST00000517122 103 ntBASIC-1.94□□□□□ -2.72
UPK2O00526 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.95□□□□□ -2.72
UPK2O00526 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.95□□□□□ -2.72
UPK2O00526 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.95□□□□□ -2.72
UPK2O00526 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.95□□□□□ -2.72
UPK2O00526 MIR7110-201ENST00000612638 86 ntBASIC-1.95□□□□□ -2.72
UPK2O00526 MIR488-201ENST00000365739 83 ntBASIC-1.96□□□□□ -2.72
UPK2O00526 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.96□□□□□ -2.72
UPK2O00526 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.97□□□□□ -2.72
UPK2O00526 MIR1207-201ENST00000408249 87 ntBASIC-1.97□□□□□ -2.72
UPK2O00526 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.97□□□□□ -2.72
UPK2O00526 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.97□□□□□ -2.72
UPK2O00526 RNU6-542P-201ENST00000516405 103 ntBASIC-1.97□□□□□ -2.72
UPK2O00526 MIR379-201ENST00000362218 67 ntBASIC-1.98□□□□□ -2.73
UPK2O00526 RNU6-119P-201ENST00000364882 107 ntBASIC-1.98□□□□□ -2.73
UPK2O00526 SNORA40.16-201ENST00000517238 121 ntBASIC-1.98□□□□□ -2.73
UPK2O00526 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.98□□□□□ -2.73
UPK2O00526 SNORA40B-201ENST00000385573 128 ntBASIC-1.99□□□□□ -2.73
UPK2O00526 MIR450A1-201ENST00000362262 91 ntBASIC-2□□□□□ -2.73
UPK2O00526 Y_RNA.316-201ENST00000365118 111 ntBASIC-2□□□□□ -2.73
UPK2O00526 RNU6-1011P-201ENST00000384668 107 ntBASIC-2□□□□□ -2.73
UPK2O00526 SNX3P1Y-201ENST00000615757 176 ntBASIC-2□□□□□ -2.73
UPK2O00526 RNU6-640P-201ENST00000363693 105 ntBASIC-2.01□□□□□ -2.73
UPK2O00526 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.01□□□□□ -2.73
UPK2O00526 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.01□□□□□ -2.73
UPK2O00526 RNU6-380P-201ENST00000410207 107 ntBASIC-2.02□□□□□ -2.73
UPK2O00526 RNU6-687P-201ENST00000516443 89 ntBASIC-2.02□□□□□ -2.73
UPK2O00526 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.02□□□□□ -2.73
UPK2O00526 RNU6-844P-201ENST00000517175 102 ntBASIC-2.02□□□□□ -2.73
UPK2O00526 MIR4426-201ENST00000640330 63 ntBASIC-2.02□□□□□ -2.73
UPK2O00526 RNU6-590P-201ENST00000365039 107 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 RNU6-959P-201ENST00000384671 107 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 SNORD116.2-201ENST00000391251 93 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 AL451105.1-201ENST00000450005 189 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 SNORA40.13-201ENST00000516379 120 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 RNU6-70P-201ENST00000516438 60 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 MIR4712-201ENST00000583750 82 ntBASIC-2.03□□□□□ -2.73
UPK2O00526 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 RNU6-979P-201ENST00000383896 107 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 MIR154-201ENST00000385243 84 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 AL031737.1-201ENST00000450125 223 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 SNORD54-201ENST00000459159 67 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 MIR3134-201ENST00000579433 74 ntBASIC-2.04□□□□□ -2.74
UPK2O00526 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 MIR5588-201ENST00000581890 63 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 AL365222.1-201ENST00000614661 98 ntBASIC-2.05□□□□□ -2.74
UPK2O00526 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.06□□□□□ -2.74
UPK2O00526 RNU6-895P-201ENST00000384125 103 ntBASIC-2.06□□□□□ -2.74
UPK2O00526 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
UPK2O00526 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.06□□□□□ -2.74
UPK2O00526 RNU6-122P-201ENST00000516818 107 ntBASIC-2.06□□□□□ -2.74
UPK2O00526 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.07□□□□□ -2.74
UPK2O00526 MIR1254-1-201ENST00000408257 97 ntBASIC-2.07□□□□□ -2.74
UPK2O00526 AC008267.6-201ENST00000441664 139 ntBASIC-2.07□□□□□ -2.74
UPK2O00526 RNU6-300P-201ENST00000459080 104 ntBASIC-2.07□□□□□ -2.74
UPK2O00526 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.08□□□□□ -2.74
UPK2O00526 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.08□□□□□ -2.74
UPK2O00526 RNU6-742P-201ENST00000365289 107 ntBASIC-2.08□□□□□ -2.74
UPK2O00526 AL731768.1-201ENST00000603124 139 ntBASIC-2.08□□□□□ -2.74
UPK2O00526 MIR1245B-201ENST00000636115 69 ntBASIC-2.08□□□□□ -2.74
UPK2O00526 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.09□□□□□ -2.74
UPK2O00526 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.09□□□□□ -2.74
UPK2O00526 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.1□□□□□ -2.75
UPK2O00526 RNU7-171P-201ENST00000459581 62 ntBASIC-2.1□□□□□ -2.75
UPK2O00526 RNU6-176P-201ENST00000517196 105 ntBASIC-2.1□□□□□ -2.75
UPK2O00526 RNA5SP93-201ENST00000362525 114 ntBASIC-2.11□□□□□ -2.75
UPK2O00526 SNORA25.5-201ENST00000363782 126 ntBASIC-2.11□□□□□ -2.75
UPK2O00526 RNU6-81P-201ENST00000365608 104 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms